Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:46:32 (109171): wrapper (7.7.26015): starting
00:46:32 (109171): wrapper: running run_atlas (--nthreads 4)
[2025-12-19 00:46:32] Arguments: --nthreads 4
[2025-12-19 00:46:32] Threads: 4
[2025-12-19 00:46:32] Checking for CVMFS
[2025-12-19 00:46:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 00:46:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 00:46:32] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 00:46:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 00:46:33] 2.13.1.0 189701 7212 102076 154169 3 188 8004958 10240001 1822 130560 0 20828380 99.997 267587 249 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-19 00:46:33] CVMFS is ok
[2025-12-19 00:46:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 00:46:33] Checking for apptainer binary...
[2025-12-19 00:46:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 00:46:33] Running /usr/bin/apptainer --version
[2025-12-19 00:46:33] apptainer version 1.4.2
[2025-12-19 00:46:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 00:46:33] julianvlneu
[2025-12-19 00:46:33] apptainer works
[2025-12-19 00:46:33] Set ATHENA_PROC_NUMBER=4
[2025-12-19 00:46:33] Set ATHENA_CORE_NUMBER=4
[2025-12-19 00:46:33] Starting ATLAS job with PandaID=6933834670
[2025-12-19 00:46:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 01:39:55]  *** The last 200 lines of the pilot log: ***
[2025-12-19 01:39:55]  storage_token=
[2025-12-19 01:39:55]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933834670/log.47886933._016000.job.log.tgz.1
[2025-12-19 01:39:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/51/log.47886933._016000.job.log.tgz.1
[2025-12-19 01:39:55]  workdir=None
[2025-12-19 01:39:55] ]
[2025-12-19 01:39:55] 2025-12-19 00:39:14,442 | INFO     | transferring file log.47886933._016000.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933834670/log.47886933._016000.job.log.tgz.1 to /var/li
[2025-12-19 01:39:55] 2025-12-19 00:39:14,442 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933834670/log.47886933._016000.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-19 01:39:55] 2025-12-19 00:39:14,463 | INFO     | adding to output.list: log.47886933._016000.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/51/log.47886933._016000.job.log.tg
[2025-12-19 01:39:55] 2025-12-19 00:39:14,464 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 01:39:55] 2025-12-19 00:39:14,465 | INFO     | summary of transferred files:
[2025-12-19 01:39:55] 2025-12-19 00:39:14,465 | INFO     |  -- lfn=log.47886933._016000.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 01:39:55] 2025-12-19 00:39:14,465 | INFO     | stage-out finished correctly
[2025-12-19 01:39:55] 2025-12-19 00:39:15,756 | INFO     | time since job start (3150s) is within the limit (174528.0s)
[2025-12-19 01:39:55] 2025-12-19 00:39:15,756 | INFO     | 3151s have passed since pilot start - server update state is 'RUNNING'
[2025-12-19 01:39:55] 2025-12-19 00:39:16,747 | WARNING  | process 119646 can no longer be monitored (due to stat problems) - aborting
[2025-12-19 01:39:55] 2025-12-19 00:39:16,747 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933834670/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 01:39:55] 2025-12-19 00:39:16,751 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 01:39:55] 2025-12-19 00:39:16,871 | INFO     | number of running child processes to parent process 119646: 1
[2025-12-19 01:39:55] 2025-12-19 00:39:16,871 | INFO     | maximum number of monitored processes: 6
[2025-12-19 01:39:55] 2025-12-19 00:39:17,331 | INFO     | job 6933834670 has state=finished
[2025-12-19 01:39:55] 2025-12-19 00:39:17,331 | INFO     | preparing for final server update for job 6933834670 in state='finished'
[2025-12-19 01:39:55] 2025-12-19 00:39:17,331 | INFO     | this job has now completed (state=finished)
[2025-12-19 01:39:55] 2025-12-19 00:39:17,331 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 01:39:55] 2025-12-19 00:39:17,331 | INFO     | log transfer has been attempted: DONE
[2025-12-19 01:39:55] 2025-12-19 00:39:17,331 | INFO     | job 6933834670 has finished - writing final server update
[2025-12-19 01:39:55] 2025-12-19 00:39:17,332 | INFO     | total number of processed events: 400 (read)
[2025-12-19 01:39:55] 2025-12-19 00:39:17,332 | INFO     | executing command: lscpu
[2025-12-19 01:39:55] 2025-12-19 00:39:17,356 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 01:39:55] 2025-12-19 00:39:17,764 | INFO     | time since job start (3152s) is within the limit (174528.0s)
[2025-12-19 01:39:55] 2025-12-19 00:39:18,912 | INFO     | PID=113018 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 01:39:55] 2025-12-19 00:39:18,913 | INFO     | .. there are 3 such processes running
[2025-12-19 01:39:55] 2025-12-19 00:39:19,375 | INFO     | monitor loop #242: job 0:6933834670 is in state 'finished'
[2025-12-19 01:39:55] 2025-12-19 00:39:19,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 01:39:55] 2025-12-19 00:39:19,913 | INFO     | time since job start (3154s) is within the limit (174528.0s)
[2025-12-19 01:39:55] 2025-12-19 00:39:21,879 | INFO     | monitor loop #243: job 0:6933834670 is in state 'finished'
[2025-12-19 01:39:55] 2025-12-19 00:39:21,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 01:39:55] 2025-12-19 00:39:21,919 | INFO     | time since job start (3156s) is within the limit (174528.0s)
[2025-12-19 01:39:55] 2025-12-19 00:39:22,896 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-19 01:39:55] 2025-12-19 00:39:22,896 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 4399.884000000001
[2025-12-19 01:39:55] 2025-12-19 00:39:22,898 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933834670/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 01:39:55] 2025-12-19 00:39:22,898 | INFO     | extracted standard info from prmon json
[2025-12-19 01:39:55] 2025-12-19 00:39:22,898 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 01:39:55] 2025-12-19 00:39:22,898 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 01:39:55] 2025-12-19 00:39:22,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 01:39:55] 2025-12-19 00:39:22,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 01:39:55] 2025-12-19 00:39:22,899 | INFO     | fitting pss+swap vs Time
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | sum of square deviations: 28242390.0
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | sum of deviations: -1949034668.0
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | mean x: 1766103282.0
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | mean y: 2377403.7333333334
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | intersect: 121882874199.03218
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | chi2: 0.010422923554050847
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | current memory leak: -69.01 B/s (using 45 data points, chi2=0.01)
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | could have reported an average CPU frequency of 4399 MHz (5 samples)
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | ..............................
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | . Timing measurements:
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | . get job = 0 s
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | . initial setup = 1 s
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | . payload setup = 7 s
[2025-12-19 01:39:55] 2025-12-19 00:39:22,900 | INFO     | . stage-in = 0 s
[2025-12-19 01:39:55] 2025-12-19 00:39:22,901 | INFO     | . payload execution = 3120 s
[2025-12-19 01:39:55] 2025-12-19 00:39:22,901 | INFO     | . stage-out = 0 s
[2025-12-19 01:39:55] 2025-12-19 00:39:22,901 | INFO     | . log creation = 0 s
[2025-12-19 01:39:55] 2025-12-19 00:39:22,901 | INFO     | ..............................
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | 
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | job summary report
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | --------------------------------------------------
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | PanDA job id: 6933834670
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | task id: 47886933
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | errors: (none)
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | pilot state: finished 
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | transexitcode: 0
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | exeerrorcode: 0
[2025-12-19 01:39:55] 2025-12-19 00:39:22,930 | INFO     | exeerrordiag: 
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | exitcode: 0
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | exitmsg: OK
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | cpuconsumptiontime: 11631 s
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | nevents: 400
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | neventsw: 0
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | pid: 119646
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | pgrp: 119646
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | corecount: 4
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | event service: False
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | sizes: {0: 2283983, 5: 2284245, 11: 2284301, 3131: 2309767, 3132: 2309766, 3133: 2318848, 3135: 2319032, 3141: 2319258}
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | --------------------------------------------------
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | 
[2025-12-19 01:39:55] 2025-12-19 00:39:22,931 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-12-19 01:39:55] 2025-12-19 00:39:22,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,952 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,952 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,952 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | job 6933834670 has completed (purged errors)
[2025-12-19 01:39:55] 2025-12-19 00:39:22,953 | INFO     | overall cleanup function is called
[2025-12-19 01:39:55] 2025-12-19 00:39:23,960 | INFO     | --- collectZombieJob: --- 10, [119646]
[2025-12-19 01:39:55] 2025-12-19 00:39:23,960 | INFO     | zombie collector waiting for pid 119646
[2025-12-19 01:39:55] 2025-12-19 00:39:23,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 01:39:55] 2025-12-19 00:39:23,961 | INFO     | collected zombie processes
[2025-12-19 01:39:55] 2025-12-19 00:39:23,961 | INFO     | will attempt to kill all subprocesses of pid=119646
[2025-12-19 01:39:55] 2025-12-19 00:39:24,078 | INFO     | process IDs to be killed: [119646] (in reverse order)
[2025-12-19 01:39:55] 2025-12-19 00:39:24,139 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 01:39:55] 2025-12-19 00:39:24,140 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 01:39:55] 2025-12-19 00:39:24,143 | INFO     | did not find any defunct processes belonging to 119646
[2025-12-19 01:39:55] 2025-12-19 00:39:24,146 | INFO     | did not find any defunct processes belonging to 119646
[2025-12-19 01:39:55] 2025-12-19 00:39:24,147 | INFO     | ready for new job
[2025-12-19 01:39:55] 2025-12-19 00:39:24,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 01:39:55] 2025-12-19 00:39:24,148 | INFO     | ***************************************
[2025-12-19 01:39:55] 2025-12-19 00:39:24,148 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 01:39:55] 2025-12-19 00:39:24,148 | INFO     | ***************************************
[2025-12-19 01:39:55] 2025-12-19 00:39:24,148 | INFO     | 
[2025-12-19 01:39:55] 2025-12-19 00:39:24,149 | INFO     | pilot is running in a VM
[2025-12-19 01:39:55] 2025-12-19 00:39:24,149 | INFO     | architecture information:
[2025-12-19 01:39:55] 2025-12-19 00:39:24,149 | INFO     | executing command: cat /etc/os-release
[2025-12-19 01:39:55] 2025-12-19 00:39:24,162 | INFO     | cat /etc/os-release:
[2025-12-19 01:39:55] NAME="CentOS Linux"
[2025-12-19 01:39:55] VERSION="7 (Core)"
[2025-12-19 01:39:55] ID="centos"
[2025-12-19 01:39:55] ID_LIKE="rhel fedora"
[2025-12-19 01:39:55] VERSION_ID="7"
[2025-12-19 01:39:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 01:39:55] ANSI_COLOR="0;31"
[2025-12-19 01:39:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 01:39:55] HOME_URL="https://www.centos.org/"
[2025-12-19 01:39:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 01:39:55] 
[2025-12-19 01:39:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 01:39:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 01:39:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 01:39:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 01:39:55] 
[2025-12-19 01:39:55] 2025-12-19 00:39:24,163 | INFO     | ***************************************
[2025-12-19 01:39:55] 2025-12-19 00:39:24,666 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-12-19 01:39:55] 2025-12-19 00:39:24,682 | INFO     | sufficient remaining disk space (146254331904 B)
[2025-12-19 01:39:55] 2025-12-19 00:39:24,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 01:39:55] 2025-12-19 00:39:24,683 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 01:39:55] 2025-12-19 00:39:24,683 | INFO     | update_server=False
[2025-12-19 01:39:55] 2025-12-19 00:39:24,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 01:39:55] 2025-12-19 00:39:24,683 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 01:39:55] 2025-12-19 00:39:24,704 | INFO     | all data control threads have been joined
[2025-12-19 01:39:55] 2025-12-19 00:39:25,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 01:39:55] 2025-12-19 00:39:25,087 | INFO     | all job control threads have been joined
[2025-12-19 01:39:55] 2025-12-19 00:39:25,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 01:39:55] 2025-12-19 00:39:25,389 | INFO     | aborting loop
[2025-12-19 01:39:55] 2025-12-19 00:39:25,475 | INFO     | all payload control threads have been joined
[2025-12-19 01:39:55] 2025-12-19 00:39:25,689 | INFO     | [job] retrieve thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:25,689 | INFO     | [job] queue monitor thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:25,709 | INFO     | [data] control thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:26,093 | INFO     | [job] control thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:26,341 | INFO     | [data] copytool_in thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:26,395 | INFO     | [job] job monitor thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:26,420 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:26,480 | INFO     | [payload] control thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:26,674 | INFO     | [payload] failed_post thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:26,943 | INFO     | [job] validate thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:26,966 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:27,017 | INFO     | [data] copytool_out thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:27,050 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:27,111 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:27,245 | INFO     | [payload] validate_post thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:27,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 01:39:55] 2025-12-19 00:39:31,294 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 01:39:55] 2025-12-19 00:39:49,424 | INFO     | [monitor] cgroup control has ended
[2025-12-19 01:39:55] 2025-12-19 00:39:49,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129114438432576)>', '<ExcThread(monitor, started 129113394231040)>']
[2025-12-19 01:39:55] 2025-12-19 00:39:54,832 | INFO     | all workflow threads have been joined
[2025-12-19 01:39:55] 2025-12-19 00:39:54,832 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 01:39:55] 2025-12-19 00:39:54,832 | INFO     | traces error code: 0
[2025-12-19 01:39:55] 2025-12-19 00:39:54,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 01:39:55] 2025-12-19 00:39:55,139 | INFO     | PID=113018 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-19 01:39:55] 2025-12-19 00:39:55,139 | INFO     | .. there are 3 such processes running
[2025-12-19 01:39:55] 2025-12-19 00:39:55,140 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 01:39:55] 2025-12-19 00:39:55,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 01:39:55] 2025-12-19 00:39:55,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 01:39:55] 2025-12-19 00:39:55,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 01:39:55] 2025-12-19 00:39:55,140 | INFO     | [monitor] control thread has ended
[2025-12-19 01:39:55] 2025-12-19 00:39:55,218 [wrapper] ==== pilot stdout END ====
[2025-12-19 01:39:55] 2025-12-19 00:39:55,222 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 01:39:55] 2025-12-19 00:39:55,227 [wrapper] pilotpid: 113018
[2025-12-19 01:39:55] 2025-12-19 00:39:55,231 [wrapper] Pilot exit status: 0
[2025-12-19 01:39:55] 2025-12-19 00:39:55,250 [wrapper] pandaids: 6933834670
[2025-12-19 01:39:55] 2025-12-19 00:39:55,294 [wrapper] cleanup supervisor_pilot  174347 113019
[2025-12-19 01:39:55] 2025-12-19 00:39:55,299 [wrapper] Test setup, not cleaning
[2025-12-19 01:39:55] 2025-12-19 00:39:55,304 [wrapper] apfmon messages muted
[2025-12-19 01:39:55] 2025-12-19 00:39:55,309 [wrapper] ==== wrapper stdout END ====
[2025-12-19 01:39:55] 2025-12-19 00:39:55,313 [wrapper] ==== wrapper stderr END ====
[2025-12-19 01:39:55]  *** Error codes and diagnostics ***
[2025-12-19 01:39:55]     "exeErrorCode": 0,
[2025-12-19 01:39:55]     "exeErrorDiag": "",
[2025-12-19 01:39:55]     "pilotErrorCode": 0,
[2025-12-19 01:39:55]     "pilotErrorDiag": "",
[2025-12-19 01:39:55]  *** Listing of results directory ***
[2025-12-19 01:39:55] insgesamt 334084
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc    579449 Dez 18 11:44 pilot3.tar.gz
[2025-12-19 01:39:55] -rwx------ 1 yeti boinc     36322 Dez 18 11:47 runpilot2-wrapper.sh
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc      5112 Dez 18 11:50 queuedata.json
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc       100 Dez 19 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 01:39:55] -rwxr-xr-x 1 yeti boinc      7986 Dez 19 00:46 run_atlas
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc       105 Dez 19 00:46 job.xml
[2025-12-19 01:39:55] -rw-r--r-- 2 yeti boinc     15847 Dez 19 00:46 start_atlas.sh
[2025-12-19 01:39:55] drwxrwx--x 2 yeti boinc      4096 Dez 19 00:46 shared
[2025-12-19 01:39:55] -rw-r--r-- 2 yeti boinc    592402 Dez 19 00:46 input.tar.gz
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc      6730 Dez 19 00:46 init_data.xml
[2025-12-19 01:39:55] -rw-r--r-- 2 yeti boinc 189901177 Dez 19 00:46 EVNT.47886929._000661.pool.root.1
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc         0 Dez 19 00:46 boinc_setup_complete
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc         0 Dez 19 00:46 boinc_lockfile
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc      2515 Dez 19 00:46 pandaJob.out
[2025-12-19 01:39:55] -rw------- 1 yeti boinc        52 Dez 19 00:46 setup.sh.local
[2025-12-19 01:39:55] -rw------- 1 yeti boinc    988880 Dez 19 00:46 agis_schedconf.cvmfs.json
[2025-12-19 01:39:55] -rw------- 1 yeti boinc   1516240 Dez 19 00:46 agis_ddmendpoints.agis.ALL.json
[2025-12-19 01:39:55] drwx------ 5 yeti boinc      4096 Dez 19 00:46 pilot3
[2025-12-19 01:39:55] -rw------- 1 yeti boinc 146827439 Dez 19 01:38 HITS.47886933._016000.pool.root.1
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc       529 Dez 19 01:39 boinc_task_state.xml
[2025-12-19 01:39:55] -rw------- 1 yeti boinc      1021 Dez 19 01:39 memory_monitor_summary.json
[2025-12-19 01:39:55] -rw------- 1 yeti boinc    235543 Dez 19 01:39 log.47886933._016000.job.log.tgz.1
[2025-12-19 01:39:55] -rw------- 1 yeti boinc        95 Dez 19 01:39 pilot_heartbeat.json
[2025-12-19 01:39:55] -rw------- 1 yeti boinc      7740 Dez 19 01:39 heartbeat.json
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc        27 Dez 19 01:39 wrapper_checkpoint.txt
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc      8192 Dez 19 01:39 boinc_mmap_file
[2025-12-19 01:39:55] -rw------- 1 yeti boinc       821 Dez 19 01:39 pilotlog.txt
[2025-12-19 01:39:55] -rw------- 1 yeti boinc    493767 Dez 19 01:39 log.47886933._016000.job.log.1
[2025-12-19 01:39:55] -rw------- 1 yeti boinc       357 Dez 19 01:39 output.list
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc       620 Dez 19 01:39 runtime_log
[2025-12-19 01:39:55] -rw------- 1 yeti boinc    747520 Dez 19 01:39 result.tar.gz
[2025-12-19 01:39:55] -rw------- 1 yeti boinc       639 Dez 19 01:39 SFHMDmFjQq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAHZKDmDeeAxm.diag
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc      9557 Dez 19 01:39 runtime_log.err
[2025-12-19 01:39:55] -rw-r--r-- 1 yeti boinc     22074 Dez 19 01:39 stderr.txt
[2025-12-19 01:39:55] HITS file was successfully produced:
[2025-12-19 01:39:55] -rw------- 1 yeti boinc 146827439 Dez 19 01:38 shared/HITS.pool.root.1
[2025-12-19 01:39:55]  *** Contents of shared directory: ***
[2025-12-19 01:39:55] insgesamt 330176
[2025-12-19 01:39:55] -rw-r--r-- 2 yeti boinc     15847 Dez 19 00:46 start_atlas.sh
[2025-12-19 01:39:55] -rw-r--r-- 2 yeti boinc    592402 Dez 19 00:46 input.tar.gz
[2025-12-19 01:39:55] -rw-r--r-- 2 yeti boinc 189901177 Dez 19 00:46 ATLAS.root_0
[2025-12-19 01:39:55] -rw------- 1 yeti boinc 146827439 Dez 19 01:38 HITS.pool.root.1
[2025-12-19 01:39:55] -rw------- 1 yeti boinc    747520 Dez 19 01:39 result.tar.gz
01:39:57 (109171): run_atlas exited; CPU time 11703.462998
01:39:57 (109171): called boinc_finish(0)

</stderr_txt>
]]>

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