Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
23:56:10 (57577): wrapper (7.7.26015): starting
23:56:10 (57577): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 23:56:10] Arguments: --nthreads 4
[2025-12-18 23:56:10] Threads: 4
[2025-12-18 23:56:10] Checking for CVMFS
[2025-12-18 23:56:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 23:56:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 23:56:11] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 23:56:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 23:56:11] 2.13.1.0 189701 7162 102804 154167 1 188 7990693 10240001 1822 130560 0 20696624 99.997 264906 247 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-18 23:56:11] CVMFS is ok
[2025-12-18 23:56:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 23:56:11] Checking for apptainer binary...
[2025-12-18 23:56:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 23:56:11] Running /usr/bin/apptainer --version
[2025-12-18 23:56:11] apptainer version 1.4.2
[2025-12-18 23:56:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 23:56:11] julianvlneu
[2025-12-18 23:56:11] apptainer works
[2025-12-18 23:56:11] Set ATHENA_PROC_NUMBER=4
[2025-12-18 23:56:11] Set ATHENA_CORE_NUMBER=4
[2025-12-18 23:56:11] Starting ATLAS job with PandaID=6933465934
[2025-12-18 23:56:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 00:49:35]  *** The last 200 lines of the pilot log: ***
[2025-12-19 00:49:35]  storage_token=
[2025-12-19 00:49:35]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933465934/log.47886933._015333.job.log.tgz.1
[2025-12-19 00:49:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/ee/log.47886933._015333.job.log.tgz.1
[2025-12-19 00:49:35]  workdir=None
[2025-12-19 00:49:35] ]
[2025-12-19 00:49:35] 2025-12-18 23:48:30,327 | INFO     | transferring file log.47886933._015333.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933465934/log.47886933._015333.job.log.tgz.1 to /var/li
[2025-12-19 00:49:35] 2025-12-18 23:48:30,327 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933465934/log.47886933._015333.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-19 00:49:35] 2025-12-18 23:48:30,347 | INFO     | adding to output.list: log.47886933._015333.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/ee/log.47886933._015333.job.log.tg
[2025-12-19 00:49:35] 2025-12-18 23:48:30,348 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 00:49:35] 2025-12-18 23:48:30,348 | INFO     | summary of transferred files:
[2025-12-19 00:49:35] 2025-12-18 23:48:30,348 | INFO     |  -- lfn=log.47886933._015333.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 00:49:35] 2025-12-18 23:48:30,349 | INFO     | stage-out finished correctly
[2025-12-19 00:49:35] 2025-12-18 23:48:31,183 | INFO     | time since job start (3127s) is within the limit (174528.0s)
[2025-12-19 00:49:35] 2025-12-18 23:48:32,132 | INFO     | monitor loop #241: job 0:6933465934 is in state 'finished'
[2025-12-19 00:49:35] 2025-12-18 23:48:32,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 00:49:35] 2025-12-18 23:48:32,671 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 00:49:35] 2025-12-18 23:48:32,694 | INFO     | job 6933465934 has state=finished
[2025-12-19 00:49:35] 2025-12-18 23:48:32,694 | INFO     | preparing for final server update for job 6933465934 in state='finished'
[2025-12-19 00:49:35] 2025-12-18 23:48:32,694 | INFO     | this job has now completed (state=finished)
[2025-12-19 00:49:35] 2025-12-18 23:48:32,694 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 00:49:35] 2025-12-18 23:48:32,695 | INFO     | log transfer has been attempted: DONE
[2025-12-19 00:49:35] 2025-12-18 23:48:32,695 | INFO     | job 6933465934 has finished - writing final server update
[2025-12-19 00:49:35] 2025-12-18 23:48:32,695 | INFO     | total number of processed events: 400 (read)
[2025-12-19 00:49:35] 2025-12-18 23:48:32,696 | INFO     | executing command: lscpu
[2025-12-19 00:49:35] 2025-12-18 23:48:32,718 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 00:49:35] 2025-12-18 23:48:33,190 | INFO     | time since job start (3129s) is within the limit (174528.0s)
[2025-12-19 00:49:35] 2025-12-18 23:48:34,328 | INFO     | PID=61428 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-19 00:49:35] 2025-12-18 23:48:34,329 | INFO     | .. there are 3 such processes running
[2025-12-19 00:49:35] 2025-12-18 23:48:34,636 | INFO     | monitor loop #242: job 0:6933465934 is in state 'finished'
[2025-12-19 00:49:35] 2025-12-18 23:48:34,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 00:49:35] 2025-12-18 23:48:35,329 | INFO     | time since job start (3131s) is within the limit (174528.0s)
[2025-12-19 00:49:35] 2025-12-18 23:48:37,140 | INFO     | monitor loop #243: job 0:6933465934 is in state 'finished'
[2025-12-19 00:49:35] 2025-12-18 23:48:37,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 00:49:35] 2025-12-18 23:48:37,336 | INFO     | time since job start (3133s) is within the limit (174528.0s)
[2025-12-19 00:49:35] 2025-12-18 23:48:37,735 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-19 00:49:35] 2025-12-18 23:48:37,735 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 4399.884000000001
[2025-12-19 00:49:35] 2025-12-18 23:48:37,736 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933465934/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 00:49:35] 2025-12-18 23:48:37,737 | INFO     | extracted standard info from prmon json
[2025-12-19 00:49:35] 2025-12-18 23:48:37,737 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 00:49:35] 2025-12-18 23:48:37,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 00:49:35] 2025-12-18 23:48:37,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 00:49:35] 2025-12-18 23:48:37,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 00:49:35] 2025-12-18 23:48:37,737 | INFO     | fitting pss+swap vs Time
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | sum of square deviations: 26400495.0
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | sum of deviations: -948469815.5
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | mean x: 1766100230.5
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | mean y: 2336457.977272727
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | intersect: 63451630108.60172
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | chi2: 0.009933382300922012
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | current memory leak: -35.93 B/s (using 44 data points, chi2=0.01)
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | could have reported an average CPU frequency of 4399 MHz (5 samples)
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | ..............................
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | . Timing measurements:
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | . get job = 0 s
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | . initial setup = 1 s
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | . payload setup = 7 s
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | . stage-in = 0 s
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | . payload execution = 3097 s
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | . stage-out = 0 s
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | . log creation = 0 s
[2025-12-19 00:49:35] 2025-12-18 23:48:37,738 | INFO     | ..............................
[2025-12-19 00:49:35] 2025-12-18 23:48:37,764 | INFO     | 
[2025-12-19 00:49:35] 2025-12-18 23:48:37,764 | INFO     | job summary report
[2025-12-19 00:49:35] 2025-12-18 23:48:37,764 | INFO     | --------------------------------------------------
[2025-12-19 00:49:35] 2025-12-18 23:48:37,764 | INFO     | PanDA job id: 6933465934
[2025-12-19 00:49:35] 2025-12-18 23:48:37,764 | INFO     | task id: 47886933
[2025-12-19 00:49:35] 2025-12-18 23:48:37,764 | INFO     | errors: (none)
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | pilot state: finished 
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | transexitcode: 0
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | exeerrorcode: 0
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | exeerrordiag: 
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | exitcode: 0
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | exitmsg: OK
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | cpuconsumptiontime: 11498 s
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | nevents: 400
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | neventsw: 0
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | pid: 68069
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | pgrp: 68069
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | corecount: 4
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | event service: False
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | sizes: {0: 2283983, 5: 2284245, 10: 2284301, 3108: 2309669, 3109: 2318695, 3112: 2318751, 3117: 2319105}
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | --------------------------------------------------
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | 
[2025-12-19 00:49:35] 2025-12-18 23:48:37,765 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2025-12-19 00:49:35] 2025-12-18 23:48:37,786 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,786 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,786 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,786 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | job 6933465934 has completed (purged errors)
[2025-12-19 00:49:35] 2025-12-18 23:48:37,787 | INFO     | overall cleanup function is called
[2025-12-19 00:49:35] 2025-12-18 23:48:38,793 | INFO     | --- collectZombieJob: --- 10, [68069]
[2025-12-19 00:49:35] 2025-12-18 23:48:38,794 | INFO     | zombie collector waiting for pid 68069
[2025-12-19 00:49:35] 2025-12-18 23:48:38,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 00:49:35] 2025-12-18 23:48:38,794 | INFO     | collected zombie processes
[2025-12-19 00:49:35] 2025-12-18 23:48:38,794 | INFO     | will attempt to kill all subprocesses of pid=68069
[2025-12-19 00:49:35] 2025-12-18 23:48:38,897 | INFO     | process IDs to be killed: [68069] (in reverse order)
[2025-12-19 00:49:35] 2025-12-18 23:48:38,955 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 00:49:35] 2025-12-18 23:48:38,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 00:49:35] 2025-12-18 23:48:38,959 | INFO     | did not find any defunct processes belonging to 68069
[2025-12-19 00:49:35] 2025-12-18 23:48:38,963 | INFO     | did not find any defunct processes belonging to 68069
[2025-12-19 00:49:35] 2025-12-18 23:48:38,963 | INFO     | ready for new job
[2025-12-19 00:49:35] 2025-12-18 23:48:38,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 00:49:35] 2025-12-18 23:48:38,964 | INFO     | ***************************************
[2025-12-19 00:49:35] 2025-12-18 23:48:38,964 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 00:49:35] 2025-12-18 23:48:38,964 | INFO     | ***************************************
[2025-12-19 00:49:35] 2025-12-18 23:48:38,965 | INFO     | 
[2025-12-19 00:49:35] 2025-12-18 23:48:38,965 | INFO     | pilot is running in a VM
[2025-12-19 00:49:35] 2025-12-18 23:48:38,965 | INFO     | architecture information:
[2025-12-19 00:49:35] 2025-12-18 23:48:38,965 | INFO     | executing command: cat /etc/os-release
[2025-12-19 00:49:35] 2025-12-18 23:48:38,978 | INFO     | cat /etc/os-release:
[2025-12-19 00:49:35] NAME="CentOS Linux"
[2025-12-19 00:49:35] VERSION="7 (Core)"
[2025-12-19 00:49:35] ID="centos"
[2025-12-19 00:49:35] ID_LIKE="rhel fedora"
[2025-12-19 00:49:35] VERSION_ID="7"
[2025-12-19 00:49:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 00:49:35] ANSI_COLOR="0;31"
[2025-12-19 00:49:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 00:49:35] HOME_URL="https://www.centos.org/"
[2025-12-19 00:49:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 00:49:35] 
[2025-12-19 00:49:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 00:49:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 00:49:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 00:49:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 00:49:35] 
[2025-12-19 00:49:35] 2025-12-18 23:48:38,978 | INFO     | ***************************************
[2025-12-19 00:49:35] 2025-12-18 23:48:39,482 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-12-19 00:49:35] 2025-12-18 23:48:39,497 | INFO     | sufficient remaining disk space (146431541248 B)
[2025-12-19 00:49:35] 2025-12-18 23:48:39,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 00:49:35] 2025-12-18 23:48:39,498 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 00:49:35] 2025-12-18 23:48:39,498 | INFO     | update_server=False
[2025-12-19 00:49:35] 2025-12-18 23:48:39,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 00:49:35] 2025-12-18 23:48:39,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 00:49:35] 2025-12-18 23:48:39,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 00:49:35] 2025-12-18 23:48:39,640 | INFO     | all job control threads have been joined
[2025-12-19 00:49:35] 2025-12-18 23:48:39,644 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 00:49:35] 2025-12-18 23:48:39,644 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 00:49:35] 2025-12-18 23:48:39,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 00:49:35] 2025-12-18 23:48:39,644 | INFO     | will abort loop
[2025-12-19 00:49:35] 2025-12-18 23:48:39,684 | INFO     | all payload control threads have been joined
[2025-12-19 00:49:35] 2025-12-18 23:48:39,997 | INFO     | all data control threads have been joined
[2025-12-19 00:49:35] 2025-12-18 23:48:40,504 | INFO     | [job] retrieve thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:40,504 | INFO     | [job] queue monitor thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:40,646 | INFO     | [job] control thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:40,649 | INFO     | [job] job monitor thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:40,690 | INFO     | [payload] control thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:40,817 | INFO     | [data] copytool_in thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:40,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 00:49:35] 2025-12-18 23:48:41,003 | INFO     | [data] control thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:41,012 | INFO     | [payload] failed_post thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:41,385 | INFO     | [job] validate thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:41,416 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:41,479 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:41,522 | INFO     | [payload] validate_post thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:41,783 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:42,900 | INFO     | [data] copytool_out thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:43,505 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:48:49,757 | INFO     | job.realtimelogging is not enabled
[2025-12-19 00:49:35] 2025-12-18 23:48:50,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 00:49:35] 2025-12-18 23:49:10,538 | INFO     | PID=61428 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-19 00:49:35] 2025-12-18 23:49:10,538 | INFO     | .. there are 3 such processes running
[2025-12-19 00:49:35] 2025-12-18 23:49:10,538 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 00:49:35] 2025-12-18 23:49:10,539 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 00:49:35] 2025-12-18 23:49:10,539 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 00:49:35] 2025-12-18 23:49:27,815 | INFO     | [monitor] cgroup control has ended
[2025-12-19 00:49:35] 2025-12-18 23:49:29,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127832160012096)>', '<ExcThread(monitor, started 127831363278592)>']
[2025-12-19 00:49:35] 2025-12-18 23:49:30,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 00:49:35] 2025-12-18 23:49:30,647 | INFO     | [monitor] control thread has ended
[2025-12-19 00:49:35] 2025-12-18 23:49:34,745 | INFO     | all workflow threads have been joined
[2025-12-19 00:49:35] 2025-12-18 23:49:34,746 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 00:49:35] 2025-12-18 23:49:34,746 | INFO     | traces error code: 0
[2025-12-19 00:49:35] 2025-12-18 23:49:34,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 00:49:35] 2025-12-18 23:49:34,814 [wrapper] ==== pilot stdout END ====
[2025-12-19 00:49:35] 2025-12-18 23:49:34,819 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 00:49:35] 2025-12-18 23:49:34,824 [wrapper] pilotpid: 61428
[2025-12-19 00:49:35] 2025-12-18 23:49:34,829 [wrapper] Pilot exit status: 0
[2025-12-19 00:49:35] 2025-12-18 23:49:34,846 [wrapper] pandaids: 6933465934
[2025-12-19 00:49:35] 2025-12-18 23:49:34,897 [wrapper] cleanup supervisor_pilot  106614 61429
[2025-12-19 00:49:35] 2025-12-18 23:49:34,902 [wrapper] Test setup, not cleaning
[2025-12-19 00:49:35] 2025-12-18 23:49:34,907 [wrapper] apfmon messages muted
[2025-12-19 00:49:35] 2025-12-18 23:49:34,911 [wrapper] ==== wrapper stdout END ====
[2025-12-19 00:49:35] 2025-12-18 23:49:34,916 [wrapper] ==== wrapper stderr END ====
[2025-12-19 00:49:35]  *** Error codes and diagnostics ***
[2025-12-19 00:49:35]     "exeErrorCode": 0,
[2025-12-19 00:49:35]     "exeErrorDiag": "",
[2025-12-19 00:49:35]     "pilotErrorCode": 0,
[2025-12-19 00:49:35]     "pilotErrorDiag": "",
[2025-12-19 00:49:35]  *** Listing of results directory ***
[2025-12-19 00:49:35] insgesamt 335188
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc    579449 Dez 18 11:44 pilot3.tar.gz
[2025-12-19 00:49:35] -rwx------ 1 yeti boinc     36322 Dez 18 11:47 runpilot2-wrapper.sh
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc      5112 Dez 18 11:50 queuedata.json
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc       100 Dez 18 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 00:49:35] -rwxr-xr-x 1 yeti boinc      7986 Dez 18 23:56 run_atlas
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc       105 Dez 18 23:56 job.xml
[2025-12-19 00:49:35] -rw-r--r-- 2 yeti boinc     15847 Dez 18 23:56 start_atlas.sh
[2025-12-19 00:49:35] drwxrwx--x 2 yeti boinc      4096 Dez 18 23:56 shared
[2025-12-19 00:49:35] -rw-r--r-- 2 yeti boinc    592400 Dez 18 23:56 input.tar.gz
[2025-12-19 00:49:35] -rw-r--r-- 2 yeti boinc 191502630 Dez 18 23:56 EVNT.47886929._000634.pool.root.1
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc      6730 Dez 18 23:56 init_data.xml
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc         0 Dez 18 23:56 boinc_setup_complete
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc         0 Dez 18 23:56 boinc_lockfile
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc      2515 Dez 18 23:56 pandaJob.out
[2025-12-19 00:49:35] -rw------- 1 yeti boinc        52 Dez 18 23:56 setup.sh.local
[2025-12-19 00:49:35] -rw------- 1 yeti boinc    988880 Dez 18 23:56 agis_schedconf.cvmfs.json
[2025-12-19 00:49:35] -rw------- 1 yeti boinc   1516240 Dez 18 23:56 agis_ddmendpoints.agis.ALL.json
[2025-12-19 00:49:35] drwx------ 5 yeti boinc      4096 Dez 18 23:56 pilot3
[2025-12-19 00:49:35] -rw------- 1 yeti boinc 146318249 Dez 19 00:48 HITS.47886933._015333.pool.root.1
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc       529 Dez 19 00:48 boinc_task_state.xml
[2025-12-19 00:49:35] -rw------- 1 yeti boinc      1015 Dez 19 00:48 memory_monitor_summary.json
[2025-12-19 00:49:35] -rw------- 1 yeti boinc    255445 Dez 19 00:48 log.47886933._015333.job.log.tgz.1
[2025-12-19 00:49:35] -rw------- 1 yeti boinc      7745 Dez 19 00:48 heartbeat.json
[2025-12-19 00:49:35] -rw------- 1 yeti boinc        95 Dez 19 00:49 pilot_heartbeat.json
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc      8192 Dez 19 00:49 boinc_mmap_file
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc        27 Dez 19 00:49 wrapper_checkpoint.txt
[2025-12-19 00:49:35] -rw------- 1 yeti boinc      5156 Dez 19 00:49 pilotlog.txt
[2025-12-19 00:49:35] -rw------- 1 yeti boinc    490908 Dez 19 00:49 log.47886933._015333.job.log.1
[2025-12-19 00:49:35] -rw------- 1 yeti boinc       357 Dez 19 00:49 output.list
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc       620 Dez 19 00:49 runtime_log
[2025-12-19 00:49:35] -rw------- 1 yeti boinc    768000 Dez 19 00:49 result.tar.gz
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc      9557 Dez 19 00:49 runtime_log.err
[2025-12-19 00:49:35] -rw------- 1 yeti boinc       640 Dez 19 00:49 j8QLDmviQq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtEZKDmpcXc9n.diag
[2025-12-19 00:49:35] -rw-r--r-- 1 yeti boinc     21963 Dez 19 00:49 stderr.txt
[2025-12-19 00:49:35] HITS file was successfully produced:
[2025-12-19 00:49:35] -rw------- 1 yeti boinc 146318249 Dez 19 00:48 shared/HITS.pool.root.1
[2025-12-19 00:49:35]  *** Contents of shared directory: ***
[2025-12-19 00:49:35] insgesamt 331260
[2025-12-19 00:49:35] -rw-r--r-- 2 yeti boinc     15847 Dez 18 23:56 start_atlas.sh
[2025-12-19 00:49:35] -rw-r--r-- 2 yeti boinc    592400 Dez 18 23:56 input.tar.gz
[2025-12-19 00:49:35] -rw-r--r-- 2 yeti boinc 191502630 Dez 18 23:56 ATLAS.root_0
[2025-12-19 00:49:35] -rw------- 1 yeti boinc 146318249 Dez 19 00:48 HITS.pool.root.1
[2025-12-19 00:49:35] -rw------- 1 yeti boinc    768000 Dez 19 00:49 result.tar.gz
00:49:36 (57577): run_atlas exited; CPU time 11576.944574
00:49:36 (57577): called boinc_finish(0)

</stderr_txt>
]]>

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