Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:03:44 (4110251): wrapper (7.7.26015): starting
23:03:44 (4110251): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 23:03:44] Arguments: --nthreads 4
[2025-12-18 23:03:44] Threads: 4
[2025-12-18 23:03:44] Checking for CVMFS
[2025-12-18 23:03:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 23:03:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 23:03:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 23:03:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 23:03:45] 2.13.1.0 13397 7493 82980 154165 3 188 9043385 10240000 911 130560 0 10057549 99.950 597881 263 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-18 23:03:45] CVMFS is ok
[2025-12-18 23:03:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 23:03:45] Checking for apptainer binary...
[2025-12-18 23:03:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 23:03:45] Running /usr/bin/apptainer --version
[2025-12-18 23:03:45] apptainer version 1.4.5
[2025-12-18 23:03:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 23:03:45] atlas7l1
[2025-12-18 23:03:45] apptainer works
[2025-12-18 23:03:45] Set ATHENA_PROC_NUMBER=4
[2025-12-18 23:03:45] Set ATHENA_CORE_NUMBER=4
[2025-12-18 23:03:45] Starting ATLAS job with PandaID=6933834520
[2025-12-18 23:03:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 00:40:14]  *** The last 200 lines of the pilot log: ***
[2025-12-19 00:40:14]  lfn=log.47886831._018083.job.log.tgz.1
[2025-12-19 00:40:14]  mtime=0
[2025-12-19 00:40:14]  protocol_id=None
[2025-12-19 00:40:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-19 00:40:14]  replicas=None
[2025-12-19 00:40:14]  scope=mc23_13p6TeV
[2025-12-19 00:40:14]  status=None
[2025-12-19 00:40:14]  status_code=0
[2025-12-19 00:40:14]  storage_token=
[2025-12-19 00:40:14]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933834520/log.47886831._018083.job.log.tgz.1
[2025-12-19 00:40:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/63/log.47886831._018083.job.log.tgz.1
[2025-12-19 00:40:14]  workdir=None
[2025-12-19 00:40:14] ]
[2025-12-19 00:40:14] 2025-12-18 23:39:36,453 | INFO     | transferring file log.47886831._018083.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933834520/log.47886831._018083.job.log.tgz.1 to /var/li
[2025-12-19 00:40:14] 2025-12-18 23:39:36,453 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933834520/log.47886831._018083.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-19 00:40:14] 2025-12-18 23:39:36,465 | INFO     | adding to output.list: log.47886831._018083.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/63/log.47886831._018083.job.log.tg
[2025-12-19 00:40:14] 2025-12-18 23:39:36,467 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-19 00:40:14] 2025-12-18 23:39:36,467 | INFO     | summary of transferred files:
[2025-12-19 00:40:14] 2025-12-18 23:39:36,467 | INFO     |  -- lfn=log.47886831._018083.job.log.tgz.1, status_code=0, status=transferred
[2025-12-19 00:40:14] 2025-12-18 23:39:36,467 | INFO     | stage-out finished correctly
[2025-12-19 00:40:14] 2025-12-18 23:39:37,039 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-19 00:40:14] 2025-12-18 23:39:37,082 | INFO     | time since job start (5744s) is within the limit (174528.0s)
[2025-12-19 00:40:14] 2025-12-18 23:39:38,734 | INFO     | monitor loop #439: job 0:6933834520 is in state 'finished'
[2025-12-19 00:40:14] 2025-12-18 23:39:38,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 00:40:14] 2025-12-18 23:39:39,095 | INFO     | time since job start (5746s) is within the limit (174528.0s)
[2025-12-19 00:40:14] 2025-12-18 23:39:39,251 | INFO     | job 6933834520 has state=finished
[2025-12-19 00:40:14] 2025-12-18 23:39:39,251 | INFO     | preparing for final server update for job 6933834520 in state='finished'
[2025-12-19 00:40:14] 2025-12-18 23:39:39,252 | INFO     | this job has now completed (state=finished)
[2025-12-19 00:40:14] 2025-12-18 23:39:39,252 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-19 00:40:14] 2025-12-18 23:39:39,252 | INFO     | log transfer has been attempted: DONE
[2025-12-19 00:40:14] 2025-12-18 23:39:39,252 | INFO     | job 6933834520 has finished - writing final server update
[2025-12-19 00:40:14] 2025-12-18 23:39:39,253 | INFO     | total number of processed events: 400 (read)
[2025-12-19 00:40:14] 2025-12-18 23:39:39,254 | INFO     | executing command: lscpu
[2025-12-19 00:40:14] 2025-12-18 23:39:39,269 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-19 00:40:14] 2025-12-18 23:39:41,100 | INFO     | time since job start (5748s) is within the limit (174528.0s)
[2025-12-19 00:40:14] 2025-12-18 23:39:41,237 | INFO     | monitor loop #440: job 0:6933834520 is in state 'finished'
[2025-12-19 00:40:14] 2025-12-18 23:39:41,237 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 00:40:14] 2025-12-18 23:39:43,004 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-19 00:40:14] 2025-12-18 23:39:43,005 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2025-12-19 00:40:14] 2025-12-18 23:39:43,006 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933834520/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 00:40:14] 2025-12-18 23:39:43,007 | INFO     | extracted standard info from prmon json
[2025-12-19 00:40:14] 2025-12-18 23:39:43,007 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 00:40:14] 2025-12-18 23:39:43,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 00:40:14] 2025-12-18 23:39:43,007 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 00:40:14] 2025-12-18 23:39:43,007 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 00:40:14] 2025-12-18 23:39:43,008 | INFO     | fitting pss+swap vs Time
[2025-12-19 00:40:14] 2025-12-18 23:39:43,008 | INFO     | sum of square deviations: 204163828.0
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | sum of deviations: -3739919272.0
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | mean x: 1766098382.0
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | mean y: 2344171.574712644
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | intersect: 32354134592.989704
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | chi2: 0.03718993509690034
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | current memory leak: -18.32 B/s (using 87 data points, chi2=0.04)
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | could have reported an average CPU frequency of 2400 MHz (7 samples)
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | ..............................
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | . Timing measurements:
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | . get job = 0 s
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | . initial setup = 1 s
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | . payload setup = 3 s
[2025-12-19 00:40:14] 2025-12-18 23:39:43,009 | INFO     | . stage-in = 0 s
[2025-12-19 00:40:14] 2025-12-18 23:39:43,010 | INFO     | . payload execution = 5720 s
[2025-12-19 00:40:14] 2025-12-18 23:39:43,010 | INFO     | . stage-out = 0 s
[2025-12-19 00:40:14] 2025-12-18 23:39:43,010 | INFO     | . log creation = 0 s
[2025-12-19 00:40:14] 2025-12-18 23:39:43,010 | INFO     | ..............................
[2025-12-19 00:40:14] 2025-12-18 23:39:43,057 | INFO     | 
[2025-12-19 00:40:14] 2025-12-18 23:39:43,057 | INFO     | job summary report
[2025-12-19 00:40:14] 2025-12-18 23:39:43,057 | INFO     | --------------------------------------------------
[2025-12-19 00:40:14] 2025-12-18 23:39:43,057 | INFO     | PanDA job id: 6933834520
[2025-12-19 00:40:14] 2025-12-18 23:39:43,057 | INFO     | task id: 47886831
[2025-12-19 00:40:14] 2025-12-18 23:39:43,057 | INFO     | errors: (none)
[2025-12-19 00:40:14] 2025-12-18 23:39:43,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 00:40:14] 2025-12-18 23:39:43,057 | INFO     | pilot state: finished 
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | transexitcode: 0
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | exeerrorcode: 0
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | exeerrordiag: 
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | exitcode: 0
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | exitmsg: OK
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | cpuconsumptiontime: 21689 s
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | nevents: 400
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | neventsw: 0
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | pid: 4120603
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | pgrp: 4120603
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | corecount: 4
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | event service: False
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | sizes: {0: 2284007, 2: 2284269, 10: 2284297, 5727: 2311064, 5729: 2320146, 5735: 2320284}
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | --------------------------------------------------
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | 
[2025-12-19 00:40:14] 2025-12-18 23:39:43,058 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2025-12-19 00:40:14] 2025-12-18 23:39:43,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,070 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,070 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,070 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,070 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | job 6933834520 has completed (purged errors)
[2025-12-19 00:40:14] 2025-12-18 23:39:43,071 | INFO     | overall cleanup function is called
[2025-12-19 00:40:14] 2025-12-18 23:39:44,078 | INFO     | --- collectZombieJob: --- 10, [4120603]
[2025-12-19 00:40:14] 2025-12-18 23:39:44,078 | INFO     | zombie collector waiting for pid 4120603
[2025-12-19 00:40:14] 2025-12-18 23:39:44,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 00:40:14] 2025-12-18 23:39:44,078 | INFO     | collected zombie processes
[2025-12-19 00:40:14] 2025-12-18 23:39:44,079 | INFO     | will attempt to kill all subprocesses of pid=4120603
[2025-12-19 00:40:14] 2025-12-18 23:39:44,165 | INFO     | process IDs to be killed: [4120603] (in reverse order)
[2025-12-19 00:40:14] 2025-12-18 23:39:44,195 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 00:40:14] 2025-12-18 23:39:44,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 00:40:14] 2025-12-18 23:39:44,202 | INFO     | did not find any defunct processes belonging to 4120603
[2025-12-19 00:40:14] 2025-12-18 23:39:44,206 | INFO     | did not find any defunct processes belonging to 4120603
[2025-12-19 00:40:14] 2025-12-18 23:39:44,206 | INFO     | ready for new job
[2025-12-19 00:40:14] 2025-12-18 23:39:44,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 00:40:14] 2025-12-18 23:39:44,207 | INFO     | ***************************************
[2025-12-19 00:40:14] 2025-12-18 23:39:44,207 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 00:40:14] 2025-12-18 23:39:44,207 | INFO     | ***************************************
[2025-12-19 00:40:14] 2025-12-18 23:39:44,207 | INFO     | 
[2025-12-19 00:40:14] 2025-12-18 23:39:44,208 | INFO     | pilot is running in a VM
[2025-12-19 00:40:14] 2025-12-18 23:39:44,208 | INFO     | architecture information:
[2025-12-19 00:40:14] 2025-12-18 23:39:44,208 | INFO     | executing command: cat /etc/os-release
[2025-12-19 00:40:14] 2025-12-18 23:39:44,216 | INFO     | cat /etc/os-release:
[2025-12-19 00:40:14] NAME="CentOS Linux"
[2025-12-19 00:40:14] VERSION="7 (Core)"
[2025-12-19 00:40:14] ID="centos"
[2025-12-19 00:40:14] ID_LIKE="rhel fedora"
[2025-12-19 00:40:14] VERSION_ID="7"
[2025-12-19 00:40:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 00:40:14] ANSI_COLOR="0;31"
[2025-12-19 00:40:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 00:40:14] HOME_URL="https://www.centos.org/"
[2025-12-19 00:40:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 00:40:14] 
[2025-12-19 00:40:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 00:40:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 00:40:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 00:40:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 00:40:14] 
[2025-12-19 00:40:14] 2025-12-18 23:39:44,216 | INFO     | ***************************************
[2025-12-19 00:40:14] 2025-12-18 23:39:44,720 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-12-19 00:40:14] 2025-12-18 23:39:44,732 | INFO     | sufficient remaining disk space (150731751424 B)
[2025-12-19 00:40:14] 2025-12-18 23:39:44,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 00:40:14] 2025-12-18 23:39:44,732 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 00:40:14] 2025-12-18 23:39:44,732 | INFO     | update_server=False
[2025-12-19 00:40:14] 2025-12-18 23:39:44,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 00:40:14] 2025-12-18 23:39:44,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 00:40:14] 2025-12-18 23:39:44,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 00:40:14] 2025-12-18 23:39:44,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 00:40:14] 2025-12-18 23:39:44,745 | INFO     | aborting loop
[2025-12-19 00:40:14] 2025-12-18 23:39:45,322 | INFO     | all data control threads have been joined
[2025-12-19 00:40:14] 2025-12-18 23:39:45,486 | INFO     | all payload control threads have been joined
[2025-12-19 00:40:14] 2025-12-18 23:39:45,733 | INFO     | [job] retrieve thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:45,737 | INFO     | [job] queue monitor thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:45,751 | INFO     | [job] job monitor thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,106 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,204 | INFO     | [payload] failed_post thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,239 | INFO     | [data] copytool_in thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,239 | INFO     | all job control threads have been joined
[2025-12-19 00:40:14] 2025-12-18 23:39:46,278 | INFO     | [job] validate thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,278 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,327 | INFO     | [data] control thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,493 | INFO     | [payload] control thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,594 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,738 | INFO     | [data] copytool_out thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:46,869 | INFO     | [payload] validate_post thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:47,244 | INFO     | [job] control thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:47,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 00:40:14] 2025-12-18 23:39:51,608 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 00:40:14] 2025-12-18 23:39:59,827 | INFO     | [monitor] cgroup control has ended
[2025-12-19 00:40:14] 2025-12-18 23:40:00,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123918573233984)>', '<ExcThread(monitor, started 123917817587456)>']
[2025-12-19 00:40:14] 2025-12-18 23:40:05,889 | INFO     | all workflow threads have been joined
[2025-12-19 00:40:14] 2025-12-18 23:40:05,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 00:40:14] 2025-12-18 23:40:05,890 | INFO     | traces error code: 0
[2025-12-19 00:40:14] 2025-12-18 23:40:05,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 00:40:14] 2025-12-18 23:40:14,298 | INFO     | PID=4114053 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-19 00:40:14] 2025-12-18 23:40:14,298 | INFO     | .. there are 2 such processes running
[2025-12-19 00:40:14] 2025-12-18 23:40:14,299 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 00:40:14] 2025-12-18 23:40:14,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 00:40:14] 2025-12-18 23:40:14,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 00:40:14] 2025-12-18 23:40:14,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 00:40:14] 2025-12-18 23:40:14,299 | INFO     | [monitor] control thread has ended
[2025-12-19 00:40:14] 2025-12-18 23:40:14,365 [wrapper] ==== pilot stdout END ====
[2025-12-19 00:40:14] 2025-12-18 23:40:14,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 00:40:14] 2025-12-18 23:40:14,372 [wrapper] pilotpid: 4114053
[2025-12-19 00:40:14] 2025-12-18 23:40:14,374 [wrapper] Pilot exit status: 0
[2025-12-19 00:40:14] 2025-12-18 23:40:14,384 [wrapper] pandaids: 6933834520
[2025-12-19 00:40:14] 2025-12-18 23:40:14,407 [wrapper] cleanup supervisor_pilot 4161248 4114054
[2025-12-19 00:40:14] 2025-12-18 23:40:14,411 [wrapper] Test setup, not cleaning
[2025-12-19 00:40:14] 2025-12-18 23:40:14,414 [wrapper] apfmon messages muted
[2025-12-19 00:40:14] 2025-12-18 23:40:14,418 [wrapper] ==== wrapper stdout END ====
[2025-12-19 00:40:14] 2025-12-18 23:40:14,421 [wrapper] ==== wrapper stderr END ====
[2025-12-19 00:40:14]  *** Error codes and diagnostics ***
[2025-12-19 00:40:14]     "exeErrorCode": 0,
[2025-12-19 00:40:14]     "exeErrorDiag": "",
[2025-12-19 00:40:14]     "pilotErrorCode": 0,
[2025-12-19 00:40:14]     "pilotErrorDiag": "",
[2025-12-19 00:40:14]  *** Listing of results directory ***
[2025-12-19 00:40:14] insgesamt 338080
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc    579449 Dez 18 11:44 pilot3.tar.gz
[2025-12-19 00:40:14] -rwx------ 1 yeti boinc     36322 Dez 18 11:47 runpilot2-wrapper.sh
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc      5112 Dez 18 11:50 queuedata.json
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc       100 Dez 18 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 00:40:14] -rwxr-xr-x 1 yeti boinc      7986 Dez 18 23:03 run_atlas
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc       105 Dez 18 23:03 job.xml
[2025-12-19 00:40:14] -rw-r--r-- 2 yeti boinc     15847 Dez 18 23:03 start_atlas.sh
[2025-12-19 00:40:14] drwxrwx--x 2 yeti boinc      4096 Dez 18 23:03 shared
[2025-12-19 00:40:14] -rw-r--r-- 2 yeti boinc    592416 Dez 18 23:03 input.tar.gz
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc      6616 Dez 18 23:03 init_data.xml
[2025-12-19 00:40:14] -rw-r--r-- 2 yeti boinc 191490468 Dez 18 23:03 EVNT.47886829._000697.pool.root.1
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc         0 Dez 18 23:03 boinc_setup_complete
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc         0 Dez 18 23:03 boinc_lockfile
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc      2539 Dez 18 23:03 pandaJob.out
[2025-12-19 00:40:14] -rw------- 1 yeti boinc        52 Dez 18 23:03 setup.sh.local
[2025-12-19 00:40:14] -rw------- 1 yeti boinc    988848 Dez 18 23:03 agis_schedconf.cvmfs.json
[2025-12-19 00:40:14] -rw------- 1 yeti boinc   1516240 Dez 18 23:03 agis_ddmendpoints.agis.ALL.json
[2025-12-19 00:40:14] drwx------ 5 yeti boinc      4096 Dez 18 23:03 pilot3
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc       529 Dez 19 00:39 boinc_task_state.xml
[2025-12-19 00:40:14] -rw------- 1 yeti boinc 148514503 Dez 19 00:39 HITS.47886831._018083.pool.root.1
[2025-12-19 00:40:14] -rw------- 1 yeti boinc      1025 Dez 19 00:39 memory_monitor_summary.json
[2025-12-19 00:40:14] -rw------- 1 yeti boinc        95 Dez 19 00:39 pilot_heartbeat.json
[2025-12-19 00:40:14] -rw------- 1 yeti boinc    273974 Dez 19 00:39 log.47886831._018083.job.log.tgz.1
[2025-12-19 00:40:14] -rw------- 1 yeti boinc      7768 Dez 19 00:39 heartbeat.json
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc        27 Dez 19 00:40 wrapper_checkpoint.txt
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc      8192 Dez 19 00:40 boinc_mmap_file
[2025-12-19 00:40:14] -rw------- 1 yeti boinc       822 Dez 19 00:40 pilotlog.txt
[2025-12-19 00:40:14] -rw------- 1 yeti boinc    861462 Dez 19 00:40 log.47886831._018083.job.log.1
[2025-12-19 00:40:14] -rw------- 1 yeti boinc       357 Dez 19 00:40 output.list
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc       620 Dez 19 00:40 runtime_log
[2025-12-19 00:40:14] -rw------- 1 yeti boinc   1157120 Dez 19 00:40 result.tar.gz
[2025-12-19 00:40:14] -rw------- 1 yeti boinc       638 Dez 19 00:40 ygRMDmviQq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKxdKDmoERovn.diag
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc      9545 Dez 19 00:40 runtime_log.err
[2025-12-19 00:40:14] -rw-r--r-- 1 yeti boinc     21370 Dez 19 00:40 stderr.txt
[2025-12-19 00:40:14] HITS file was successfully produced:
[2025-12-19 00:40:14] -rw------- 1 yeti boinc 148514503 Dez 19 00:39 shared/HITS.pool.root.1
[2025-12-19 00:40:14]  *** Contents of shared directory: ***
[2025-12-19 00:40:14] insgesamt 333776
[2025-12-19 00:40:14] -rw-r--r-- 2 yeti boinc     15847 Dez 18 23:03 start_atlas.sh
[2025-12-19 00:40:14] -rw-r--r-- 2 yeti boinc    592416 Dez 18 23:03 input.tar.gz
[2025-12-19 00:40:14] -rw-r--r-- 2 yeti boinc 191490468 Dez 18 23:03 ATLAS.root_0
[2025-12-19 00:40:14] -rw------- 1 yeti boinc 148514503 Dez 19 00:39 HITS.pool.root.1
[2025-12-19 00:40:14] -rw------- 1 yeti boinc   1157120 Dez 19 00:40 result.tar.gz
00:40:15 (4110251): run_atlas exited; CPU time 21760.399246
00:40:15 (4110251): called boinc_finish(0)

</stderr_txt>
]]>

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