Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:54:43 (2208): wrapper (7.7.26015): starting
10:54:43 (2208): wrapper: running run_atlas (--nthreads 8)
[2025-12-18 10:54:43] Arguments: --nthreads 8
[2025-12-18 10:54:43] Threads: 8
[2025-12-18 10:54:43] Checking for CVMFS
[2025-12-18 10:54:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 10:54:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 10:54:43] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 10:54:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 10:54:43] 2.11.2.0 18601 133752 141344 154155 1 59 10577492 18432000 1833 130560 0 95201411 99.985 4976810 31746 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-18 10:54:43] CVMFS is ok
[2025-12-18 10:54:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 10:54:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 10:54:43] Further information can be found at the LHC@home message board.
[2025-12-18 10:54:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 10:54:43] Checking for apptainer binary...
[2025-12-18 10:54:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 10:54:43] Running /usr/bin/apptainer --version
[2025-12-18 10:54:43] apptainer version 1.3.2-1.el7
[2025-12-18 10:54:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 10:54:44] c-206-13.aglt2.org
[2025-12-18 10:54:44] apptainer works
[2025-12-18 10:54:44] Set ATHENA_PROC_NUMBER=8
[2025-12-18 10:54:44] Set ATHENA_CORE_NUMBER=8
[2025-12-18 10:54:44] Starting ATLAS job with PandaID=6933466420
[2025-12-18 10:54:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 15:16:25]  *** The last 200 lines of the pilot log: ***
[2025-12-18 15:16:25] 2025-12-18 20:15:36,137 | INFO     | executing command: lscpu
[2025-12-18 15:16:25] 2025-12-18 20:15:36,164 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 15:16:25] 2025-12-18 20:15:36,533 | INFO     | monitor loop #1130: job 0:6933466420 is in state 'finished'
[2025-12-18 15:16:25] 2025-12-18 20:15:36,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 15:16:25] 2025-12-18 20:15:36,734 | INFO     | time since job start (15641s) is within the limit (174528.0s)
[2025-12-18 15:16:25] 2025-12-18 20:15:38,740 | INFO     | time since job start (15643s) is within the limit (174528.0s)
[2025-12-18 15:16:25] 2025-12-18 20:15:39,036 | INFO     | monitor loop #1131: job 0:6933466420 is in state 'finished'
[2025-12-18 15:16:25] 2025-12-18 20:15:39,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 15:16:25] 2025-12-18 20:15:40,159 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-18 15:16:25] 2025-12-18 20:15:40,163 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2367.0
[2025-12-18 15:16:25] 2025-12-18 20:15:40,165 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6933466420/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 15:16:25] 2025-12-18 20:15:40,166 | INFO     | extracted standard info from prmon json
[2025-12-18 15:16:25] 2025-12-18 20:15:40,166 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 15:16:25] 2025-12-18 20:15:40,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 15:16:25] 2025-12-18 20:15:40,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 15:16:25] 2025-12-18 20:15:40,167 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 15:16:25] 2025-12-18 20:15:40,170 | INFO     | fitting pss+swap vs Time
[2025-12-18 15:16:25] 2025-12-18 20:15:40,171 | INFO     | sum of square deviations: 5202255680.0
[2025-12-18 15:16:25] 2025-12-18 20:15:40,172 | INFO     | sum of deviations: 32152366261.5
[2025-12-18 15:16:25] 2025-12-18 20:15:40,172 | INFO     | mean x: 1766081097.5
[2025-12-18 15:16:25] 2025-12-18 20:15:40,172 | INFO     | mean y: 2480852.08203125
[2025-12-18 15:16:25] 2025-12-18 20:15:40,173 | INFO     | intersect: -10912723971.978422
[2025-12-18 15:16:25] 2025-12-18 20:15:40,173 | INFO     | chi2: 1.3755540045511208
[2025-12-18 15:16:25] 2025-12-18 20:15:40,173 | INFO     | sum of square deviations: 4903347750.0
[2025-12-18 15:16:25] 2025-12-18 20:15:40,175 | INFO     | sum of deviations: 31400337490.999985
[2025-12-18 15:16:25] 2025-12-18 20:15:40,175 | INFO     | mean x: 1766080945.0
[2025-12-18 15:16:25] 2025-12-18 20:15:40,175 | INFO     | mean y: 2480468.354581673
[2025-12-18 15:16:25] 2025-12-18 20:15:40,175 | INFO     | intersect: -11307249238.135069
[2025-12-18 15:16:25] 2025-12-18 20:15:40,175 | INFO     | chi2: 1.376083757431619
[2025-12-18 15:16:25] 2025-12-18 20:15:40,175 | INFO     | current chi2=1.376083757431619 (change=-0.03851196526966173 %)
[2025-12-18 15:16:25] 2025-12-18 20:15:40,176 | INFO     | right removable region: 250
[2025-12-18 15:16:25] 2025-12-18 20:15:40,176 | INFO     | sum of square deviations: 4903347750.0
[2025-12-18 15:16:25] 2025-12-18 20:15:40,177 | INFO     | sum of deviations: -2986591049.0000014
[2025-12-18 15:16:25] 2025-12-18 20:15:40,177 | INFO     | mean x: 1766081250.0
[2025-12-18 15:16:25] 2025-12-18 20:15:40,177 | INFO     | mean y: 2498605.964143426
[2025-12-18 15:16:25] 2025-12-18 20:15:40,178 | INFO     | intersect: 1078204984.9491408
[2025-12-18 15:16:25] 2025-12-18 20:15:40,178 | INFO     | chi2: 0.08444023937598077
[2025-12-18 15:16:25] 2025-12-18 20:15:40,178 | INFO     | current chi2=0.08444023937598077 (change=93.86136501390682 %)
[2025-12-18 15:16:25] 2025-12-18 20:15:40,178 | INFO     | sum of square deviations: 4616114457.5
[2025-12-18 15:16:25] 2025-12-18 20:15:40,180 | INFO     | sum of deviations: -6514989862.499999
[2025-12-18 15:16:25] 2025-12-18 20:15:40,180 | INFO     | mean x: 1766081402.5
[2025-12-18 15:16:25] 2025-12-18 20:15:40,180 | INFO     | mean y: 2500479.1666666665
[2025-12-18 15:16:25] 2025-12-18 20:15:40,180 | INFO     | intersect: 2495073516.419454
[2025-12-18 15:16:25] 2025-12-18 20:15:40,180 | INFO     | chi2: 0.07589918196305336
[2025-12-18 15:16:25] 2025-12-18 20:15:40,181 | INFO     | current chi2=0.07589918196305336 (change=10.114913785236073 %)
[2025-12-18 15:16:25] 2025-12-18 20:15:40,181 | INFO     | left removable region: 20
[2025-12-18 15:16:25] 2025-12-18 20:15:40,181 | INFO     | sum of square deviations: 3772712597.5
[2025-12-18 15:16:25] 2025-12-18 20:15:40,182 | INFO     | sum of deviations: 4671631289.499999
[2025-12-18 15:16:25] 2025-12-18 20:15:40,182 | INFO     | mean x: 1766081524.5
[2025-12-18 15:16:25] 2025-12-18 20:15:40,182 | INFO     | mean y: 2493754.5086956522
[2025-12-18 15:16:25] 2025-12-18 20:15:40,183 | INFO     | intersect: -2184389422.1025486
[2025-12-18 15:16:25] 2025-12-18 20:15:40,183 | INFO     | chi2: 0.012896724182968507
[2025-12-18 15:16:25] 2025-12-18 20:15:40,183 | INFO     | current memory leak: 1.24 B/s (using 230 data points, chi2=0.01)
[2025-12-18 15:16:25] 2025-12-18 20:15:40,183 | INFO     | could have reported an average CPU frequency of 2544 MHz (12 samples)
[2025-12-18 15:16:25] 2025-12-18 20:15:40,184 | INFO     | ..............................
[2025-12-18 15:16:25] 2025-12-18 20:15:40,184 | INFO     | . Timing measurements:
[2025-12-18 15:16:25] 2025-12-18 20:15:40,184 | INFO     | . get job = 0 s
[2025-12-18 15:16:25] 2025-12-18 20:15:40,184 | INFO     | . initial setup = 2 s
[2025-12-18 15:16:25] 2025-12-18 20:15:40,184 | INFO     | . payload setup = 4 s
[2025-12-18 15:16:25] 2025-12-18 20:15:40,184 | INFO     | . stage-in = 0 s
[2025-12-18 15:16:25] 2025-12-18 20:15:40,184 | INFO     | . payload execution = 15609 s
[2025-12-18 15:16:25] 2025-12-18 20:15:40,184 | INFO     | . stage-out = 2 s
[2025-12-18 15:16:25] 2025-12-18 20:15:40,184 | INFO     | . log creation = 0 s
[2025-12-18 15:16:25] 2025-12-18 20:15:40,184 | INFO     | ..............................
[2025-12-18 15:16:25] 2025-12-18 20:15:40,314 | INFO     | 
[2025-12-18 15:16:25] 2025-12-18 20:15:40,314 | INFO     | job summary report
[2025-12-18 15:16:25] 2025-12-18 20:15:40,314 | INFO     | --------------------------------------------------
[2025-12-18 15:16:25] 2025-12-18 20:15:40,314 | INFO     | PanDA job id: 6933466420
[2025-12-18 15:16:25] 2025-12-18 20:15:40,315 | INFO     | task id: 47898763
[2025-12-18 15:16:25] 2025-12-18 20:15:40,315 | INFO     | errors: (none)
[2025-12-18 15:16:25] 2025-12-18 20:15:40,315 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 15:16:25] 2025-12-18 20:15:40,315 | INFO     | pilot state: finished 
[2025-12-18 15:16:25] 2025-12-18 20:15:40,315 | INFO     | transexitcode: 0
[2025-12-18 15:16:25] 2025-12-18 20:15:40,315 | INFO     | exeerrorcode: 0
[2025-12-18 15:16:25] 2025-12-18 20:15:40,316 | INFO     | exeerrordiag: 
[2025-12-18 15:16:25] 2025-12-18 20:15:40,316 | INFO     | exitcode: 0
[2025-12-18 15:16:25] 2025-12-18 20:15:40,316 | INFO     | exitmsg: OK
[2025-12-18 15:16:25] 2025-12-18 20:15:40,316 | INFO     | cpuconsumptiontime: 117415 s
[2025-12-18 15:16:25] 2025-12-18 20:15:40,316 | INFO     | nevents: 400
[2025-12-18 15:16:25] 2025-12-18 20:15:40,316 | INFO     | neventsw: 0
[2025-12-18 15:16:25] 2025-12-18 20:15:40,317 | INFO     | pid: 12489
[2025-12-18 15:16:25] 2025-12-18 20:15:40,317 | INFO     | pgrp: 12489
[2025-12-18 15:16:25] 2025-12-18 20:15:40,317 | INFO     | corecount: 8
[2025-12-18 15:16:25] 2025-12-18 20:15:40,317 | INFO     | event service: False
[2025-12-18 15:16:25] 2025-12-18 20:15:40,317 | INFO     | sizes: {0: 2283128, 1: 2283984, 2: 2283984, 4: 2284274, 12: 2284302, 15617: 2315697, 15619: 2324695, 15622: 2324751, 15629: 2324945}
[2025-12-18 15:16:25] 2025-12-18 20:15:40,317 | INFO     | --------------------------------------------------
[2025-12-18 15:16:25] 2025-12-18 20:15:40,318 | INFO     | 
[2025-12-18 15:16:25] 2025-12-18 20:15:40,318 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-18 15:16:25] 2025-12-18 20:15:40,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,336 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 15:16:25] 2025-12-18 20:15:40,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,339 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 15:16:25] 2025-12-18 20:15:40,339 | INFO     | job 6933466420 has completed (purged errors)
[2025-12-18 15:16:25] 2025-12-18 20:15:40,339 | INFO     | overall cleanup function is called
[2025-12-18 15:16:25] 2025-12-18 20:15:41,347 | INFO     | --- collectZombieJob: --- 10, [12489]
[2025-12-18 15:16:25] 2025-12-18 20:15:41,348 | INFO     | zombie collector waiting for pid 12489
[2025-12-18 15:16:25] 2025-12-18 20:15:41,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 15:16:25] 2025-12-18 20:15:41,348 | INFO     | collected zombie processes
[2025-12-18 15:16:25] 2025-12-18 20:15:41,348 | INFO     | will attempt to kill all subprocesses of pid=12489
[2025-12-18 15:16:25] 2025-12-18 20:15:41,502 | INFO     | process IDs to be killed: [12489] (in reverse order)
[2025-12-18 15:16:25] 2025-12-18 20:15:41,559 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 15:16:25] 2025-12-18 20:15:41,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 15:16:25] 2025-12-18 20:15:41,565 | INFO     | did not find any defunct processes belonging to 12489
[2025-12-18 15:16:25] 2025-12-18 20:15:41,570 | INFO     | did not find any defunct processes belonging to 12489
[2025-12-18 15:16:25] 2025-12-18 20:15:41,570 | INFO     | ready for new job
[2025-12-18 15:16:25] 2025-12-18 20:15:41,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 15:16:25] 2025-12-18 20:15:41,572 | INFO     | ***************************************
[2025-12-18 15:16:25] 2025-12-18 20:15:41,573 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 15:16:25] 2025-12-18 20:15:41,573 | INFO     | ***************************************
[2025-12-18 15:16:25] 2025-12-18 20:15:41,573 | INFO     | 
[2025-12-18 15:16:25] 2025-12-18 20:15:41,574 | INFO     | architecture information:
[2025-12-18 15:16:25] 2025-12-18 20:15:41,575 | INFO     | executing command: cat /etc/os-release
[2025-12-18 15:16:25] 2025-12-18 20:15:41,589 | INFO     | cat /etc/os-release:
[2025-12-18 15:16:25] NAME="CentOS Linux"
[2025-12-18 15:16:25] VERSION="7 (Core)"
[2025-12-18 15:16:25] ID="centos"
[2025-12-18 15:16:25] ID_LIKE="rhel fedora"
[2025-12-18 15:16:25] VERSION_ID="7"
[2025-12-18 15:16:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 15:16:25] ANSI_COLOR="0;31"
[2025-12-18 15:16:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 15:16:25] HOME_URL="https://www.centos.org/"
[2025-12-18 15:16:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 15:16:25] 
[2025-12-18 15:16:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 15:16:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 15:16:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 15:16:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 15:16:25] 
[2025-12-18 15:16:25] 2025-12-18 20:15:41,590 | INFO     | ***************************************
[2025-12-18 15:16:25] 2025-12-18 20:15:42,093 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-18 15:16:25] 2025-12-18 20:15:42,111 | INFO     | sufficient remaining disk space (28288483328 B)
[2025-12-18 15:16:25] 2025-12-18 20:15:42,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 15:16:25] 2025-12-18 20:15:42,112 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 15:16:25] 2025-12-18 20:15:42,112 | INFO     | update_server=False
[2025-12-18 15:16:25] 2025-12-18 20:15:42,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 15:16:25] 2025-12-18 20:15:42,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 15:16:25] 2025-12-18 20:15:42,132 | INFO     | all payload control threads have been joined
[2025-12-18 15:16:25] 2025-12-18 20:15:42,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 15:16:25] 2025-12-18 20:15:42,539 | INFO     | aborting loop
[2025-12-18 15:16:25] 2025-12-18 20:15:42,729 | INFO     | all data control threads have been joined
[2025-12-18 15:16:25] 2025-12-18 20:15:43,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 15:16:25] 2025-12-18 20:15:43,118 | INFO     | [job] retrieve thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:43,118 | INFO     | [job] queue monitor thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:43,138 | INFO     | [payload] control thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:43,396 | INFO     | [job] validate thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:43,503 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:43,545 | INFO     | [job] job monitor thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:43,735 | INFO     | [data] control thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:43,743 | INFO     | all job control threads have been joined
[2025-12-18 15:16:25] 2025-12-18 20:15:43,811 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:43,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 15:16:25] 2025-12-18 20:15:43,868 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:43,868 | INFO     | [data] copytool_in thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:44,653 | INFO     | [payload] validate_post thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:44,709 | INFO     | [payload] failed_post thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:44,750 | INFO     | [job] control thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:45,073 | INFO     | [data] copytool_out thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:47,878 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:15:53,143 | INFO     | job.realtimelogging is not enabled
[2025-12-18 15:16:25] 2025-12-18 20:15:54,166 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 15:16:25] 2025-12-18 20:16:11,974 | INFO     | PID=5956 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-18 15:16:25] 2025-12-18 20:16:11,974 | INFO     | .. there are 3 such processes running
[2025-12-18 15:16:25] 2025-12-18 20:16:11,974 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 15:16:25] 2025-12-18 20:16:11,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 15:16:25] 2025-12-18 20:16:11,974 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 15:16:25] 2025-12-18 20:16:20,125 | INFO     | [monitor] cgroup control has ended
[2025-12-18 15:16:25] 2025-12-18 20:16:20,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228814063424)>', '<ExcThread(monitor, started 140228366939904)>']
[2025-12-18 15:16:25] 2025-12-18 20:16:21,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 15:16:25] 2025-12-18 20:16:21,016 | INFO     | [monitor] control thread has ended
[2025-12-18 15:16:25] 2025-12-18 20:16:25,327 | INFO     | all workflow threads have been joined
[2025-12-18 15:16:25] 2025-12-18 20:16:25,340 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 15:16:25] 2025-12-18 20:16:25,341 | INFO     | traces error code: 0
[2025-12-18 15:16:25] 2025-12-18 20:16:25,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 15:16:25] 2025-12-18 20:16:25,454 [wrapper] ==== pilot stdout END ====
[2025-12-18 15:16:25] 2025-12-18 20:16:25,457 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 15:16:25] 2025-12-18 20:16:25,459 [wrapper] pilotpid: 5956
[2025-12-18 15:16:25] 2025-12-18 20:16:25,461 [wrapper] Pilot exit status: 0
[2025-12-18 15:16:25] 2025-12-18 20:16:25,470 [wrapper] pandaids: 6933466420
[2025-12-18 15:16:25] 2025-12-18 20:16:25,510 [wrapper] cleanup supervisor_pilot 12079 5957
[2025-12-18 15:16:25] 2025-12-18 20:16:25,512 [wrapper] Test setup, not cleaning
[2025-12-18 15:16:25] 2025-12-18 20:16:25,515 [wrapper] apfmon messages muted
[2025-12-18 15:16:25] 2025-12-18 20:16:25,517 [wrapper] ==== wrapper stdout END ====
[2025-12-18 15:16:25] 2025-12-18 20:16:25,520 [wrapper] ==== wrapper stderr END ====
[2025-12-18 15:16:25]  *** Error codes and diagnostics ***
[2025-12-18 15:16:25]     "exeErrorCode": 0,
[2025-12-18 15:16:25]     "exeErrorDiag": "",
[2025-12-18 15:16:25]     "pilotErrorCode": 0,
[2025-12-18 15:16:25]     "pilotErrorDiag": "",
[2025-12-18 15:16:25]  *** Listing of results directory ***
[2025-12-18 15:16:25] total 443336
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas    579449 Dec 18 05:44 pilot3.tar.gz
[2025-12-18 15:16:25] -rwx------ 1 boincer umatlas     36322 Dec 18 05:45 runpilot2-wrapper.sh
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas      5112 Dec 18 05:45 queuedata.json
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas       100 Dec 18 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 15:16:25] -rwxr-xr-x 1 boincer umatlas      7986 Dec 18 10:54 run_atlas
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas       105 Dec 18 10:54 job.xml
[2025-12-18 15:16:25] -rw-r--r-- 2 boincer umatlas 221982117 Dec 18 10:54 EVNT.47898761._000926.pool.root.1
[2025-12-18 15:16:25] -rw-r--r-- 2 boincer umatlas     15847 Dec 18 10:54 start_atlas.sh
[2025-12-18 15:16:25] drwxrwx--x 2 boincer umatlas      4096 Dec 18 10:54 shared
[2025-12-18 15:16:25] -rw-r--r-- 2 boincer umatlas    592396 Dec 18 10:54 input.tar.gz
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas         0 Dec 18 10:54 boinc_lockfile
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas      2507 Dec 18 10:54 pandaJob.out
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas        57 Dec 18 10:54 setup.sh.local
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas    988125 Dec 18 10:54 agis_schedconf.cvmfs.json
[2025-12-18 15:16:25] drwx------ 5 boincer umatlas      4096 Dec 18 10:54 pilot3
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas      5952 Dec 18 15:10 init_data.xml
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas 222785982 Dec 18 15:14 HITS.47898763._024080.pool.root.1
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas       531 Dec 18 15:15 boinc_task_state.xml
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas        95 Dec 18 15:15 pilot_heartbeat.json
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas      1054 Dec 18 15:15 memory_monitor_summary.json
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas   1516240 Dec 18 15:15 agis_ddmendpoints.agis.ALL.json
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas    468805 Dec 18 15:15 log.47898763._024080.job.log.tgz.1
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas      7857 Dec 18 15:15 heartbeat.json
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas      8192 Dec 18 15:16 boinc_mmap_file
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas        29 Dec 18 15:16 wrapper_checkpoint.txt
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas      4892 Dec 18 15:16 pilotlog.txt
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas   2177538 Dec 18 15:16 log.47898763._024080.job.log.1
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas       357 Dec 18 15:16 output.list
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas       620 Dec 18 15:16 runtime_log
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas   2662400 Dec 18 15:16 result.tar.gz
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas      9343 Dec 18 15:16 runtime_log.err
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas       663 Dec 18 15:16 HPJNDmUgQq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeDZKDmmGkMun.diag
[2025-12-18 15:16:25] -rw-r--r-- 1 boincer umatlas     21350 Dec 18 15:16 stderr.txt
[2025-12-18 15:16:25] HITS file was successfully produced:
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas 222785982 Dec 18 15:14 shared/HITS.pool.root.1
[2025-12-18 15:16:25]  *** Contents of shared directory: ***
[2025-12-18 15:16:25] total 437552
[2025-12-18 15:16:25] -rw-r--r-- 2 boincer umatlas 221982117 Dec 18 10:54 ATLAS.root_0
[2025-12-18 15:16:25] -rw-r--r-- 2 boincer umatlas     15847 Dec 18 10:54 start_atlas.sh
[2025-12-18 15:16:25] -rw-r--r-- 2 boincer umatlas    592396 Dec 18 10:54 input.tar.gz
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas 222785982 Dec 18 15:14 HITS.pool.root.1
[2025-12-18 15:16:25] -rw------- 1 boincer umatlas   2662400 Dec 18 15:16 result.tar.gz
15:16:27 (2208): run_atlas exited; CPU time 117639.348453
15:16:27 (2208): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN