Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:35:55 (1973778): wrapper (7.7.26015): starting
00:35:55 (1973778): wrapper: running run_atlas (--nthreads 2)
[2025-12-19 00:35:55] Arguments: --nthreads 2
[2025-12-19 00:35:55] Threads: 2
[2025-12-19 00:35:55] Checking for CVMFS
[2025-12-19 00:35:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 00:35:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 00:35:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 00:35:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 00:35:55] 2.9.2.0 357904 8304 64632 154169 0 57 28358751 36864001 0 130560 0 4256561 99.987 300801 15891 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-19 00:35:55] CVMFS is ok
[2025-12-19 00:35:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-19 00:35:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-19 00:35:55] Further information can be found at the LHC@home message board.
[2025-12-19 00:35:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 00:35:55] Checking for apptainer binary...
[2025-12-19 00:35:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 00:35:55] Running /usr/bin/apptainer --version
[2025-12-19 00:35:55] apptainer version 1.4.1-1.1
[2025-12-19 00:35:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 00:35:55] atlasA229
[2025-12-19 00:35:55] apptainer works
[2025-12-19 00:35:55] Set ATHENA_PROC_NUMBER=2
[2025-12-19 00:35:55] Set ATHENA_CORE_NUMBER=2
[2025-12-19 00:35:55] Starting ATLAS job with PandaID=6933834587
[2025-12-19 00:35:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 02:53:26]  *** The last 200 lines of the pilot log: ***
[2025-12-19 02:53:26] 2025-12-19 01:52:44,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 02:53:26] 2025-12-19 01:52:44,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 02:53:26] 2025-12-19 01:52:44,406 | INFO     | aborting loop
[2025-12-19 02:53:26] 2025-12-19 01:52:44,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 02:53:26] 2025-12-19 01:52:44,430 | INFO     | all job control threads have been joined
[2025-12-19 02:53:26] 2025-12-19 01:52:45,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 02:53:26] 2025-12-19 01:52:45,316 | INFO     | all data control threads have been joined
[2025-12-19 02:53:26] 2025-12-19 01:52:45,412 | INFO     | [job] queue monitor thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:45,413 | INFO     | [job] retrieve thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:45,413 | INFO     | [job] job monitor thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:45,436 | INFO     | [job] control thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:45,437 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:45,447 | INFO     | all payload control threads have been joined
[2025-12-19 02:53:26] 2025-12-19 01:52:45,576 | INFO     | [payload] validate_post thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:46,247 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:46,261 | INFO     | [data] copytool_in thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:46,322 | INFO     | [data] control thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:46,453 | INFO     | [payload] control thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:46,484 | INFO     | [payload] failed_post thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:46,803 | INFO     | [job] validate thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:46,852 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:47,059 | INFO     | [data] copytool_out thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:48,413 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:52:55,090 | INFO     | job.realtimelogging is not enabled
[2025-12-19 02:53:26] 2025-12-19 01:52:56,096 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 02:53:26] 2025-12-19 01:53:14,494 | INFO     | PID=1977487 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-19 02:53:26] 2025-12-19 01:53:14,494 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 02:53:26] 2025-12-19 01:53:14,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 02:53:26] 2025-12-19 01:53:14,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 02:53:26] 2025-12-19 01:53:19,793 | INFO     | [monitor] cgroup control has ended
[2025-12-19 02:53:26] 2025-12-19 01:53:21,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631256196928)>', '<ExcThread(monitor, started 140630734903040)>']
[2025-12-19 02:53:26] 2025-12-19 01:53:22,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 02:53:26] 2025-12-19 01:53:22,537 | INFO     | [monitor] control thread has ended
[2025-12-19 02:53:26] 2025-12-19 01:53:26,667 | INFO     | all workflow threads have been joined
[2025-12-19 02:53:26] 2025-12-19 01:53:26,668 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 02:53:26] 2025-12-19 01:53:26,668 | INFO     | traces error code: 0
[2025-12-19 02:53:26] 2025-12-19 01:53:26,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 02:53:26] 2025-12-19 01:53:26,712 [wrapper] ==== pilot stdout END ====
[2025-12-19 02:53:26] 2025-12-19 01:53:26,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 02:53:26] 2025-12-19 01:53:26,716 [wrapper] pilotpid: 1977487
[2025-12-19 02:53:26] 2025-12-19 01:53:26,719 [wrapper] Pilot exit status: 0
[2025-12-19 02:53:26] 2025-12-19 01:53:26,725 [wrapper] pandaids: 6933834587
[2025-12-19 02:53:26] 2025-12-19 01:53:26,739 [wrapper] cleanup supervisor_pilot 2000363 1977488
[2025-12-19 02:53:26] 2025-12-19 01:53:26,741 [wrapper] Test setup, not cleaning
[2025-12-19 02:53:26] 2025-12-19 01:53:26,743 [wrapper] apfmon messages muted
[2025-12-19 02:53:26] 2025-12-19 01:53:26,745 [wrapper] ==== wrapper stdout END ====
[2025-12-19 02:53:26] 2025-12-19 01:53:26,747 [wrapper] ==== wrapper stderr END ====
[2025-12-19 02:53:26]  *** Error codes and diagnostics ***
[2025-12-19 02:53:26]     "exeErrorCode": 0,
[2025-12-19 02:53:26]     "exeErrorDiag": "",
[2025-12-19 02:53:26]     "pilotErrorCode": 0,
[2025-12-19 02:53:26]     "pilotErrorDiag": "",
[2025-12-19 02:53:26]  *** Listing of results directory ***
[2025-12-19 02:53:26] total 344232
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc      5112 Dec 18 11:44 queuedata.json
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc    579449 Dec 18 11:44 pilot3.tar.gz
[2025-12-19 02:53:26] -rwx------ 1 boinc boinc     36322 Dec 18 11:44 runpilot2-wrapper.sh
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc       100 Dec 19 00:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 02:53:26] -rwxr-xr-x 1 boinc boinc      7986 Dec 19 00:35 run_atlas
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc       105 Dec 19 00:35 job.xml
[2025-12-19 02:53:26] -rw-r--r-- 2 boinc boinc 189829770 Dec 19 00:35 EVNT.47886829._000699.pool.root.1
[2025-12-19 02:53:26] -rw-r--r-- 2 boinc boinc    592412 Dec 19 00:35 input.tar.gz
[2025-12-19 02:53:26] -rw-r--r-- 2 boinc boinc     15847 Dec 19 00:35 start_atlas.sh
[2025-12-19 02:53:26] drwxrwx--x 2 boinc boinc      4096 Dec 19 00:35 shared
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc         0 Dec 19 00:35 boinc_setup_complete
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc      6207 Dec 19 00:35 init_data.xml
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc         0 Dec 19 00:35 boinc_lockfile
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc      2539 Dec 19 00:35 pandaJob.out
[2025-12-19 02:53:26] -rw------- 1 boinc boinc    988880 Dec 19 00:36 agis_schedconf.cvmfs.json
[2025-12-19 02:53:26] -rw------- 1 boinc boinc   1516240 Dec 19 00:36 agis_ddmendpoints.agis.ALL.json
[2025-12-19 02:53:26] drwx------ 5 boinc boinc      4096 Dec 19 00:36 pilot3
[2025-12-19 02:53:26] -rw------- 1 boinc boinc 155818769 Dec 19 02:52 HITS.47886831._018150.pool.root.1
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc       530 Dec 19 02:52 boinc_task_state.xml
[2025-12-19 02:53:26] -rw------- 1 boinc boinc      1013 Dec 19 02:52 memory_monitor_summary.json
[2025-12-19 02:53:26] -rw------- 1 boinc boinc    297490 Dec 19 02:52 log.47886831._018150.job.log.tgz.1
[2025-12-19 02:53:26] -rw------- 1 boinc boinc      7756 Dec 19 02:52 heartbeat.json
[2025-12-19 02:53:26] -rw------- 1 boinc boinc        95 Dec 19 02:53 pilot_heartbeat.json
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc      8192 Dec 19 02:53 boinc_mmap_file
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc        27 Dec 19 02:53 wrapper_checkpoint.txt
[2025-12-19 02:53:26] -rw------- 1 boinc boinc      4824 Dec 19 02:53 pilotlog.txt
[2025-12-19 02:53:26] -rw------- 1 boinc boinc   1174848 Dec 19 02:53 log.47886831._018150.job.log.1
[2025-12-19 02:53:26] -rw------- 1 boinc boinc       357 Dec 19 02:53 output.list
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc       620 Dec 19 02:53 runtime_log
[2025-12-19 02:53:26] -rw------- 1 boinc boinc   1495040 Dec 19 02:53 result.tar.gz
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc      8912 Dec 19 02:53 runtime_log.err
[2025-12-19 02:53:26] -rw------- 1 boinc boinc       662 Dec 19 02:53 5t4NDm7fQq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcqdKDmOjqYen.diag
[2025-12-19 02:53:26] -rw-r--r-- 1 boinc boinc      7292 Dec 19 02:53 stderr.txt
[2025-12-19 02:53:26] HITS file was successfully produced:
[2025-12-19 02:53:26] -rw------- 1 boinc boinc 155818769 Dec 19 02:52 shared/HITS.pool.root.1
[2025-12-19 02:53:26]  *** Contents of shared directory: ***
[2025-12-19 02:53:26] total 339616
[2025-12-19 02:53:26] -rw-r--r-- 2 boinc boinc 189829770 Dec 19 00:35 ATLAS.root_0
[2025-12-19 02:53:26] -rw-r--r-- 2 boinc boinc    592412 Dec 19 00:35 input.tar.gz
[2025-12-19 02:53:26] -rw-r--r-- 2 boinc boinc     15847 Dec 19 00:35 start_atlas.sh
[2025-12-19 02:53:26] -rw------- 1 boinc boinc 155818769 Dec 19 02:52 HITS.pool.root.1
[2025-12-19 02:53:26] -rw------- 1 boinc boinc   1495040 Dec 19 02:53 result.tar.gz
02:53:48 (1973778): run_atlas exited; CPU time 15996.597799
02:53:48 (1973778): called boinc_finish(0)

</stderr_txt>
]]>

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