Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
22:43:47 (4155697): wrapper (7.7.26015): starting
22:43:47 (4155697): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 22:43:47] Arguments: --nthreads 4
[2025-12-18 22:43:47] Threads: 4
[2025-12-18 22:43:47] Checking for CVMFS
[2025-12-18 22:43:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 22:43:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 22:43:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 22:43:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 22:43:48] 2.13.1.0 189701 7089 101460 154165 1 187 7977762 10240001 1779 130560 0 20457192 99.997 262092 245 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-18 22:43:48] CVMFS is ok
[2025-12-18 22:43:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 22:43:48] Checking for apptainer binary...
[2025-12-18 22:43:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 22:43:48] Running /usr/bin/apptainer --version
[2025-12-18 22:43:48] apptainer version 1.4.2
[2025-12-18 22:43:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 22:43:48] julianvlneu
[2025-12-18 22:43:48] apptainer works
[2025-12-18 22:43:48] Set ATHENA_PROC_NUMBER=4
[2025-12-18 22:43:48] Set ATHENA_CORE_NUMBER=4
[2025-12-18 22:43:48] Starting ATLAS job with PandaID=6933048868
[2025-12-18 22:43:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 23:36:30]  *** The last 200 lines of the pilot log: ***
[2025-12-18 23:36:30]  protocol_id=None
[2025-12-18 23:36:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-18 23:36:30]  replicas=None
[2025-12-18 23:36:30]  scope=mc23_13p6TeV
[2025-12-18 23:36:30]  status=None
[2025-12-18 23:36:30]  status_code=0
[2025-12-18 23:36:30]  storage_token=
[2025-12-18 23:36:30]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6933048868/log.47929408._000095.job.log.tgz.1
[2025-12-18 23:36:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/7b/log.47929408._000095.job.log.tgz.1
[2025-12-18 23:36:30]  workdir=None
[2025-12-18 23:36:30] ]
[2025-12-18 23:36:30] 2025-12-18 22:35:52,372 | INFO     | transferring file log.47929408._000095.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6933048868/log.47929408._000095.job.log.tgz.1 to /var/li
[2025-12-18 23:36:30] 2025-12-18 22:35:52,373 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6933048868/log.47929408._000095.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-18 23:36:30] 2025-12-18 22:35:52,393 | INFO     | adding to output.list: log.47929408._000095.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/7b/log.47929408._000095.job.log.tg
[2025-12-18 23:36:30] 2025-12-18 22:35:52,394 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-18 23:36:30] 2025-12-18 22:35:52,394 | INFO     | summary of transferred files:
[2025-12-18 23:36:30] 2025-12-18 22:35:52,394 | INFO     |  -- lfn=log.47929408._000095.job.log.tgz.1, status_code=0, status=transferred
[2025-12-18 23:36:30] 2025-12-18 22:35:52,395 | INFO     | stage-out finished correctly
[2025-12-18 23:36:30] 2025-12-18 22:35:52,419 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-18 23:36:30] 2025-12-18 22:35:53,009 | INFO     | time since job start (3107s) is within the limit (174528.0s)
[2025-12-18 23:36:30] 2025-12-18 22:35:53,630 | INFO     | job 6933048868 has state=finished
[2025-12-18 23:36:30] 2025-12-18 22:35:53,630 | INFO     | preparing for final server update for job 6933048868 in state='finished'
[2025-12-18 23:36:30] 2025-12-18 22:35:53,630 | INFO     | this job has now completed (state=finished)
[2025-12-18 23:36:30] 2025-12-18 22:35:53,630 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-18 23:36:30] 2025-12-18 22:35:53,630 | INFO     | log transfer has been attempted: DONE
[2025-12-18 23:36:30] 2025-12-18 22:35:53,630 | INFO     | job 6933048868 has finished - writing final server update
[2025-12-18 23:36:30] 2025-12-18 22:35:53,630 | INFO     | total number of processed events: 400 (read)
[2025-12-18 23:36:30] 2025-12-18 22:35:53,631 | INFO     | executing command: lscpu
[2025-12-18 23:36:30] 2025-12-18 22:35:53,653 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 23:36:30] 2025-12-18 22:35:54,154 | INFO     | PID=4159535 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 23:36:30] 2025-12-18 22:35:54,154 | INFO     | .. there are 3 such processes running
[2025-12-18 23:36:30] 2025-12-18 22:35:55,155 | INFO     | time since job start (3109s) is within the limit (174528.0s)
[2025-12-18 23:36:30] 2025-12-18 22:35:56,745 | WARNING  | process 4166179 can no longer be monitored (due to stat problems) - aborting
[2025-12-18 23:36:30] 2025-12-18 22:35:56,745 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6933048868/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 23:36:30] 2025-12-18 22:35:56,872 | INFO     | number of running child processes to parent process 4166179: 1
[2025-12-18 23:36:30] 2025-12-18 22:35:56,872 | INFO     | maximum number of monitored processes: 6
[2025-12-18 23:36:30] 2025-12-18 22:35:57,162 | INFO     | time since job start (3111s) is within the limit (174528.0s)
[2025-12-18 23:36:30] 2025-12-18 22:35:58,661 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-18 23:36:30] 2025-12-18 22:35:58,662 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 4399.884000000001
[2025-12-18 23:36:30] 2025-12-18 22:35:58,663 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6933048868/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 23:36:30] 2025-12-18 22:35:58,663 | INFO     | extracted standard info from prmon json
[2025-12-18 23:36:30] 2025-12-18 22:35:58,663 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 23:36:30] 2025-12-18 22:35:58,663 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 23:36:30] 2025-12-18 22:35:58,663 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 23:36:30] 2025-12-18 22:35:58,663 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | fitting pss+swap vs Time
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | sum of square deviations: 26400495.0
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | sum of deviations: -2699506444.0
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | mean x: 1766095891.5
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | mean y: 2452753.9545454546
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | intersect: 180589492497.95084
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | chi2: 0.010906758090059096
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | current memory leak: -102.25 B/s (using 44 data points, chi2=0.01)
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | could have reported an average CPU frequency of 4399 MHz (5 samples)
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | ..............................
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | . Timing measurements:
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | . get job = 0 s
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | . initial setup = 1 s
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | . payload setup = 7 s
[2025-12-18 23:36:30] 2025-12-18 22:35:58,664 | INFO     | . stage-in = 0 s
[2025-12-18 23:36:30] 2025-12-18 22:35:58,665 | INFO     | . payload execution = 3079 s
[2025-12-18 23:36:30] 2025-12-18 22:35:58,665 | INFO     | . stage-out = 0 s
[2025-12-18 23:36:30] 2025-12-18 22:35:58,665 | INFO     | . log creation = 0 s
[2025-12-18 23:36:30] 2025-12-18 22:35:58,665 | INFO     | ..............................
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | 
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | job summary report
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | --------------------------------------------------
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | PanDA job id: 6933048868
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | task id: 47929408
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | errors: (none)
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | pilot state: finished 
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | transexitcode: 0
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | exeerrorcode: 0
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | exeerrordiag: 
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | exitcode: 0
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | exitmsg: OK
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | cpuconsumptiontime: 11426 s
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | nevents: 400
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | neventsw: 0
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | pid: 4166179
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | pgrp: 4166179
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | corecount: 4
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | event service: False
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | sizes: {0: 2284047, 5: 2284309, 10: 2284365, 3090: 2309731, 3091: 2318813, 3097: 2318983}
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | --------------------------------------------------
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | 
[2025-12-18 23:36:30] 2025-12-18 22:35:58,692 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-12-18 23:36:30] 2025-12-18 22:35:58,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,713 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | job 6933048868 has completed (purged errors)
[2025-12-18 23:36:30] 2025-12-18 22:35:58,714 | INFO     | overall cleanup function is called
[2025-12-18 23:36:30] 2025-12-18 22:35:59,721 | INFO     | --- collectZombieJob: --- 10, [4166179]
[2025-12-18 23:36:30] 2025-12-18 22:35:59,721 | INFO     | zombie collector waiting for pid 4166179
[2025-12-18 23:36:30] 2025-12-18 22:35:59,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 23:36:30] 2025-12-18 22:35:59,721 | INFO     | collected zombie processes
[2025-12-18 23:36:30] 2025-12-18 22:35:59,721 | INFO     | will attempt to kill all subprocesses of pid=4166179
[2025-12-18 23:36:30] 2025-12-18 22:35:59,824 | INFO     | process IDs to be killed: [4166179] (in reverse order)
[2025-12-18 23:36:30] 2025-12-18 22:35:59,883 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 23:36:30] 2025-12-18 22:35:59,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 23:36:30] 2025-12-18 22:35:59,887 | INFO     | did not find any defunct processes belonging to 4166179
[2025-12-18 23:36:30] 2025-12-18 22:35:59,890 | INFO     | did not find any defunct processes belonging to 4166179
[2025-12-18 23:36:30] 2025-12-18 22:35:59,890 | INFO     | ready for new job
[2025-12-18 23:36:30] 2025-12-18 22:35:59,890 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 23:36:30] 2025-12-18 22:35:59,892 | INFO     | ***************************************
[2025-12-18 23:36:30] 2025-12-18 22:35:59,892 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 23:36:30] 2025-12-18 22:35:59,892 | INFO     | ***************************************
[2025-12-18 23:36:30] 2025-12-18 22:35:59,892 | INFO     | 
[2025-12-18 23:36:30] 2025-12-18 22:35:59,892 | INFO     | pilot is running in a VM
[2025-12-18 23:36:30] 2025-12-18 22:35:59,892 | INFO     | architecture information:
[2025-12-18 23:36:30] 2025-12-18 22:35:59,893 | INFO     | executing command: cat /etc/os-release
[2025-12-18 23:36:30] 2025-12-18 22:35:59,906 | INFO     | cat /etc/os-release:
[2025-12-18 23:36:30] NAME="CentOS Linux"
[2025-12-18 23:36:30] VERSION="7 (Core)"
[2025-12-18 23:36:30] ID="centos"
[2025-12-18 23:36:30] ID_LIKE="rhel fedora"
[2025-12-18 23:36:30] VERSION_ID="7"
[2025-12-18 23:36:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 23:36:30] ANSI_COLOR="0;31"
[2025-12-18 23:36:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 23:36:30] HOME_URL="https://www.centos.org/"
[2025-12-18 23:36:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 23:36:30] 
[2025-12-18 23:36:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 23:36:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 23:36:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 23:36:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 23:36:30] 
[2025-12-18 23:36:30] 2025-12-18 22:35:59,906 | INFO     | ***************************************
[2025-12-18 23:36:30] 2025-12-18 22:36:00,410 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-12-18 23:36:30] 2025-12-18 22:36:00,425 | INFO     | sufficient remaining disk space (146177785856 B)
[2025-12-18 23:36:30] 2025-12-18 22:36:00,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 23:36:30] 2025-12-18 22:36:00,426 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 23:36:30] 2025-12-18 22:36:00,426 | INFO     | update_server=False
[2025-12-18 23:36:30] 2025-12-18 22:36:00,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 23:36:30] 2025-12-18 22:36:00,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 23:36:30] 2025-12-18 22:36:00,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 23:36:30] 2025-12-18 22:36:00,427 | INFO     | aborting loop
[2025-12-18 23:36:30] 2025-12-18 22:36:00,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 23:36:30] 2025-12-18 22:36:00,534 | INFO     | all payload control threads have been joined
[2025-12-18 23:36:30] 2025-12-18 22:36:00,812 | INFO     | all data control threads have been joined
[2025-12-18 23:36:30] 2025-12-18 22:36:01,120 | INFO     | all job control threads have been joined
[2025-12-18 23:36:30] 2025-12-18 22:36:01,429 | INFO     | [job] queue monitor thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:01,431 | INFO     | [job] retrieve thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:01,432 | INFO     | [job] job monitor thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:01,490 | INFO     | [data] copytool_in thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:01,539 | INFO     | [payload] control thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:01,590 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:01,818 | INFO     | [data] control thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:02,116 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:02,126 | INFO     | [job] control thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:02,293 | INFO     | [payload] failed_post thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:02,314 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:02,319 | INFO     | [job] validate thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:02,419 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:02,441 | INFO     | [data] copytool_out thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:02,714 | INFO     | [payload] validate_post thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:02,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 23:36:30] 2025-12-18 22:36:06,955 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 23:36:30] 2025-12-18 22:36:09,752 | INFO     | [monitor] cgroup control has ended
[2025-12-18 23:36:30] 2025-12-18 22:36:11,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127083496863552)>', '<ExcThread(monitor, started 127082847794944)>']
[2025-12-18 23:36:30] 2025-12-18 22:36:16,837 | INFO     | all workflow threads have been joined
[2025-12-18 23:36:30] 2025-12-18 22:36:16,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 23:36:30] 2025-12-18 22:36:16,838 | INFO     | traces error code: 0
[2025-12-18 23:36:30] 2025-12-18 22:36:16,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 23:36:30] 2025-12-18 22:36:30,355 | INFO     | PID=4159535 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 23:36:30] 2025-12-18 22:36:30,355 | INFO     | .. there are 3 such processes running
[2025-12-18 23:36:30] 2025-12-18 22:36:30,355 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 23:36:30] 2025-12-18 22:36:30,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 23:36:30] 2025-12-18 22:36:30,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 23:36:30] 2025-12-18 22:36:30,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 23:36:30] 2025-12-18 22:36:30,355 | INFO     | [monitor] control thread has ended
[2025-12-18 23:36:30] 2025-12-18 22:36:30,416 [wrapper] ==== pilot stdout END ====
[2025-12-18 23:36:30] 2025-12-18 22:36:30,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 23:36:30] 2025-12-18 22:36:30,425 [wrapper] pilotpid: 4159535
[2025-12-18 23:36:30] 2025-12-18 22:36:30,429 [wrapper] Pilot exit status: 0
[2025-12-18 23:36:30] 2025-12-18 22:36:30,446 [wrapper] pandaids: 6933048868
[2025-12-18 23:36:30] 2025-12-18 22:36:30,491 [wrapper] cleanup supervisor_pilot    9739 4159536
[2025-12-18 23:36:30] 2025-12-18 22:36:30,495 [wrapper] Test setup, not cleaning
[2025-12-18 23:36:30] 2025-12-18 22:36:30,500 [wrapper] apfmon messages muted
[2025-12-18 23:36:30] 2025-12-18 22:36:30,504 [wrapper] ==== wrapper stdout END ====
[2025-12-18 23:36:30] 2025-12-18 22:36:30,508 [wrapper] ==== wrapper stderr END ====
[2025-12-18 23:36:30]  *** Error codes and diagnostics ***
[2025-12-18 23:36:30]     "exeErrorCode": 0,
[2025-12-18 23:36:30]     "exeErrorDiag": "",
[2025-12-18 23:36:30]     "pilotErrorCode": 0,
[2025-12-18 23:36:30]     "pilotErrorDiag": "",
[2025-12-18 23:36:30]  *** Listing of results directory ***
[2025-12-18 23:36:30] insgesamt 438248
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc    579449 Dez 18 04:11 pilot3.tar.gz
[2025-12-18 23:36:30] -rwx------ 1 yeti boinc     36322 Dez 18 04:15 runpilot2-wrapper.sh
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc      5112 Dez 18 04:15 queuedata.json
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc       100 Dez 18 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 23:36:30] -rwxr-xr-x 1 yeti boinc      7986 Dez 18 22:43 run_atlas
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc       105 Dez 18 22:43 job.xml
[2025-12-18 23:36:30] -rw-r--r-- 2 yeti boinc 252990247 Dez 18 22:43 EVNT.47929406._000002.pool.root.1
[2025-12-18 23:36:30] -rw-r--r-- 2 yeti boinc     15847 Dez 18 22:43 start_atlas.sh
[2025-12-18 23:36:30] drwxrwx--x 2 yeti boinc      4096 Dez 18 22:43 shared
[2025-12-18 23:36:30] -rw-r--r-- 2 yeti boinc    592413 Dez 18 22:43 input.tar.gz
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc      6730 Dez 18 22:43 init_data.xml
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc         0 Dez 18 22:43 boinc_setup_complete
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc         0 Dez 18 22:43 boinc_lockfile
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc      2571 Dez 18 22:43 pandaJob.out
[2025-12-18 23:36:30] -rw------- 1 yeti boinc        52 Dez 18 22:43 setup.sh.local
[2025-12-18 23:36:30] -rw------- 1 yeti boinc    988848 Dez 18 22:44 agis_schedconf.cvmfs.json
[2025-12-18 23:36:30] -rw------- 1 yeti boinc   1516240 Dez 18 22:44 agis_ddmendpoints.agis.ALL.json
[2025-12-18 23:36:30] drwx------ 5 yeti boinc      4096 Dez 18 22:44 pilot3
[2025-12-18 23:36:30] -rw------- 1 yeti boinc 190380750 Dez 18 23:35 HITS.47929408._000095.pool.root.1
[2025-12-18 23:36:30] -rw------- 1 yeti boinc        95 Dez 18 23:35 pilot_heartbeat.json
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc       529 Dez 18 23:35 boinc_task_state.xml
[2025-12-18 23:36:30] -rw------- 1 yeti boinc      1015 Dez 18 23:35 memory_monitor_summary.json
[2025-12-18 23:36:30] -rw------- 1 yeti boinc    250018 Dez 18 23:35 log.47929408._000095.job.log.tgz.1
[2025-12-18 23:36:30] -rw------- 1 yeti boinc      7727 Dez 18 23:35 heartbeat.json
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc        27 Dez 18 23:36 wrapper_checkpoint.txt
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc      8192 Dez 18 23:36 boinc_mmap_file
[2025-12-18 23:36:30] -rw------- 1 yeti boinc       822 Dez 18 23:36 pilotlog.txt
[2025-12-18 23:36:30] -rw------- 1 yeti boinc    488878 Dez 18 23:36 log.47929408._000095.job.log.1
[2025-12-18 23:36:30] -rw------- 1 yeti boinc       357 Dez 18 23:36 output.list
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc       620 Dez 18 23:36 runtime_log
[2025-12-18 23:36:30] -rw------- 1 yeti boinc    757760 Dez 18 23:36 result.tar.gz
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc      9557 Dez 18 23:36 runtime_log.err
[2025-12-18 23:36:30] -rw------- 1 yeti boinc       639 Dez 18 23:36 nkJKDmDfJq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTMdKDmyTpBTn.diag
[2025-12-18 23:36:30] -rw-r--r-- 1 yeti boinc     21637 Dez 18 23:36 stderr.txt
[2025-12-18 23:36:30] HITS file was successfully produced:
[2025-12-18 23:36:30] -rw------- 1 yeti boinc 190380750 Dez 18 23:35 shared/HITS.pool.root.1
[2025-12-18 23:36:30]  *** Contents of shared directory: ***
[2025-12-18 23:36:30] insgesamt 434328
[2025-12-18 23:36:30] -rw-r--r-- 2 yeti boinc 252990247 Dez 18 22:43 ATLAS.root_0
[2025-12-18 23:36:30] -rw-r--r-- 2 yeti boinc     15847 Dez 18 22:43 start_atlas.sh
[2025-12-18 23:36:30] -rw-r--r-- 2 yeti boinc    592413 Dez 18 22:43 input.tar.gz
[2025-12-18 23:36:30] -rw------- 1 yeti boinc 190380750 Dez 18 23:35 HITS.pool.root.1
[2025-12-18 23:36:30] -rw------- 1 yeti boinc    757760 Dez 18 23:36 result.tar.gz
23:36:32 (4155697): run_atlas exited; CPU time 11505.415437
23:36:32 (4155697): called boinc_finish(0)

</stderr_txt>
]]>

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