Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:26:46 (4082377): wrapper (7.7.26015): starting
22:26:46 (4082377): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 22:26:46] Arguments: --nthreads 4
[2025-12-18 22:26:46] Threads: 4
[2025-12-18 22:26:46] Checking for CVMFS
[2025-12-18 22:26:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 22:26:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 22:26:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 22:26:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 22:26:47] 2.13.1.0 13397 7456 83492 154165 0 57 9033205 10240001 911 130560 0 9986413 99.949 597807 263 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-18 22:26:47] CVMFS is ok
[2025-12-18 22:26:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 22:26:47] Checking for apptainer binary...
[2025-12-18 22:26:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 22:26:47] Running /usr/bin/apptainer --version
[2025-12-18 22:26:47] apptainer version 1.4.5
[2025-12-18 22:26:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 22:26:47] atlas7l1
[2025-12-18 22:26:47] apptainer works
[2025-12-18 22:26:47] Set ATHENA_PROC_NUMBER=4
[2025-12-18 22:26:47] Set ATHENA_CORE_NUMBER=4
[2025-12-18 22:26:47] Starting ATLAS job with PandaID=6933049658
[2025-12-18 22:26:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 23:56:09]  *** The last 200 lines of the pilot log: ***
[2025-12-18 23:56:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-18 23:56:09]  replicas=None
[2025-12-18 23:56:09]  scope=mc23_13p6TeV
[2025-12-18 23:56:09]  status=None
[2025-12-18 23:56:09]  status_code=0
[2025-12-18 23:56:09]  storage_token=
[2025-12-18 23:56:09]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933049658/log.47929408._000550.job.log.tgz.1
[2025-12-18 23:56:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/06/log.47929408._000550.job.log.tgz.1
[2025-12-18 23:56:09]  workdir=None
[2025-12-18 23:56:09] ]
[2025-12-18 23:56:09] 2025-12-18 22:55:08,571 | INFO     | transferring file log.47929408._000550.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933049658/log.47929408._000550.job.log.tgz.1 to /var/li
[2025-12-18 23:56:09] 2025-12-18 22:55:08,571 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933049658/log.47929408._000550.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-18 23:56:09] 2025-12-18 22:55:08,593 | INFO     | adding to output.list: log.47929408._000550.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/06/log.47929408._000550.job.log.tg
[2025-12-18 23:56:09] 2025-12-18 22:55:08,594 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-18 23:56:09] 2025-12-18 22:55:08,594 | INFO     | summary of transferred files:
[2025-12-18 23:56:09] 2025-12-18 22:55:08,595 | INFO     |  -- lfn=log.47929408._000550.job.log.tgz.1, status_code=0, status=transferred
[2025-12-18 23:56:09] 2025-12-18 22:55:08,595 | INFO     | stage-out finished correctly
[2025-12-18 23:56:09] 2025-12-18 22:55:08,999 | INFO     | time since job start (5293s) is within the limit (174528.0s)
[2025-12-18 23:56:09] 2025-12-18 22:55:09,373 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-18 23:56:09] 2025-12-18 22:55:09,424 | INFO     | job 6933049658 has state=finished
[2025-12-18 23:56:09] 2025-12-18 22:55:09,424 | INFO     | preparing for final server update for job 6933049658 in state='finished'
[2025-12-18 23:56:09] 2025-12-18 22:55:09,425 | INFO     | this job has now completed (state=finished)
[2025-12-18 23:56:09] 2025-12-18 22:55:09,425 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-18 23:56:09] 2025-12-18 22:55:09,425 | INFO     | log transfer has been attempted: DONE
[2025-12-18 23:56:09] 2025-12-18 22:55:09,425 | INFO     | job 6933049658 has finished - writing final server update
[2025-12-18 23:56:09] 2025-12-18 22:55:09,426 | INFO     | total number of processed events: 400 (read)
[2025-12-18 23:56:09] 2025-12-18 22:55:09,427 | INFO     | executing command: lscpu
[2025-12-18 23:56:09] 2025-12-18 22:55:09,447 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 23:56:09] 2025-12-18 22:55:11,002 | INFO     | time since job start (5296s) is within the limit (174528.0s)
[2025-12-18 23:56:09] 2025-12-18 22:55:12,241 | INFO     | PID=4086182 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 23:56:09] 2025-12-18 22:55:12,242 | INFO     | .. there are 2 such processes running
[2025-12-18 23:56:09] 2025-12-18 22:55:12,250 | WARNING  | process 4092734 can no longer be monitored (due to stat problems) - aborting
[2025-12-18 23:56:09] 2025-12-18 22:55:12,250 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933049658/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 23:56:09] 2025-12-18 22:55:12,330 | INFO     | number of running child processes to parent process 4092734: 1
[2025-12-18 23:56:09] 2025-12-18 22:55:12,330 | INFO     | maximum number of monitored processes: 6
[2025-12-18 23:56:09] 2025-12-18 22:55:13,242 | INFO     | time since job start (5298s) is within the limit (174528.0s)
[2025-12-18 23:56:09] 2025-12-18 22:55:13,881 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-18 23:56:09] 2025-12-18 22:55:13,882 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2025-12-18 23:56:09] 2025-12-18 22:55:13,883 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6933049658/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 23:56:09] 2025-12-18 22:55:13,884 | INFO     | extracted standard info from prmon json
[2025-12-18 23:56:09] 2025-12-18 22:55:13,884 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 23:56:09] 2025-12-18 22:55:13,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 23:56:09] 2025-12-18 22:55:13,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 23:56:09] 2025-12-18 22:55:13,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 23:56:09] 2025-12-18 22:55:13,885 | INFO     | fitting pss+swap vs Time
[2025-12-18 23:56:09] 2025-12-18 22:55:13,885 | INFO     | sum of square deviations: 158737860.0
[2025-12-18 23:56:09] 2025-12-18 22:55:13,885 | INFO     | sum of deviations: -18742494609.999996
[2025-12-18 23:56:09] 2025-12-18 22:55:13,885 | INFO     | mean x: 1766095950.5
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | mean y: 2556661.675
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | intersect: 208529015522.77512
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | chi2: 0.06527574947085826
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | current memory leak: -118.07 B/s (using 80 data points, chi2=0.07)
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | could have reported an average CPU frequency of 2400 MHz (6 samples)
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | ..............................
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | . Timing measurements:
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | . get job = 0 s
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | . initial setup = 2 s
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | . payload setup = 3 s
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | . stage-in = 0 s
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | . payload execution = 5271 s
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | . stage-out = 0 s
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | . log creation = 0 s
[2025-12-18 23:56:09] 2025-12-18 22:55:13,886 | INFO     | ..............................
[2025-12-18 23:56:09] 2025-12-18 22:55:14,105 | INFO     | 
[2025-12-18 23:56:09] 2025-12-18 22:55:14,106 | INFO     | job summary report
[2025-12-18 23:56:09] 2025-12-18 22:55:14,106 | INFO     | --------------------------------------------------
[2025-12-18 23:56:09] 2025-12-18 22:55:14,106 | INFO     | PanDA job id: 6933049658
[2025-12-18 23:56:09] 2025-12-18 22:55:14,106 | INFO     | task id: 47929408
[2025-12-18 23:56:09] 2025-12-18 22:55:14,106 | INFO     | errors: (none)
[2025-12-18 23:56:09] 2025-12-18 22:55:14,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 23:56:09] 2025-12-18 22:55:14,107 | INFO     | pilot state: finished 
[2025-12-18 23:56:09] 2025-12-18 22:55:14,107 | INFO     | transexitcode: 0
[2025-12-18 23:56:09] 2025-12-18 22:55:14,107 | INFO     | exeerrorcode: 0
[2025-12-18 23:56:09] 2025-12-18 22:55:14,107 | INFO     | exeerrordiag: 
[2025-12-18 23:56:09] 2025-12-18 22:55:14,108 | INFO     | exitcode: 0
[2025-12-18 23:56:09] 2025-12-18 22:55:14,108 | INFO     | exitmsg: OK
[2025-12-18 23:56:09] 2025-12-18 22:55:14,108 | INFO     | cpuconsumptiontime: 20036 s
[2025-12-18 23:56:09] 2025-12-18 22:55:14,108 | INFO     | nevents: 400
[2025-12-18 23:56:09] 2025-12-18 22:55:14,108 | INFO     | neventsw: 0
[2025-12-18 23:56:09] 2025-12-18 22:55:14,108 | INFO     | pid: 4092734
[2025-12-18 23:56:09] 2025-12-18 22:55:14,108 | INFO     | pgrp: 4092734
[2025-12-18 23:56:09] 2025-12-18 22:55:14,108 | INFO     | corecount: 4
[2025-12-18 23:56:09] 2025-12-18 22:55:14,108 | INFO     | event service: False
[2025-12-18 23:56:09] 2025-12-18 22:55:14,109 | INFO     | sizes: {0: 2284053, 3: 2284315, 11: 2284343, 5278: 2310949, 5279: 2320031, 5284: 2320169}
[2025-12-18 23:56:09] 2025-12-18 22:55:14,109 | INFO     | --------------------------------------------------
[2025-12-18 23:56:09] 2025-12-18 22:55:14,109 | INFO     | 
[2025-12-18 23:56:09] 2025-12-18 22:55:14,109 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-12-18 23:56:09] 2025-12-18 22:55:14,122 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,125 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 23:56:09] 2025-12-18 22:55:14,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,125 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 23:56:09] 2025-12-18 22:55:14,125 | INFO     | job 6933049658 has completed (purged errors)
[2025-12-18 23:56:09] 2025-12-18 22:55:14,125 | INFO     | overall cleanup function is called
[2025-12-18 23:56:09] 2025-12-18 22:55:15,134 | INFO     | --- collectZombieJob: --- 10, [4092734]
[2025-12-18 23:56:09] 2025-12-18 22:55:15,134 | INFO     | zombie collector waiting for pid 4092734
[2025-12-18 23:56:09] 2025-12-18 22:55:15,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 23:56:09] 2025-12-18 22:55:15,134 | INFO     | collected zombie processes
[2025-12-18 23:56:09] 2025-12-18 22:55:15,135 | INFO     | will attempt to kill all subprocesses of pid=4092734
[2025-12-18 23:56:09] 2025-12-18 22:55:15,220 | INFO     | process IDs to be killed: [4092734] (in reverse order)
[2025-12-18 23:56:09] 2025-12-18 22:55:15,249 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 23:56:09] 2025-12-18 22:55:15,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 23:56:09] 2025-12-18 22:55:15,256 | INFO     | did not find any defunct processes belonging to 4092734
[2025-12-18 23:56:09] 2025-12-18 22:55:15,261 | INFO     | did not find any defunct processes belonging to 4092734
[2025-12-18 23:56:09] 2025-12-18 22:55:15,261 | INFO     | ready for new job
[2025-12-18 23:56:09] 2025-12-18 22:55:15,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 23:56:09] 2025-12-18 22:55:15,262 | INFO     | ***************************************
[2025-12-18 23:56:09] 2025-12-18 22:55:15,263 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 23:56:09] 2025-12-18 22:55:15,263 | INFO     | ***************************************
[2025-12-18 23:56:09] 2025-12-18 22:55:15,263 | INFO     | 
[2025-12-18 23:56:09] 2025-12-18 22:55:15,263 | INFO     | pilot is running in a VM
[2025-12-18 23:56:09] 2025-12-18 22:55:15,263 | INFO     | architecture information:
[2025-12-18 23:56:09] 2025-12-18 22:55:15,263 | INFO     | executing command: cat /etc/os-release
[2025-12-18 23:56:09] 2025-12-18 22:55:15,274 | INFO     | cat /etc/os-release:
[2025-12-18 23:56:09] NAME="CentOS Linux"
[2025-12-18 23:56:09] VERSION="7 (Core)"
[2025-12-18 23:56:09] ID="centos"
[2025-12-18 23:56:09] ID_LIKE="rhel fedora"
[2025-12-18 23:56:09] VERSION_ID="7"
[2025-12-18 23:56:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 23:56:09] ANSI_COLOR="0;31"
[2025-12-18 23:56:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 23:56:09] HOME_URL="https://www.centos.org/"
[2025-12-18 23:56:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 23:56:09] 
[2025-12-18 23:56:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 23:56:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 23:56:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 23:56:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 23:56:09] 
[2025-12-18 23:56:09] 2025-12-18 22:55:15,275 | INFO     | ***************************************
[2025-12-18 23:56:09] 2025-12-18 22:55:15,778 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-12-18 23:56:09] 2025-12-18 22:55:15,789 | INFO     | sufficient remaining disk space (150602776576 B)
[2025-12-18 23:56:09] 2025-12-18 22:55:15,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 23:56:09] 2025-12-18 22:55:15,790 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 23:56:09] 2025-12-18 22:55:15,790 | INFO     | update_server=False
[2025-12-18 23:56:09] 2025-12-18 22:55:15,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 23:56:09] 2025-12-18 22:55:15,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 23:56:09] 2025-12-18 22:55:15,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 23:56:09] 2025-12-18 22:55:15,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 23:56:09] 2025-12-18 22:55:15,838 | INFO     | aborting loop
[2025-12-18 23:56:09] 2025-12-18 22:55:16,379 | INFO     | all job control threads have been joined
[2025-12-18 23:56:09] 2025-12-18 22:55:16,539 | INFO     | all data control threads have been joined
[2025-12-18 23:56:09] 2025-12-18 22:55:16,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 23:56:09] 2025-12-18 22:55:16,796 | INFO     | [job] retrieve thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:16,796 | INFO     | [job] queue monitor thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:16,844 | INFO     | [job] job monitor thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:17,105 | INFO     | all payload control threads have been joined
[2025-12-18 23:56:09] 2025-12-18 22:55:17,132 | INFO     | [payload] validate_post thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:17,385 | INFO     | [job] control thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:17,545 | INFO     | [data] control thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:17,614 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:18,027 | INFO     | [job] validate thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:18,082 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:18,111 | INFO     | [payload] control thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:18,122 | INFO     | [data] copytool_in thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:18,143 | INFO     | [payload] failed_post thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:18,154 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:18,663 | INFO     | [data] copytool_out thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:19,796 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:26,781 | INFO     | job.realtimelogging is not enabled
[2025-12-18 23:56:09] 2025-12-18 22:55:27,786 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 23:56:09] 2025-12-18 22:55:46,443 | INFO     | PID=4086182 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 23:56:09] 2025-12-18 22:55:46,443 | INFO     | .. there are 2 such processes running
[2025-12-18 23:56:09] 2025-12-18 22:55:46,443 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 23:56:09] 2025-12-18 22:55:46,443 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 23:56:09] 2025-12-18 22:55:46,443 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 23:56:09] 2025-12-18 22:56:02,942 | INFO     | [monitor] cgroup control has ended
[2025-12-18 23:56:09] 2025-12-18 22:56:04,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135547853653824)>', '<ExcThread(monitor, started 135547213309696)>']
[2025-12-18 23:56:09] 2025-12-18 22:56:04,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 23:56:09] 2025-12-18 22:56:04,535 | INFO     | [monitor] control thread has ended
[2025-12-18 23:56:09] 2025-12-18 22:56:09,081 | INFO     | all workflow threads have been joined
[2025-12-18 23:56:09] 2025-12-18 22:56:09,081 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 23:56:09] 2025-12-18 22:56:09,081 | INFO     | traces error code: 0
[2025-12-18 23:56:09] 2025-12-18 22:56:09,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 23:56:09] 2025-12-18 22:56:09,159 [wrapper] ==== pilot stdout END ====
[2025-12-18 23:56:09] 2025-12-18 22:56:09,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 23:56:09] 2025-12-18 22:56:09,167 [wrapper] pilotpid: 4086182
[2025-12-18 23:56:09] 2025-12-18 22:56:09,172 [wrapper] Pilot exit status: 0
[2025-12-18 23:56:09] 2025-12-18 22:56:09,189 [wrapper] pandaids: 6933049658
[2025-12-18 23:56:09] 2025-12-18 22:56:09,218 [wrapper] cleanup supervisor_pilot 4134678 4086183
[2025-12-18 23:56:09] 2025-12-18 22:56:09,222 [wrapper] Test setup, not cleaning
[2025-12-18 23:56:09] 2025-12-18 22:56:09,226 [wrapper] apfmon messages muted
[2025-12-18 23:56:09] 2025-12-18 22:56:09,229 [wrapper] ==== wrapper stdout END ====
[2025-12-18 23:56:09] 2025-12-18 22:56:09,232 [wrapper] ==== wrapper stderr END ====
[2025-12-18 23:56:09]  *** Error codes and diagnostics ***
[2025-12-18 23:56:09]     "exeErrorCode": 0,
[2025-12-18 23:56:09]     "exeErrorDiag": "",
[2025-12-18 23:56:09]     "pilotErrorCode": 0,
[2025-12-18 23:56:09]     "pilotErrorDiag": "",
[2025-12-18 23:56:09]  *** Listing of results directory ***
[2025-12-18 23:56:09] insgesamt 435332
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc    579449 Dez 18 04:11 pilot3.tar.gz
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc      5112 Dez 18 04:15 queuedata.json
[2025-12-18 23:56:09] -rwx------ 1 yeti boinc     36322 Dez 18 04:15 runpilot2-wrapper.sh
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc       100 Dez 18 22:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 23:56:09] -rwxr-xr-x 1 yeti boinc      7986 Dez 18 22:26 run_atlas
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc       105 Dez 18 22:26 job.xml
[2025-12-18 23:56:09] -rw-r--r-- 2 yeti boinc     15847 Dez 18 22:26 start_atlas.sh
[2025-12-18 23:56:09] drwxrwx--x 2 yeti boinc      4096 Dez 18 22:26 shared
[2025-12-18 23:56:09] -rw-r--r-- 2 yeti boinc    592417 Dez 18 22:26 input.tar.gz
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc      6616 Dez 18 22:26 init_data.xml
[2025-12-18 23:56:09] -rw-r--r-- 2 yeti boinc 253564166 Dez 18 22:26 EVNT.47929406._000028.pool.root.1
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc         0 Dez 18 22:26 boinc_setup_complete
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc         0 Dez 18 22:26 boinc_lockfile
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc      2574 Dez 18 22:26 pandaJob.out
[2025-12-18 23:56:09] -rw------- 1 yeti boinc        52 Dez 18 22:26 setup.sh.local
[2025-12-18 23:56:09] -rw------- 1 yeti boinc    988848 Dez 18 22:26 agis_schedconf.cvmfs.json
[2025-12-18 23:56:09] -rw------- 1 yeti boinc   1516240 Dez 18 22:26 agis_ddmendpoints.agis.ALL.json
[2025-12-18 23:56:09] drwx------ 5 yeti boinc      4096 Dez 18 22:26 pilot3
[2025-12-18 23:56:09] -rw------- 1 yeti boinc 186122666 Dez 18 23:54 HITS.47929408._000550.pool.root.1
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc       529 Dez 18 23:54 boinc_task_state.xml
[2025-12-18 23:56:09] -rw------- 1 yeti boinc      1037 Dez 18 23:55 memory_monitor_summary.json
[2025-12-18 23:56:09] -rw------- 1 yeti boinc    289158 Dez 18 23:55 log.47929408._000550.job.log.tgz.1
[2025-12-18 23:56:09] -rw------- 1 yeti boinc      7771 Dez 18 23:55 heartbeat.json
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc      8192 Dez 18 23:55 boinc_mmap_file
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc        27 Dez 18 23:55 wrapper_checkpoint.txt
[2025-12-18 23:56:09] -rw------- 1 yeti boinc        95 Dez 18 23:55 pilot_heartbeat.json
[2025-12-18 23:56:09] -rw------- 1 yeti boinc      4972 Dez 18 23:56 pilotlog.txt
[2025-12-18 23:56:09] -rw------- 1 yeti boinc    795903 Dez 18 23:56 log.47929408._000550.job.log.1
[2025-12-18 23:56:09] -rw------- 1 yeti boinc       357 Dez 18 23:56 output.list
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc       620 Dez 18 23:56 runtime_log
[2025-12-18 23:56:09] -rw------- 1 yeti boinc   1105920 Dez 18 23:56 result.tar.gz
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc      9545 Dez 18 23:56 runtime_log.err
[2025-12-18 23:56:09] -rw------- 1 yeti boinc       638 Dez 18 23:56 QCMMDmgfJq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyhYKDmjp9kLn.diag
[2025-12-18 23:56:09] -rw-r--r-- 1 yeti boinc     21670 Dez 18 23:56 stderr.txt
[2025-12-18 23:56:09] HITS file was successfully produced:
[2025-12-18 23:56:09] -rw------- 1 yeti boinc 186122666 Dez 18 23:54 shared/HITS.pool.root.1
[2025-12-18 23:56:09]  *** Contents of shared directory: ***
[2025-12-18 23:56:09] insgesamt 431072
[2025-12-18 23:56:09] -rw-r--r-- 2 yeti boinc     15847 Dez 18 22:26 start_atlas.sh
[2025-12-18 23:56:09] -rw-r--r-- 2 yeti boinc    592417 Dez 18 22:26 input.tar.gz
[2025-12-18 23:56:09] -rw-r--r-- 2 yeti boinc 253564166 Dez 18 22:26 ATLAS.root_0
[2025-12-18 23:56:09] -rw------- 1 yeti boinc 186122666 Dez 18 23:54 HITS.pool.root.1
[2025-12-18 23:56:09] -rw------- 1 yeti boinc   1105920 Dez 18 23:56 result.tar.gz
23:56:10 (4082377): run_atlas exited; CPU time 20101.494054
23:56:10 (4082377): called boinc_finish(0)

</stderr_txt>
]]>

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