Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:22:54 (1789869): wrapper (7.7.26015): starting
05:22:54 (1789869): wrapper: running run_atlas (--nthreads 12)
[2025-12-18 05:22:54] Arguments: --nthreads 12
[2025-12-18 05:22:54] Threads: 12
[2025-12-18 05:22:54] Checking for CVMFS
[2025-12-18 05:22:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 05:22:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 05:22:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 05:22:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 05:22:55] 2.11.5.0 886365 24926 351900 154152 1 24 38794376 45568001 12518 130560 0 184612404 99.805 109993659 22259 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-18 05:22:55] CVMFS is ok
[2025-12-18 05:22:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 05:22:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 05:22:55] Further information can be found at the LHC@home message board.
[2025-12-18 05:22:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 05:22:55] Checking for apptainer binary...
[2025-12-18 05:22:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 05:22:55] Running /usr/bin/apptainer --version
[2025-12-18 05:22:55] apptainer version 1.4.1-1.el9
[2025-12-18 05:22:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 05:22:55] wns0063.triumf.lcg
[2025-12-18 05:22:55] apptainer works
[2025-12-18 05:22:55] Set ATHENA_PROC_NUMBER=12
[2025-12-18 05:22:55] Set ATHENA_CORE_NUMBER=12
[2025-12-18 05:22:55] Starting ATLAS job with PandaID=6933463448
[2025-12-18 05:22:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 05:26:13]  *** The last 200 lines of the pilot log: ***
[2025-12-18 05:26:13] 2025-12-18 13:25:41,203 | WARNING  | found no stored workdir sizes
[2025-12-18 05:26:13] 2025-12-18 13:25:41,203 | INFO     | will not add max space = 0 B to job metrics
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | WARNING  | wrong length of table data, x=[1766064207.0], y=[1048.0] (must be same and length>=4)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | could have reported an average CPU frequency of 2552 MHz (4 samples)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | ..............................
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . Timing measurements:
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . get job = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . initial setup = 2 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . payload setup = 4 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . stage-in = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . payload execution = 16 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . stage-out = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . log creation = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | ..............................
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-18 05:26:13] 2025-12-18 13:25:41,205 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6933463448/pilotlog.txt
[2025-12-18 05:26:13] 2025-12-18 13:25:41,213 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-18 05:26:13] - Log from pilotlog.txt -
[2025-12-18 05:26:13] 2025-12-18 13:25:41,202 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 05:26:13] 2025-12-18 13:25:41,202 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 05:26:13] 2025-12-18 13:25:41,203 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 05:26:13] 2025-12-18 13:25:41,203 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 05:26:13] 2025-12-18 13:25:41,203 | WARNING  | found no stored workdir sizes
[2025-12-18 05:26:13] 2025-12-18 13:25:41,203 | INFO     | will not add max space = 0 B to job metrics
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | WARNING  | wrong length of table data, x=[1766064207.0], y=[1048.0] (must be same and length>=4)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | could have reported an average CPU frequency of 2552 MHz (4 samples)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | ..............................
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . Timing measurements:
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . get job = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . initial setup = 2 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . payload setup = 4 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . stage-in = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . payload execution = 16 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . stage-out = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . log creation = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | ..............................
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-18 05:26:13] 2025-12-18 13:25:41,205 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6933463448/pilotlog.txt
[2025-12-18 05:26:13] 2025-12-18 13:25:41,214 | WARNING  | 
[2025-12-18 05:26:13] [begin log extracts]
[2025-12-18 05:26:13] - Log from pilotlog.txt -
[2025-12-18 05:26:13] 2025-12-18 13:25:41,202 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 05:26:13] 2025-12-18 13:25:41,202 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 05:26:13] 2025-12-18 13:25:41,203 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 05:26:13] 2025-12-18 13:25:41,203 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 05:26:13] 2025-12-18 13:25:41,203 | WARNING  | found no stored workdir sizes
[2025-12-18 05:26:13] 2025-12-18 13:25:41,203 | INFO     | will not add max space = 0 B to job metrics
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | WARNING  | wrong length of table data, x=[1766064207.0], y=[1048.0] (must be same and length>=4)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | could have reported an average CPU frequency of 2552 MHz (4 samples)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | ..............................
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . Timing measurements:
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . get job = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . initial setup = 2 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . payload setup = 4 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . stage-in = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . payload execution = 16 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . stage-out = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | . log creation = 0 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | ..............................
[2025-12-18 05:26:13] 2025-12-18 13:25:41,204 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-18 05:26:13] 2025-12-18 13:25:41,205 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6933463448/pilotlog.txt
[2025-12-18 05:26:13] [end log extracts]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,214 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,215 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-18 05:26:13] 2025-12-18 13:25:41,400 | INFO     | 
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | job summary report
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | --------------------------------------------------
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | PanDA job id: 6933463448
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | task id: 47886933
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-18 05:23:34,587 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | pilot state: failed 
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | transexitcode: 65
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | exeerrorcode: 65
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | exitcode: 65
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | cpuconsumptiontime: 16 s
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | nevents: 0
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | neventsw: 0
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | pid: 1800006
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | pgrp: 1800006
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | corecount: 12
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | event service: False
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | sizes: {0: 2283141, 1: 2283994, 4: 2284256, 11: 2284284, 24: 2311714, 143: 2311852}
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | --------------------------------------------------
[2025-12-18 05:26:13] 2025-12-18 13:25:41,401 | INFO     | 
[2025-12-18 05:26:13] 2025-12-18 13:25:41,402 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-18 05:26:13] 2025-12-18 13:25:41,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | job 6933463448 has completed (purged errors)
[2025-12-18 05:26:13] 2025-12-18 13:25:41,415 | INFO     | overall cleanup function is called
[2025-12-18 05:26:13] 2025-12-18 13:25:42,421 | INFO     | --- collectZombieJob: --- 10, [1800006]
[2025-12-18 05:26:13] 2025-12-18 13:25:42,421 | INFO     | zombie collector waiting for pid 1800006
[2025-12-18 05:26:13] 2025-12-18 13:25:42,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 05:26:13] 2025-12-18 13:25:42,421 | INFO     | collected zombie processes
[2025-12-18 05:26:13] 2025-12-18 13:25:42,422 | INFO     | will attempt to kill all subprocesses of pid=1800006
[2025-12-18 05:26:13] 2025-12-18 13:25:42,552 | INFO     | process IDs to be killed: [1800006] (in reverse order)
[2025-12-18 05:26:13] 2025-12-18 13:25:42,603 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 05:26:13] 2025-12-18 13:25:42,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 05:26:13] 2025-12-18 13:25:42,609 | INFO     | did not find any defunct processes belonging to 1800006
[2025-12-18 05:26:13] 2025-12-18 13:25:42,613 | INFO     | did not find any defunct processes belonging to 1800006
[2025-12-18 05:26:13] 2025-12-18 13:25:42,614 | INFO     | ready for new job
[2025-12-18 05:26:13] 2025-12-18 13:25:42,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 05:26:13] 2025-12-18 13:25:42,615 | INFO     | ***************************************
[2025-12-18 05:26:13] 2025-12-18 13:25:42,615 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 05:26:13] 2025-12-18 13:25:42,615 | INFO     | ***************************************
[2025-12-18 05:26:13] 2025-12-18 13:25:42,615 | INFO     | 
[2025-12-18 05:26:13] 2025-12-18 13:25:42,617 | INFO     | architecture information:
[2025-12-18 05:26:13] 2025-12-18 13:25:42,617 | INFO     | executing command: cat /etc/os-release
[2025-12-18 05:26:13] 2025-12-18 13:25:42,626 | INFO     | cat /etc/os-release:
[2025-12-18 05:26:13] NAME="CentOS Linux"
[2025-12-18 05:26:13] VERSION="7 (Core)"
[2025-12-18 05:26:13] ID="centos"
[2025-12-18 05:26:13] ID_LIKE="rhel fedora"
[2025-12-18 05:26:13] VERSION_ID="7"
[2025-12-18 05:26:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 05:26:13] ANSI_COLOR="0;31"
[2025-12-18 05:26:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 05:26:13] HOME_URL="https://www.centos.org/"
[2025-12-18 05:26:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 05:26:13] 
[2025-12-18 05:26:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 05:26:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 05:26:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 05:26:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 05:26:13] 
[2025-12-18 05:26:13] 2025-12-18 13:25:42,627 | INFO     | ***************************************
[2025-12-18 05:26:13] 2025-12-18 13:25:43,129 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-18 05:26:13] 2025-12-18 13:25:43,139 | INFO     | sufficient remaining disk space (1986152890368 B)
[2025-12-18 05:26:13] 2025-12-18 13:25:43,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 05:26:13] 2025-12-18 13:25:43,140 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 05:26:13] 2025-12-18 13:25:43,140 | INFO     | update_server=False
[2025-12-18 05:26:13] 2025-12-18 13:25:43,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 05:26:13] 2025-12-18 13:25:43,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 05:26:13] 2025-12-18 13:25:43,140 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 05:26:13] 2025-12-18 13:25:43,351 | INFO     | all data control threads have been joined
[2025-12-18 05:26:13] 2025-12-18 13:25:43,776 | INFO     | all job control threads have been joined
[2025-12-18 05:26:13] 2025-12-18 13:25:43,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 05:26:13] 2025-12-18 13:25:43,868 | INFO     | aborting loop
[2025-12-18 05:26:13] 2025-12-18 13:25:44,145 | INFO     | [job] retrieve thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:44,146 | INFO     | [job] queue monitor thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:44,241 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:44,243 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:44,351 | INFO     | [payload] validate_post thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:44,357 | INFO     | [data] control thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:44,517 | INFO     | all payload control threads have been joined
[2025-12-18 05:26:13] 2025-12-18 13:25:44,633 | INFO     | [data] copytool_in thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:44,716 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:44,781 | INFO     | [job] control thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:44,873 | INFO     | [job] job monitor thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:44,966 | INFO     | [payload] failed_post thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:45,143 | INFO     | [data] copytool_out thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:45,465 | INFO     | [job] validate thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:45,522 | INFO     | [payload] control thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:45,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 05:26:13] 2025-12-18 13:25:45,608 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:25:49,542 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 05:26:13] 2025-12-18 13:26:03,182 | INFO     | [monitor] cgroup control has ended
[2025-12-18 05:26:13] 2025-12-18 13:26:05,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139997173897024)>', '<ExcThread(monitor, started 139996640032512)>']
[2025-12-18 05:26:13] 2025-12-18 13:26:10,068 | INFO     | all workflow threads have been joined
[2025-12-18 05:26:13] 2025-12-18 13:26:10,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 05:26:13] 2025-12-18 13:26:10,068 | INFO     | traces error code: 0
[2025-12-18 05:26:13] 2025-12-18 13:26:10,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 05:26:13] 2025-12-18 13:26:12,906 | INFO     | PID=1793504 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 05:26:13] 2025-12-18 13:26:12,906 | INFO     | .. there are 14 such processes running
[2025-12-18 05:26:13] 2025-12-18 13:26:12,907 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 05:26:13] 2025-12-18 13:26:12,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 05:26:13] 2025-12-18 13:26:12,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 05:26:13] 2025-12-18 13:26:12,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 05:26:13] 2025-12-18 13:26:12,908 | CRITICAL | thread 'MainThread' is not alive
[2025-12-18 05:26:13] 2025-12-18 13:26:12,908 | INFO     | [monitor] control thread has ended
[2025-12-18 05:26:13] 2025-12-18 13:26:13,064 [wrapper] ==== pilot stdout END ====
[2025-12-18 05:26:13] 2025-12-18 13:26:13,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 05:26:13] 2025-12-18 13:26:13,068 [wrapper] pilotpid: 1793504
[2025-12-18 05:26:13] 2025-12-18 13:26:13,070 [wrapper] Pilot exit status: 0
[2025-12-18 05:26:13] 2025-12-18 13:26:13,076 [wrapper] pandaids: 6933463448
[2025-12-18 05:26:13] 2025-12-18 13:26:13,110 [wrapper] cleanup supervisor_pilot 1793510 1793505
[2025-12-18 05:26:13] 2025-12-18 13:26:13,111 [wrapper] Test setup, not cleaning
[2025-12-18 05:26:13] 2025-12-18 13:26:13,113 [wrapper] apfmon messages muted
[2025-12-18 05:26:13] 2025-12-18 13:26:13,115 [wrapper] ==== wrapper stdout END ====
[2025-12-18 05:26:13] 2025-12-18 13:26:13,116 [wrapper] ==== wrapper stderr END ====
[2025-12-18 05:26:13]  *** Error codes and diagnostics ***
[2025-12-18 05:26:13]     "exeErrorCode": 65,
[2025-12-18 05:26:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-18 05:26:13]     "pilotErrorCode": 1305,
[2025-12-18 05:26:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-18 05:26:13]  *** Listing of results directory ***
[2025-12-18 05:26:13] total 189492
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc    579449 Dec 18 00:05 pilot3.tar.gz
[2025-12-18 05:26:13] -rwx------. 1 boinc boinc     36322 Dec 18 00:05 runpilot2-wrapper.sh
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc      5112 Dec 18 00:06 queuedata.json
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc       100 Dec 18 05:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 05:26:13] -rwxr-xr-x. 1 boinc boinc      7986 Dec 18 05:22 run_atlas
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc       105 Dec 18 05:22 job.xml
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc      6596 Dec 18 05:22 init_data.xml
[2025-12-18 05:26:13] -rw-r--r--. 2 boinc boinc 189929500 Dec 18 05:22 EVNT.47886929._000618.pool.root.1
[2025-12-18 05:26:13] -rw-r--r--. 2 boinc boinc     15847 Dec 18 05:22 start_atlas.sh
[2025-12-18 05:26:13] drwxrwx--x. 2 boinc boinc      4096 Dec 18 05:22 shared
[2025-12-18 05:26:13] -rw-r--r--. 2 boinc boinc    592394 Dec 18 05:22 input.tar.gz
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc         0 Dec 18 05:22 boinc_lockfile
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc      2515 Dec 18 05:22 pandaJob.out
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc    988133 Dec 18 05:23 agis_schedconf.cvmfs.json
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc   1516240 Dec 18 05:23 agis_ddmendpoints.agis.ALL.json
[2025-12-18 05:26:13] drwx------. 5 boinc boinc      4096 Dec 18 05:23 pilot3
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc       521 Dec 18 05:23 boinc_task_state.xml
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc       952 Dec 18 05:23 memory_monitor_summary.json
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc     20588 Dec 18 05:23 log.47886933._014930.job.log.tgz.1
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc      8385 Dec 18 05:25 heartbeat.json
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc        22 Dec 18 05:26 wrapper_checkpoint.txt
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc      8192 Dec 18 05:26 boinc_mmap_file
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc        95 Dec 18 05:26 pilot_heartbeat.json
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc       893 Dec 18 05:26 pilotlog.txt
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc     81449 Dec 18 05:26 log.47886933._014930.job.log.1
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc       188 Dec 18 05:26 output.list
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc       620 Dec 18 05:26 runtime_log
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc    122880 Dec 18 05:26 result.tar.gz
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc       647 Dec 18 05:26 sAdLDmvBOq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdxYKDmAhCVvm.diag
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc      8636 Dec 18 05:26 runtime_log.err
[2025-12-18 05:26:13] -rw-r--r--. 1 boinc boinc     21612 Dec 18 05:26 stderr.txt
[2025-12-18 05:26:13] No HITS result produced
[2025-12-18 05:26:13]  *** Contents of shared directory: ***
[2025-12-18 05:26:13] total 186196
[2025-12-18 05:26:13] -rw-r--r--. 2 boinc boinc 189929500 Dec 18 05:22 ATLAS.root_0
[2025-12-18 05:26:13] -rw-r--r--. 2 boinc boinc     15847 Dec 18 05:22 start_atlas.sh
[2025-12-18 05:26:13] -rw-r--r--. 2 boinc boinc    592394 Dec 18 05:22 input.tar.gz
[2025-12-18 05:26:13] -rw-------. 1 boinc boinc    122880 Dec 18 05:26 result.tar.gz
05:26:14 (1789869): run_atlas exited; CPU time 20.196796
05:26:14 (1789869): called boinc_finish(0)

</stderr_txt>
]]>

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