Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:55:22 (2382): wrapper (7.7.26015): starting
20:55:22 (2382): wrapper: running run_atlas (--nthreads 8)
[2025-12-18 20:55:22] Arguments: --nthreads 8
[2025-12-18 20:55:22] Threads: 8
[2025-12-18 20:55:22] Checking for CVMFS
[2025-12-18 20:55:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 20:55:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 20:55:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 20:55:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 20:55:24] 2.11.2.0 6904 4183 66520 154163 2 262 16399577 25165824 2114 130560 0 3000184 99.879 1375507 2138 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-18 20:55:24] CVMFS is ok
[2025-12-18 20:55:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 20:55:24] Checking for apptainer binary...
[2025-12-18 20:55:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 20:55:24] Running /usr/bin/apptainer --version
[2025-12-18 20:55:24] apptainer version 1.3.2-1.el7
[2025-12-18 20:55:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 20:55:28] cg-vwn474.simple-grid.lan
[2025-12-18 20:55:28] apptainer works
[2025-12-18 20:55:28] Set ATHENA_PROC_NUMBER=8
[2025-12-18 20:55:28] Set ATHENA_CORE_NUMBER=8
[2025-12-18 20:55:28] Starting ATLAS job with PandaID=6933463531
[2025-12-18 20:55:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 00:58:49]  *** The last 200 lines of the pilot log: ***
[2025-12-19 00:58:49] 2025-12-18 23:57:42,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,051 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-19 00:58:49] 2025-12-18 23:57:43,052 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-12-19 00:58:49] 2025-12-18 23:57:43,053 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6933463531/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,054 | INFO     | extracted standard info from prmon json
[2025-12-19 00:58:49] 2025-12-18 23:57:43,054 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 00:58:49] 2025-12-18 23:57:43,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 00:58:49] 2025-12-18 23:57:43,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 00:58:49] 2025-12-18 23:57:43,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 00:58:49] 2025-12-18 23:57:43,058 | INFO     | fitting pss+swap vs Time
[2025-12-19 00:58:49] 2025-12-18 23:57:43,059 | INFO     | sum of square deviations: 3531973200.0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,060 | INFO     | sum of deviations: 58353718862.00002
[2025-12-19 00:58:49] 2025-12-18 23:57:43,061 | INFO     | mean x: 1766095263.0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,061 | INFO     | mean y: 2446311.657777778
[2025-12-19 00:58:49] 2025-12-18 23:57:43,061 | INFO     | intersect: -29176208401.97708
[2025-12-19 00:58:49] 2025-12-18 23:57:43,072 | INFO     | chi2: 3.4470753851602405
[2025-12-19 00:58:49] 2025-12-18 23:57:43,073 | INFO     | sum of square deviations: 3301699115.0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,074 | INFO     | sum of deviations: 57116054512.5
[2025-12-19 00:58:49] 2025-12-18 23:57:43,075 | INFO     | mean x: 1766095110.5
[2025-12-19 00:58:49] 2025-12-18 23:57:43,075 | INFO     | mean y: 2445492.022727273
[2025-12-19 00:58:49] 2025-12-18 23:57:43,075 | INFO     | intersect: -30549213242.50666
[2025-12-19 00:58:49] 2025-12-18 23:57:43,075 | INFO     | chi2: 3.450722609846975
[2025-12-19 00:58:49] 2025-12-18 23:57:43,075 | INFO     | current chi2=3.450722609846975 (change=-0.10580635115889589 %)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,075 | INFO     | right removable region: 219
[2025-12-19 00:58:49] 2025-12-18 23:57:43,076 | INFO     | sum of square deviations: 3301699115.0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,077 | INFO     | sum of deviations: -6417998856.000001
[2025-12-19 00:58:49] 2025-12-18 23:57:43,077 | INFO     | mean x: 1766095415.5
[2025-12-19 00:58:49] 2025-12-18 23:57:43,078 | INFO     | mean y: 2489084.5272727273
[2025-12-19 00:58:49] 2025-12-18 23:57:43,078 | INFO     | intersect: 3435508860.548216
[2025-12-19 00:58:49] 2025-12-18 23:57:43,078 | INFO     | chi2: 0.09600265165302217
[2025-12-19 00:58:49] 2025-12-18 23:57:43,078 | INFO     | current chi2=0.09600265165302217 (change=97.2149535207058 %)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,078 | INFO     | sum of square deviations: 3081657780.0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,080 | INFO     | sum of deviations: -14662440802.0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,080 | INFO     | mean x: 1766095568.0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,080 | INFO     | mean y: 2494751.023255814
[2025-12-19 00:58:49] 2025-12-18 23:57:43,080 | INFO     | intersect: 8405527652.513883
[2025-12-19 00:58:49] 2025-12-18 23:57:43,081 | INFO     | chi2: 0.014978638486167444
[2025-12-19 00:58:49] 2025-12-18 23:57:43,081 | INFO     | current chi2=0.014978638486167444 (change=84.39768253453663 %)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,081 | INFO     | sum of square deviations: 2871616632.5
[2025-12-19 00:58:49] 2025-12-18 23:57:43,083 | INFO     | sum of deviations: -14543991367.999998
[2025-12-19 00:58:49] 2025-12-18 23:57:43,083 | INFO     | mean x: 1766095720.5
[2025-12-19 00:58:49] 2025-12-18 23:57:43,083 | INFO     | mean y: 2494662.476190476
[2025-12-19 00:58:49] 2025-12-18 23:57:43,083 | INFO     | intersect: 8947310144.91463
[2025-12-19 00:58:49] 2025-12-18 23:57:43,083 | INFO     | chi2: 0.014293163135796042
[2025-12-19 00:58:49] 2025-12-18 23:57:43,084 | INFO     | current chi2=0.014293163135796042 (change=4.576352857467174 %)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,084 | INFO     | left removable region: 30
[2025-12-19 00:58:49] 2025-12-18 23:57:43,084 | INFO     | sum of square deviations: 2093397390.0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,085 | INFO     | sum of deviations: -11462813902.000002
[2025-12-19 00:58:49] 2025-12-18 23:57:43,085 | INFO     | mean x: 1766095995.0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,086 | INFO     | mean y: 2492784.798941799
[2025-12-19 00:58:49] 2025-12-18 23:57:43,086 | INFO     | intersect: 9673102780.043337
[2025-12-19 00:58:49] 2025-12-18 23:57:43,086 | INFO     | chi2: 0.013663180728147359
[2025-12-19 00:58:49] 2025-12-18 23:57:43,086 | INFO     | current memory leak: -5.48 B/s (using 189 data points, chi2=0.01)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,087 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,087 | INFO     | ..............................
[2025-12-19 00:58:49] 2025-12-18 23:57:43,087 | INFO     | . Timing measurements:
[2025-12-19 00:58:49] 2025-12-18 23:57:43,087 | INFO     | . get job = 0 s
[2025-12-19 00:58:49] 2025-12-18 23:57:43,087 | INFO     | . initial setup = 5 s
[2025-12-19 00:58:49] 2025-12-18 23:57:43,087 | INFO     | . payload setup = 131 s
[2025-12-19 00:58:49] 2025-12-18 23:57:43,087 | INFO     | . stage-in = 0 s
[2025-12-19 00:58:49] 2025-12-18 23:57:43,088 | INFO     | . payload execution = 13878 s
[2025-12-19 00:58:49] 2025-12-18 23:57:43,088 | INFO     | . stage-out = 3 s
[2025-12-19 00:58:49] 2025-12-18 23:57:43,088 | INFO     | . log creation = 1 s
[2025-12-19 00:58:49] 2025-12-18 23:57:43,088 | INFO     | ..............................
[2025-12-19 00:58:49] 2025-12-18 23:57:43,233 | INFO     | 
[2025-12-19 00:58:49] 2025-12-18 23:57:43,233 | INFO     | job summary report
[2025-12-19 00:58:49] 2025-12-18 23:57:43,234 | INFO     | --------------------------------------------------
[2025-12-19 00:58:49] 2025-12-18 23:57:43,234 | INFO     | PanDA job id: 6933463531
[2025-12-19 00:58:49] 2025-12-18 23:57:43,234 | INFO     | task id: 47886933
[2025-12-19 00:58:49] 2025-12-18 23:57:43,234 | INFO     | errors: (none)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,234 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 00:58:49] 2025-12-18 23:57:43,234 | INFO     | pilot state: finished 
[2025-12-19 00:58:49] 2025-12-18 23:57:43,234 | INFO     | transexitcode: 0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,234 | INFO     | exeerrorcode: 0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,234 | INFO     | exeerrordiag: 
[2025-12-19 00:58:49] 2025-12-18 23:57:43,234 | INFO     | exitcode: 0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,235 | INFO     | exitmsg: OK
[2025-12-19 00:58:49] 2025-12-18 23:57:43,235 | INFO     | cpuconsumptiontime: 53025 s
[2025-12-19 00:58:49] 2025-12-18 23:57:43,235 | INFO     | nevents: 400
[2025-12-19 00:58:49] 2025-12-18 23:57:43,235 | INFO     | neventsw: 0
[2025-12-19 00:58:49] 2025-12-18 23:57:43,235 | INFO     | pid: 12814
[2025-12-19 00:58:49] 2025-12-18 23:57:43,235 | INFO     | pgrp: 12814
[2025-12-19 00:58:49] 2025-12-18 23:57:43,235 | INFO     | corecount: 8
[2025-12-19 00:58:49] 2025-12-18 23:57:43,235 | INFO     | event service: False
[2025-12-19 00:58:49] 2025-12-18 23:57:43,235 | INFO     | sizes: {0: 2283796, 1: 2283995, 12: 2283995, 22: 2284023, 33: 2284051, 44: 2284107, 55: 2284263, 65: 2284291, 76: 2284319, 87: 2284665, 97: 2284665, 14014: 2314884
[2025-12-19 00:58:49] 2025-12-18 23:57:43,235 | INFO     | --------------------------------------------------
[2025-12-19 00:58:49] 2025-12-18 23:57:43,236 | INFO     | 
[2025-12-19 00:58:49] 2025-12-18 23:57:43,236 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-19 00:58:49] 2025-12-18 23:57:43,837 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,837 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,837 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,837 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,839 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,839 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 00:58:49] 2025-12-18 23:57:43,839 | INFO     | job 6933463531 has completed (purged errors)
[2025-12-19 00:58:49] 2025-12-18 23:57:43,839 | INFO     | overall cleanup function is called
[2025-12-19 00:58:49] 2025-12-18 23:57:44,848 | INFO     | --- collectZombieJob: --- 10, [12814]
[2025-12-19 00:58:49] 2025-12-18 23:57:44,848 | INFO     | zombie collector waiting for pid 12814
[2025-12-19 00:58:49] 2025-12-18 23:57:44,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 00:58:49] 2025-12-18 23:57:44,849 | INFO     | collected zombie processes
[2025-12-19 00:58:49] 2025-12-18 23:57:44,849 | INFO     | will attempt to kill all subprocesses of pid=12814
[2025-12-19 00:58:49] 2025-12-18 23:57:44,962 | INFO     | process IDs to be killed: [12814] (in reverse order)
[2025-12-19 00:58:49] 2025-12-18 23:57:46,033 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 00:58:49] 2025-12-18 23:57:46,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 00:58:49] 2025-12-18 23:57:46,036 | INFO     | did not find any defunct processes belonging to 12814
[2025-12-19 00:58:49] 2025-12-18 23:57:46,039 | INFO     | did not find any defunct processes belonging to 12814
[2025-12-19 00:58:49] 2025-12-18 23:57:46,039 | INFO     | ready for new job
[2025-12-19 00:58:49] 2025-12-18 23:57:46,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 00:58:49] 2025-12-18 23:57:46,045 | INFO     | ***************************************
[2025-12-19 00:58:49] 2025-12-18 23:57:46,045 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 00:58:49] 2025-12-18 23:57:46,046 | INFO     | ***************************************
[2025-12-19 00:58:49] 2025-12-18 23:57:46,046 | INFO     | 
[2025-12-19 00:58:49] 2025-12-18 23:57:46,046 | INFO     | pilot is running in a VM
[2025-12-19 00:58:49] 2025-12-18 23:57:46,046 | INFO     | architecture information:
[2025-12-19 00:58:49] 2025-12-18 23:57:46,059 | INFO     | executing command: cat /etc/os-release
[2025-12-19 00:58:49] 2025-12-18 23:57:46,275 | INFO     | cat /etc/os-release:
[2025-12-19 00:58:49] NAME="CentOS Linux"
[2025-12-19 00:58:49] VERSION="7 (Core)"
[2025-12-19 00:58:49] ID="centos"
[2025-12-19 00:58:49] ID_LIKE="rhel fedora"
[2025-12-19 00:58:49] VERSION_ID="7"
[2025-12-19 00:58:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 00:58:49] ANSI_COLOR="0;31"
[2025-12-19 00:58:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 00:58:49] HOME_URL="https://www.centos.org/"
[2025-12-19 00:58:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 00:58:49] 
[2025-12-19 00:58:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 00:58:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 00:58:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 00:58:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 00:58:49] 
[2025-12-19 00:58:49] 2025-12-18 23:57:46,276 | INFO     | ***************************************
[2025-12-19 00:58:49] 2025-12-18 23:57:46,779 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-19 00:58:49] 2025-12-18 23:57:46,964 | INFO     | sufficient remaining disk space (495082012672 B)
[2025-12-19 00:58:49] 2025-12-18 23:57:46,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 00:58:49] 2025-12-18 23:57:46,964 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 00:58:49] 2025-12-18 23:57:46,964 | INFO     | update_server=False
[2025-12-19 00:58:49] 2025-12-18 23:57:46,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 00:58:49] 2025-12-18 23:57:46,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 00:58:49] 2025-12-18 23:57:46,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 00:58:49] 2025-12-18 23:57:46,965 | INFO     | aborting loop
[2025-12-19 00:58:49] 2025-12-18 23:57:47,610 | INFO     | all data control threads have been joined
[2025-12-19 00:58:49] 2025-12-18 23:57:47,720 | INFO     | all payload control threads have been joined
[2025-12-19 00:58:49] 2025-12-18 23:57:47,970 | INFO     | [job] retrieve thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:47,971 | INFO     | [job] job monitor thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:48,038 | INFO     | [payload] validate_post thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:48,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 00:58:49] 2025-12-18 23:57:48,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 00:58:49] 2025-12-18 23:57:48,352 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:48,367 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:48,433 | INFO     | all job control threads have been joined
[2025-12-19 00:58:49] 2025-12-18 23:57:48,536 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:48,616 | INFO     | [data] control thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:48,726 | INFO     | [payload] control thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:48,804 | INFO     | [data] copytool_in thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:48,972 | INFO     | [data] copytool_out thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:49,037 | INFO     | [payload] failed_post thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:49,257 | INFO     | [job] queue monitor thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:49,271 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:49,325 | INFO     | [job] validate thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:49,439 | INFO     | [job] control thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:57:52,321 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 00:58:49] 2025-12-18 23:58:15,257 | INFO     | PID=6161 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-19 00:58:49] 2025-12-18 23:58:15,257 | INFO     | .. there are 9 such processes running
[2025-12-19 00:58:49] 2025-12-18 23:58:15,257 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 00:58:49] 2025-12-18 23:58:15,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 00:58:49] 2025-12-18 23:58:15,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 00:58:49] 2025-12-18 23:58:39,272 | INFO     | [monitor] cgroup control has ended
[2025-12-19 00:58:49] 2025-12-18 23:58:40,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018219059008)>', '<ExcThread(monitor, started 140017376671488)>']
[2025-12-19 00:58:49] 2025-12-18 23:58:40,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 00:58:49] 2025-12-18 23:58:40,406 | INFO     | [monitor] control thread has ended
[2025-12-19 00:58:49] 2025-12-18 23:58:45,114 | INFO     | all workflow threads have been joined
[2025-12-19 00:58:49] 2025-12-18 23:58:45,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 00:58:49] 2025-12-18 23:58:45,115 | INFO     | traces error code: 0
[2025-12-19 00:58:49] 2025-12-18 23:58:45,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 00:58:49] 2025-12-18 23:58:45,375 [wrapper] ==== pilot stdout END ====
[2025-12-19 00:58:49] 2025-12-18 23:58:45,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 00:58:49] 2025-12-18 23:58:45,502 [wrapper] pilotpid: 6161
[2025-12-19 00:58:49] 2025-12-18 23:58:45,624 [wrapper] Pilot exit status: 0
[2025-12-19 00:58:49] 2025-12-18 23:58:45,998 [wrapper] pandaids: 6933463531
[2025-12-19 00:58:49] 2025-12-18 23:58:46,926 [wrapper] cleanup supervisor_pilot  4235 6162
[2025-12-19 00:58:49] 2025-12-18 23:58:47,079 [wrapper] Test setup, not cleaning
[2025-12-19 00:58:49] 2025-12-18 23:58:47,176 [wrapper] apfmon messages muted
[2025-12-19 00:58:49] 2025-12-18 23:58:47,247 [wrapper] ==== wrapper stdout END ====
[2025-12-19 00:58:49] 2025-12-18 23:58:47,344 [wrapper] ==== wrapper stderr END ====
[2025-12-19 00:58:49]  *** Error codes and diagnostics ***
[2025-12-19 00:58:49]     "exeErrorCode": 0,
[2025-12-19 00:58:49]     "exeErrorDiag": "",
[2025-12-19 00:58:49]     "pilotErrorCode": 0,
[2025-12-19 00:58:49]     "pilotErrorDiag": "",
[2025-12-19 00:58:49]  *** Listing of results directory ***
[2025-12-19 00:58:50] total 337352
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc      5112 Dec 18 09:05 queuedata.json
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc    579449 Dec 18 09:05 pilot3.tar.gz
[2025-12-19 00:58:50] -rwx------. 1 boinc boinc     36322 Dec 18 09:05 runpilot2-wrapper.sh
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc       100 Dec 18 20:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 00:58:50] -rwxr-xr-x. 1 boinc boinc      7986 Dec 18 20:55 run_atlas
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc       105 Dec 18 20:55 job.xml
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc      6392 Dec 18 20:55 init_data.xml
[2025-12-19 00:58:50] -rw-r--r--. 2 boinc boinc 192010162 Dec 18 20:55 EVNT.47886929._000622.pool.root.1
[2025-12-19 00:58:50] -rw-r--r--. 2 boinc boinc     15847 Dec 18 20:55 start_atlas.sh
[2025-12-19 00:58:50] drwxrwx--x. 2 boinc boinc        68 Dec 18 20:55 shared
[2025-12-19 00:58:50] -rw-r--r--. 2 boinc boinc    592396 Dec 18 20:55 input.tar.gz
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc         0 Dec 18 20:55 boinc_lockfile
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc      2514 Dec 18 20:55 pandaJob.out
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc    988880 Dec 18 20:59 agis_schedconf.cvmfs.json
[2025-12-19 00:58:50] drwx------. 5 boinc boinc      4096 Dec 18 20:59 pilot3
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc 144846640 Dec 19 00:54 HITS.47886933._015013.pool.root.1
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc       531 Dec 19 00:55 boinc_task_state.xml
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc      1015 Dec 19 00:55 memory_monitor_summary.json
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc   1516240 Dec 19 00:56 agis_ddmendpoints.agis.ALL.json
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc    440675 Dec 19 00:56 log.47886933._015013.job.log.tgz.1
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc        95 Dec 19 00:57 pilot_heartbeat.json
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc      7788 Dec 19 00:57 heartbeat.json
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc        28 Dec 19 00:58 wrapper_checkpoint.txt
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc      8192 Dec 19 00:58 boinc_mmap_file
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc      4883 Dec 19 00:58 pilotlog.txt
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc   1908385 Dec 19 00:58 log.47886933._015013.job.log.1
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc       357 Dec 19 00:58 output.list
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc       620 Dec 19 00:58 runtime_log
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc   2365440 Dec 19 00:58 result.tar.gz
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc      8817 Dec 19 00:58 runtime_log.err
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc       656 Dec 19 00:58 FEdKDmwBOq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiedKDmy0F2nm.diag
[2025-12-19 00:58:50] -rw-r--r--. 1 boinc boinc     20793 Dec 19 00:58 stderr.txt
[2025-12-19 00:58:50] HITS file was successfully produced:
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc 144846640 Dec 19 00:54 shared/HITS.pool.root.1
[2025-12-19 00:58:50]  *** Contents of shared directory: ***
[2025-12-19 00:58:50] total 331872
[2025-12-19 00:58:50] -rw-r--r--. 2 boinc boinc 192010162 Dec 18 20:55 ATLAS.root_0
[2025-12-19 00:58:50] -rw-r--r--. 2 boinc boinc     15847 Dec 18 20:55 start_atlas.sh
[2025-12-19 00:58:50] -rw-r--r--. 2 boinc boinc    592396 Dec 18 20:55 input.tar.gz
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc 144846640 Dec 19 00:54 HITS.pool.root.1
[2025-12-19 00:58:50] -rw-------. 1 boinc boinc   2365440 Dec 19 00:58 result.tar.gz
00:58:51 (2382): run_atlas exited; CPU time 53199.930872
00:58:51 (2382): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN