Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:53:21 (3997110): wrapper (7.7.26015): starting
19:53:21 (3997110): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 19:53:21] Arguments: --nthreads 4
[2025-12-18 19:53:21] Threads: 4
[2025-12-18 19:53:21] Checking for CVMFS
[2025-12-18 19:53:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 19:53:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 19:53:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 19:53:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 19:53:21] 2.13.1.0 13397 7303 83340 154161 1 57 8959650 10240000 911 130560 0 9771938 99.948 592303 264 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-18 19:53:21] CVMFS is ok
[2025-12-18 19:53:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 19:53:21] Checking for apptainer binary...
[2025-12-18 19:53:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 19:53:21] Running /usr/bin/apptainer --version
[2025-12-18 19:53:21] apptainer version 1.4.5
[2025-12-18 19:53:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 19:53:21] atlas7l1
[2025-12-18 19:53:21] apptainer works
[2025-12-18 19:53:21] Set ATHENA_PROC_NUMBER=4
[2025-12-18 19:53:21] Set ATHENA_CORE_NUMBER=4
[2025-12-18 19:53:21] Starting ATLAS job with PandaID=6933035673
[2025-12-18 19:53:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 21:28:45]  *** The last 200 lines of the pilot log: ***
[2025-12-18 21:28:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-18 21:28:45]  replicas=None
[2025-12-18 21:28:45]  scope=mc23_13p6TeV
[2025-12-18 21:28:45]  status=None
[2025-12-18 21:28:45]  status_code=0
[2025-12-18 21:28:45]  storage_token=
[2025-12-18 21:28:45]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933035673/log.47886933._013765.job.log.tgz.1
[2025-12-18 21:28:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/89/log.47886933._013765.job.log.tgz.1
[2025-12-18 21:28:45]  workdir=None
[2025-12-18 21:28:45] ]
[2025-12-18 21:28:45] 2025-12-18 20:28:13,375 | INFO     | transferring file log.47886933._013765.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933035673/log.47886933._013765.job.log.tgz.1 to /var/li
[2025-12-18 21:28:45] 2025-12-18 20:28:13,375 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933035673/log.47886933._013765.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-18 21:28:45] 2025-12-18 20:28:13,393 | INFO     | adding to output.list: log.47886933._013765.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/89/log.47886933._013765.job.log.tg
[2025-12-18 21:28:45] 2025-12-18 20:28:13,394 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-18 21:28:45] 2025-12-18 20:28:13,394 | INFO     | summary of transferred files:
[2025-12-18 21:28:45] 2025-12-18 20:28:13,394 | INFO     |  -- lfn=log.47886933._013765.job.log.tgz.1, status_code=0, status=transferred
[2025-12-18 21:28:45] 2025-12-18 20:28:13,394 | INFO     | stage-out finished correctly
[2025-12-18 21:28:45] 2025-12-18 20:28:13,636 | INFO     | PID=4000911 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 21:28:45] 2025-12-18 20:28:13,637 | INFO     | .. there are 2 such processes running
[2025-12-18 21:28:45] 2025-12-18 20:28:14,637 | INFO     | time since job start (5685s) is within the limit (174528.0s)
[2025-12-18 21:28:45] 2025-12-18 20:28:15,951 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-18 21:28:45] 2025-12-18 20:28:16,643 | INFO     | time since job start (5687s) is within the limit (174528.0s)
[2025-12-18 21:28:45] 2025-12-18 20:28:17,037 | INFO     | job 6933035673 has state=finished
[2025-12-18 21:28:45] 2025-12-18 20:28:17,037 | INFO     | preparing for final server update for job 6933035673 in state='finished'
[2025-12-18 21:28:45] 2025-12-18 20:28:17,038 | INFO     | this job has now completed (state=finished)
[2025-12-18 21:28:45] 2025-12-18 20:28:17,038 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-18 21:28:45] 2025-12-18 20:28:17,038 | INFO     | log transfer has been attempted: DONE
[2025-12-18 21:28:45] 2025-12-18 20:28:17,038 | INFO     | job 6933035673 has finished - writing final server update
[2025-12-18 21:28:45] 2025-12-18 20:28:17,039 | INFO     | total number of processed events: 400 (read)
[2025-12-18 21:28:45] 2025-12-18 20:28:17,040 | INFO     | executing command: lscpu
[2025-12-18 21:28:45] 2025-12-18 20:28:17,061 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 21:28:45] 2025-12-18 20:28:18,649 | INFO     | time since job start (5689s) is within the limit (174528.0s)
[2025-12-18 21:28:45] 2025-12-18 20:28:19,525 | WARNING  | process 4007450 can no longer be monitored (due to stat problems) - aborting
[2025-12-18 21:28:45] 2025-12-18 20:28:19,525 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933035673/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 21:28:45] 2025-12-18 20:28:19,606 | INFO     | number of running child processes to parent process 4007450: 1
[2025-12-18 21:28:45] 2025-12-18 20:28:19,606 | INFO     | maximum number of monitored processes: 6
[2025-12-18 21:28:45] 2025-12-18 20:28:20,655 | INFO     | time since job start (5691s) is within the limit (174528.0s)
[2025-12-18 21:28:45] 2025-12-18 20:28:20,832 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-18 21:28:45] 2025-12-18 20:28:20,833 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2025-12-18 21:28:45] 2025-12-18 20:28:20,834 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6933035673/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 21:28:45] 2025-12-18 20:28:20,834 | INFO     | extracted standard info from prmon json
[2025-12-18 21:28:45] 2025-12-18 20:28:20,834 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 21:28:45] 2025-12-18 20:28:20,834 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 21:28:45] 2025-12-18 20:28:20,835 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 21:28:45] 2025-12-18 20:28:20,835 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 21:28:45] 2025-12-18 20:28:20,836 | INFO     | fitting pss+swap vs Time
[2025-12-18 21:28:45] 2025-12-18 20:28:20,836 | INFO     | sum of square deviations: 197203697.5
[2025-12-18 21:28:45] 2025-12-18 20:28:20,836 | INFO     | sum of deviations: -3386907239.5
[2025-12-18 21:28:45] 2025-12-18 20:28:20,836 | INFO     | mean x: 1766086927.5
[2025-12-18 21:28:45] 2025-12-18 20:28:20,836 | INFO     | mean y: 2336440.8720930233
[2025-12-18 21:28:45] 2025-12-18 20:28:20,836 | INFO     | intersect: 30334285974.1006
[2025-12-18 21:28:45] 2025-12-18 20:28:20,836 | INFO     | chi2: 0.0924333368385201
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | current memory leak: -17.17 B/s (using 86 data points, chi2=0.09)
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | could have reported an average CPU frequency of 2400 MHz (7 samples)
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | ..............................
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | . Timing measurements:
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | . get job = 0 s
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | . initial setup = 1 s
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | . payload setup = 3 s
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | . stage-in = 0 s
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | . payload execution = 5662 s
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | . stage-out = 0 s
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | . log creation = 0 s
[2025-12-18 21:28:45] 2025-12-18 20:28:20,837 | INFO     | ..............................
[2025-12-18 21:28:45] 2025-12-18 20:28:20,884 | INFO     | 
[2025-12-18 21:28:45] 2025-12-18 20:28:20,884 | INFO     | job summary report
[2025-12-18 21:28:45] 2025-12-18 20:28:20,884 | INFO     | --------------------------------------------------
[2025-12-18 21:28:45] 2025-12-18 20:28:20,884 | INFO     | PanDA job id: 6933035673
[2025-12-18 21:28:45] 2025-12-18 20:28:20,884 | INFO     | task id: 47886933
[2025-12-18 21:28:45] 2025-12-18 20:28:20,884 | INFO     | errors: (none)
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | pilot state: finished 
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | transexitcode: 0
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | exeerrorcode: 0
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | exeerrordiag: 
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | exitcode: 0
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | exitmsg: OK
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | cpuconsumptiontime: 21590 s
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | nevents: 400
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | neventsw: 0
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | pid: 4007450
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | pgrp: 4007450
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | corecount: 4
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | event service: False
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | sizes: {0: 2283929, 3: 2284191, 11: 2284219, 5669: 2310956, 5670: 2319982, 5672: 2320038, 5677: 2320360}
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | --------------------------------------------------
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | 
[2025-12-18 21:28:45] 2025-12-18 20:28:20,885 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2025-12-18 21:28:45] 2025-12-18 20:28:20,901 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,901 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,901 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | job 6933035673 has completed (purged errors)
[2025-12-18 21:28:45] 2025-12-18 20:28:20,902 | INFO     | overall cleanup function is called
[2025-12-18 21:28:45] 2025-12-18 20:28:21,909 | INFO     | --- collectZombieJob: --- 10, [4007450]
[2025-12-18 21:28:45] 2025-12-18 20:28:21,909 | INFO     | zombie collector waiting for pid 4007450
[2025-12-18 21:28:45] 2025-12-18 20:28:21,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 21:28:45] 2025-12-18 20:28:21,909 | INFO     | collected zombie processes
[2025-12-18 21:28:45] 2025-12-18 20:28:21,909 | INFO     | will attempt to kill all subprocesses of pid=4007450
[2025-12-18 21:28:45] 2025-12-18 20:28:21,990 | INFO     | process IDs to be killed: [4007450] (in reverse order)
[2025-12-18 21:28:45] 2025-12-18 20:28:22,018 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 21:28:45] 2025-12-18 20:28:22,018 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 21:28:45] 2025-12-18 20:28:22,021 | INFO     | did not find any defunct processes belonging to 4007450
[2025-12-18 21:28:45] 2025-12-18 20:28:22,022 | INFO     | did not find any defunct processes belonging to 4007450
[2025-12-18 21:28:45] 2025-12-18 20:28:22,023 | INFO     | ready for new job
[2025-12-18 21:28:45] 2025-12-18 20:28:22,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 21:28:45] 2025-12-18 20:28:22,024 | INFO     | ***************************************
[2025-12-18 21:28:45] 2025-12-18 20:28:22,024 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 21:28:45] 2025-12-18 20:28:22,024 | INFO     | ***************************************
[2025-12-18 21:28:45] 2025-12-18 20:28:22,024 | INFO     | 
[2025-12-18 21:28:45] 2025-12-18 20:28:22,024 | INFO     | pilot is running in a VM
[2025-12-18 21:28:45] 2025-12-18 20:28:22,024 | INFO     | architecture information:
[2025-12-18 21:28:45] 2025-12-18 20:28:22,024 | INFO     | executing command: cat /etc/os-release
[2025-12-18 21:28:45] 2025-12-18 20:28:22,037 | INFO     | cat /etc/os-release:
[2025-12-18 21:28:45] NAME="CentOS Linux"
[2025-12-18 21:28:45] VERSION="7 (Core)"
[2025-12-18 21:28:45] ID="centos"
[2025-12-18 21:28:45] ID_LIKE="rhel fedora"
[2025-12-18 21:28:45] VERSION_ID="7"
[2025-12-18 21:28:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 21:28:45] ANSI_COLOR="0;31"
[2025-12-18 21:28:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 21:28:45] HOME_URL="https://www.centos.org/"
[2025-12-18 21:28:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 21:28:45] 
[2025-12-18 21:28:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 21:28:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 21:28:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 21:28:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 21:28:45] 
[2025-12-18 21:28:45] 2025-12-18 20:28:22,038 | INFO     | ***************************************
[2025-12-18 21:28:45] 2025-12-18 20:28:22,541 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-12-18 21:28:45] 2025-12-18 20:28:22,554 | INFO     | sufficient remaining disk space (150690856960 B)
[2025-12-18 21:28:45] 2025-12-18 20:28:22,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 21:28:45] 2025-12-18 20:28:22,554 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 21:28:45] 2025-12-18 20:28:22,554 | INFO     | update_server=False
[2025-12-18 21:28:45] 2025-12-18 20:28:22,554 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 21:28:45] 2025-12-18 20:28:22,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 21:28:45] 2025-12-18 20:28:22,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 21:28:45] 2025-12-18 20:28:22,555 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-18 21:28:45] 2025-12-18 20:28:22,556 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 21:28:45] 2025-12-18 20:28:22,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 21:28:45] 2025-12-18 20:28:22,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 21:28:45] 2025-12-18 20:28:22,587 | INFO     | all data control threads have been joined
[2025-12-18 21:28:45] 2025-12-18 20:28:23,065 | INFO     | all job control threads have been joined
[2025-12-18 21:28:45] 2025-12-18 20:28:23,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 21:28:45] 2025-12-18 20:28:23,111 | INFO     | aborting loop
[2025-12-18 21:28:45] 2025-12-18 20:28:23,560 | INFO     | [job] retrieve thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:23,561 | INFO     | [job] queue monitor thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:23,570 | INFO     | all payload control threads have been joined
[2025-12-18 21:28:45] 2025-12-18 20:28:23,571 | INFO     | [payload] validate_post thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:23,592 | INFO     | [data] control thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:23,763 | INFO     | [payload] failed_post thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:23,879 | INFO     | [job] validate thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:23,879 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:23,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 21:28:45] 2025-12-18 20:28:24,067 | INFO     | [job] control thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:24,116 | INFO     | [job] job monitor thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:24,135 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:24,336 | INFO     | [data] copytool_in thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:24,572 | INFO     | [payload] control thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:25,004 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:25,969 | INFO     | [data] copytool_out thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:26,561 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:32,969 | INFO     | job.realtimelogging is not enabled
[2025-12-18 21:28:45] 2025-12-18 20:28:33,975 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 21:28:45] 2025-12-18 20:28:38,136 | INFO     | [monitor] cgroup control has ended
[2025-12-18 21:28:45] 2025-12-18 20:28:39,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130343561594688)>', '<ExcThread(monitor, started 130342795081472)>']
[2025-12-18 21:28:45] 2025-12-18 20:28:40,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 21:28:45] 2025-12-18 20:28:40,648 | INFO     | [monitor] control thread has ended
[2025-12-18 21:28:45] 2025-12-18 20:28:44,976 | INFO     | all workflow threads have been joined
[2025-12-18 21:28:45] 2025-12-18 20:28:44,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 21:28:45] 2025-12-18 20:28:44,977 | INFO     | traces error code: 0
[2025-12-18 21:28:45] 2025-12-18 20:28:44,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 21:28:45] 2025-12-18 20:28:45,039 [wrapper] ==== pilot stdout END ====
[2025-12-18 21:28:45] 2025-12-18 20:28:45,044 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 21:28:45] 2025-12-18 20:28:45,047 [wrapper] pilotpid: 4000911
[2025-12-18 21:28:45] 2025-12-18 20:28:45,052 [wrapper] Pilot exit status: 0
[2025-12-18 21:28:45] 2025-12-18 20:28:45,063 [wrapper] pandaids: 6933035673
[2025-12-18 21:28:45] 2025-12-18 20:28:45,086 [wrapper] cleanup supervisor_pilot 4049068 4000912
[2025-12-18 21:28:45] 2025-12-18 20:28:45,092 [wrapper] Test setup, not cleaning
[2025-12-18 21:28:45] 2025-12-18 20:28:45,096 [wrapper] apfmon messages muted
[2025-12-18 21:28:45] 2025-12-18 20:28:45,100 [wrapper] ==== wrapper stdout END ====
[2025-12-18 21:28:45] 2025-12-18 20:28:45,103 [wrapper] ==== wrapper stderr END ====
[2025-12-18 21:28:45]  *** Error codes and diagnostics ***
[2025-12-18 21:28:45]     "exeErrorCode": 0,
[2025-12-18 21:28:45]     "exeErrorDiag": "",
[2025-12-18 21:28:45]     "pilotErrorCode": 0,
[2025-12-18 21:28:45]     "pilotErrorDiag": "",
[2025-12-18 21:28:45]  *** Listing of results directory ***
[2025-12-18 21:28:45] insgesamt 335400
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc    579449 Dez 18 04:11 pilot3.tar.gz
[2025-12-18 21:28:45] -rwx------ 1 yeti boinc     36322 Dez 18 04:11 runpilot2-wrapper.sh
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc      5112 Dez 18 04:11 queuedata.json
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc       100 Dez 18 19:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 21:28:45] -rwxr-xr-x 1 yeti boinc      7986 Dez 18 19:53 run_atlas
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc       105 Dez 18 19:53 job.xml
[2025-12-18 21:28:45] -rw-r--r-- 2 yeti boinc     15847 Dez 18 19:53 start_atlas.sh
[2025-12-18 21:28:45] drwxrwx--x 2 yeti boinc      4096 Dez 18 19:53 shared
[2025-12-18 21:28:45] -rw-r--r-- 2 yeti boinc    592399 Dez 18 19:53 input.tar.gz
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc      6616 Dez 18 19:53 init_data.xml
[2025-12-18 21:28:45] -rw-r--r-- 2 yeti boinc 190131967 Dez 18 19:53 EVNT.47886929._000222.pool.root.1
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc         0 Dez 18 19:53 boinc_setup_complete
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc         0 Dez 18 19:53 boinc_lockfile
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc      2513 Dez 18 19:53 pandaJob.out
[2025-12-18 21:28:45] -rw------- 1 yeti boinc        52 Dez 18 19:53 setup.sh.local
[2025-12-18 21:28:45] -rw------- 1 yeti boinc    988872 Dez 18 19:53 agis_schedconf.cvmfs.json
[2025-12-18 21:28:45] -rw------- 1 yeti boinc   1516240 Dez 18 19:53 agis_ddmendpoints.agis.ALL.json
[2025-12-18 21:28:45] drwx------ 5 yeti boinc      4096 Dez 18 19:53 pilot3
[2025-12-18 21:28:45] -rw------- 1 yeti boinc 147125557 Dez 18 21:27 HITS.47886933._013765.pool.root.1
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc       529 Dez 18 21:27 boinc_task_state.xml
[2025-12-18 21:28:45] -rw------- 1 yeti boinc      1024 Dez 18 21:28 memory_monitor_summary.json
[2025-12-18 21:28:45] -rw------- 1 yeti boinc        95 Dez 18 21:28 pilot_heartbeat.json
[2025-12-18 21:28:45] -rw------- 1 yeti boinc    288690 Dez 18 21:28 log.47886933._013765.job.log.tgz.1
[2025-12-18 21:28:45] -rw------- 1 yeti boinc      7766 Dez 18 21:28 heartbeat.json
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc      8192 Dez 18 21:28 boinc_mmap_file
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc        27 Dez 18 21:28 wrapper_checkpoint.txt
[2025-12-18 21:28:45] -rw------- 1 yeti boinc      4701 Dez 18 21:28 pilotlog.txt
[2025-12-18 21:28:45] -rw------- 1 yeti boinc    850984 Dez 18 21:28 log.47886933._013765.job.log.1
[2025-12-18 21:28:45] -rw------- 1 yeti boinc       357 Dez 18 21:28 output.list
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc       620 Dez 18 21:28 runtime_log
[2025-12-18 21:28:45] -rw------- 1 yeti boinc   1157120 Dez 18 21:28 result.tar.gz
[2025-12-18 21:28:45] -rw------- 1 yeti boinc       638 Dez 18 21:28 YbYNDmmbJq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVXYKDmltQ9So.diag
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc      9545 Dez 18 21:28 runtime_log.err
[2025-12-18 21:28:45] -rw-r--r-- 1 yeti boinc     21627 Dez 18 21:28 stderr.txt
[2025-12-18 21:28:45] HITS file was successfully produced:
[2025-12-18 21:28:45] -rw------- 1 yeti boinc 147125557 Dez 18 21:27 shared/HITS.pool.root.1
[2025-12-18 21:28:45]  *** Contents of shared directory: ***
[2025-12-18 21:28:45] insgesamt 331088
[2025-12-18 21:28:45] -rw-r--r-- 2 yeti boinc     15847 Dez 18 19:53 start_atlas.sh
[2025-12-18 21:28:45] -rw-r--r-- 2 yeti boinc    592399 Dez 18 19:53 input.tar.gz
[2025-12-18 21:28:45] -rw-r--r-- 2 yeti boinc 190131967 Dez 18 19:53 ATLAS.root_0
[2025-12-18 21:28:45] -rw------- 1 yeti boinc 147125557 Dez 18 21:27 HITS.pool.root.1
[2025-12-18 21:28:45] -rw------- 1 yeti boinc   1157120 Dez 18 21:28 result.tar.gz
21:28:46 (3997110): run_atlas exited; CPU time 21659.971759
21:28:46 (3997110): called boinc_finish(0)

</stderr_txt>
]]>

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