Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:45:51 (3963021): wrapper (7.7.26015): starting
18:45:51 (3963021): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 18:45:51] Arguments: --nthreads 4
[2025-12-18 18:45:51] Threads: 4
[2025-12-18 18:45:51] Checking for CVMFS
[2025-12-18 18:45:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 18:45:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 18:45:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 18:45:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 18:45:51] 2.13.1.0 13397 7235 82736 154160 0 57 8931834 10240000 911 130560 0 9689502 99.948 590957 264 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-18 18:45:51] CVMFS is ok
[2025-12-18 18:45:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 18:45:51] Checking for apptainer binary...
[2025-12-18 18:45:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 18:45:51] Running /usr/bin/apptainer --version
[2025-12-18 18:45:51] apptainer version 1.4.5
[2025-12-18 18:45:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 18:45:51] atlas7l1
[2025-12-18 18:45:51] apptainer works
[2025-12-18 18:45:51] Set ATHENA_PROC_NUMBER=4
[2025-12-18 18:45:51] Set ATHENA_CORE_NUMBER=4
[2025-12-18 18:45:52] Starting ATLAS job with PandaID=6932714760
[2025-12-18 18:45:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 20:18:13]  *** The last 200 lines of the pilot log: ***
[2025-12-18 20:18:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-18 20:18:13]  replicas=None
[2025-12-18 20:18:13]  scope=mc23_13p6TeV
[2025-12-18 20:18:13]  status=None
[2025-12-18 20:18:13]  status_code=0
[2025-12-18 20:18:13]  storage_token=
[2025-12-18 20:18:13]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6932714760/log.47886933._013032.job.log.tgz.1
[2025-12-18 20:18:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/85/log.47886933._013032.job.log.tgz.1
[2025-12-18 20:18:13]  workdir=None
[2025-12-18 20:18:13] ]
[2025-12-18 20:18:13] 2025-12-18 19:17:25,732 | INFO     | transferring file log.47886933._013032.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6932714760/log.47886933._013032.job.log.tgz.1 to /var/li
[2025-12-18 20:18:13] 2025-12-18 19:17:25,732 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6932714760/log.47886933._013032.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-18 20:18:13] 2025-12-18 19:17:25,753 | INFO     | adding to output.list: log.47886933._013032.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/85/log.47886933._013032.job.log.tg
[2025-12-18 20:18:13] 2025-12-18 19:17:25,754 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-18 20:18:13] 2025-12-18 19:17:25,754 | INFO     | summary of transferred files:
[2025-12-18 20:18:13] 2025-12-18 19:17:25,754 | INFO     |  -- lfn=log.47886933._013032.job.log.tgz.1, status_code=0, status=transferred
[2025-12-18 20:18:13] 2025-12-18 19:17:25,755 | INFO     | stage-out finished correctly
[2025-12-18 20:18:13] 2025-12-18 19:17:25,805 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-18 20:18:13] 2025-12-18 19:17:27,387 | INFO     | time since job start (5488s) is within the limit (174528.0s)
[2025-12-18 20:18:13] 2025-12-18 19:17:28,306 | INFO     | job 6932714760 has state=finished
[2025-12-18 20:18:13] 2025-12-18 19:17:28,307 | INFO     | preparing for final server update for job 6932714760 in state='finished'
[2025-12-18 20:18:13] 2025-12-18 19:17:28,307 | INFO     | this job has now completed (state=finished)
[2025-12-18 20:18:13] 2025-12-18 19:17:28,307 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-18 20:18:13] 2025-12-18 19:17:28,308 | INFO     | log transfer has been attempted: DONE
[2025-12-18 20:18:13] 2025-12-18 19:17:28,308 | INFO     | job 6932714760 has finished - writing final server update
[2025-12-18 20:18:13] 2025-12-18 19:17:28,308 | INFO     | total number of processed events: 400 (read)
[2025-12-18 20:18:13] 2025-12-18 19:17:28,310 | INFO     | executing command: lscpu
[2025-12-18 20:18:13] 2025-12-18 19:17:28,323 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 20:18:13] 2025-12-18 19:17:28,556 | WARNING  | process 3973377 can no longer be monitored (due to stat problems) - aborting
[2025-12-18 20:18:13] 2025-12-18 19:17:28,556 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6932714760/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 20:18:13] 2025-12-18 19:17:28,636 | INFO     | number of running child processes to parent process 3973377: 1
[2025-12-18 20:18:13] 2025-12-18 19:17:28,636 | INFO     | maximum number of monitored processes: 6
[2025-12-18 20:18:13] 2025-12-18 19:17:29,392 | INFO     | time since job start (5490s) is within the limit (174528.0s)
[2025-12-18 20:18:13] 2025-12-18 19:17:31,139 | INFO     | monitor loop #418: job 0:6932714760 is in state 'finished'
[2025-12-18 20:18:13] 2025-12-18 19:17:31,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 20:18:13] 2025-12-18 19:17:31,398 | INFO     | time since job start (5492s) is within the limit (174528.0s)
[2025-12-18 20:18:13] 2025-12-18 19:17:32,042 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-18 20:18:13] 2025-12-18 19:17:32,044 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2025-12-18 20:18:13] 2025-12-18 19:17:32,048 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6932714760/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 20:18:13] 2025-12-18 19:17:32,049 | INFO     | extracted standard info from prmon json
[2025-12-18 20:18:13] 2025-12-18 19:17:32,049 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 20:18:13] 2025-12-18 19:17:32,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 20:18:13] 2025-12-18 19:17:32,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 20:18:13] 2025-12-18 19:17:32,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 20:18:13] 2025-12-18 19:17:32,051 | INFO     | fitting pss+swap vs Time
[2025-12-18 20:18:13] 2025-12-18 19:17:32,051 | INFO     | sum of square deviations: 177275882.0
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | sum of deviations: -16994067470.0
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | mean x: 1766082786.0
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | mean y: 2425808.3855421687
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | intersect: 169303120772.01047
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | chi2: 0.19288522698072896
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | current memory leak: -95.86 B/s (using 83 data points, chi2=0.19)
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | could have reported an average CPU frequency of 2400 MHz (7 samples)
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | ..............................
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | . Timing measurements:
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | . get job = 0 s
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | . initial setup = 1 s
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | . payload setup = 3 s
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | . stage-in = 0 s
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | . payload execution = 5463 s
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | . stage-out = 0 s
[2025-12-18 20:18:13] 2025-12-18 19:17:32,052 | INFO     | . log creation = 0 s
[2025-12-18 20:18:13] 2025-12-18 19:17:32,053 | INFO     | ..............................
[2025-12-18 20:18:13] 2025-12-18 19:17:32,397 | INFO     | 
[2025-12-18 20:18:13] 2025-12-18 19:17:32,398 | INFO     | job summary report
[2025-12-18 20:18:13] 2025-12-18 19:17:32,398 | INFO     | --------------------------------------------------
[2025-12-18 20:18:13] 2025-12-18 19:17:32,398 | INFO     | PanDA job id: 6932714760
[2025-12-18 20:18:13] 2025-12-18 19:17:32,398 | INFO     | task id: 47886933
[2025-12-18 20:18:13] 2025-12-18 19:17:32,399 | INFO     | errors: (none)
[2025-12-18 20:18:13] 2025-12-18 19:17:32,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 20:18:13] 2025-12-18 19:17:32,399 | INFO     | pilot state: finished 
[2025-12-18 20:18:13] 2025-12-18 19:17:32,399 | INFO     | transexitcode: 0
[2025-12-18 20:18:13] 2025-12-18 19:17:32,400 | INFO     | exeerrorcode: 0
[2025-12-18 20:18:13] 2025-12-18 19:17:32,400 | INFO     | exeerrordiag: 
[2025-12-18 20:18:13] 2025-12-18 19:17:32,400 | INFO     | exitcode: 0
[2025-12-18 20:18:13] 2025-12-18 19:17:32,400 | INFO     | exitmsg: OK
[2025-12-18 20:18:13] 2025-12-18 19:17:32,400 | INFO     | cpuconsumptiontime: 20776 s
[2025-12-18 20:18:13] 2025-12-18 19:17:32,400 | INFO     | nevents: 400
[2025-12-18 20:18:13] 2025-12-18 19:17:32,401 | INFO     | neventsw: 0
[2025-12-18 20:18:13] 2025-12-18 19:17:32,401 | INFO     | pid: 3973377
[2025-12-18 20:18:13] 2025-12-18 19:17:32,401 | INFO     | pgrp: 3973377
[2025-12-18 20:18:13] 2025-12-18 19:17:32,401 | INFO     | corecount: 4
[2025-12-18 20:18:13] 2025-12-18 19:17:32,401 | INFO     | event service: False
[2025-12-18 20:18:13] 2025-12-18 19:17:32,401 | INFO     | sizes: {0: 2283983, 2: 2284245, 11: 2284273, 5470: 2310956, 5472: 2320038, 5478: 2320176}
[2025-12-18 20:18:13] 2025-12-18 19:17:32,401 | INFO     | --------------------------------------------------
[2025-12-18 20:18:13] 2025-12-18 19:17:32,401 | INFO     | 
[2025-12-18 20:18:13] 2025-12-18 19:17:32,402 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-12-18 20:18:13] 2025-12-18 19:17:32,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 20:18:13] 2025-12-18 19:17:32,419 | INFO     | job 6932714760 has completed (purged errors)
[2025-12-18 20:18:13] 2025-12-18 19:17:32,419 | INFO     | overall cleanup function is called
[2025-12-18 20:18:13] 2025-12-18 19:17:33,425 | INFO     | --- collectZombieJob: --- 10, [3973377]
[2025-12-18 20:18:13] 2025-12-18 19:17:33,426 | INFO     | zombie collector waiting for pid 3973377
[2025-12-18 20:18:13] 2025-12-18 19:17:33,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 20:18:13] 2025-12-18 19:17:33,426 | INFO     | collected zombie processes
[2025-12-18 20:18:13] 2025-12-18 19:17:33,426 | INFO     | will attempt to kill all subprocesses of pid=3973377
[2025-12-18 20:18:13] 2025-12-18 19:17:33,510 | INFO     | process IDs to be killed: [3973377] (in reverse order)
[2025-12-18 20:18:13] 2025-12-18 19:17:33,540 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 20:18:13] 2025-12-18 19:17:33,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 20:18:13] 2025-12-18 19:17:33,546 | INFO     | did not find any defunct processes belonging to 3973377
[2025-12-18 20:18:13] 2025-12-18 19:17:33,550 | INFO     | did not find any defunct processes belonging to 3973377
[2025-12-18 20:18:13] 2025-12-18 19:17:33,551 | INFO     | ready for new job
[2025-12-18 20:18:13] 2025-12-18 19:17:33,551 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 20:18:13] 2025-12-18 19:17:33,552 | INFO     | ***************************************
[2025-12-18 20:18:13] 2025-12-18 19:17:33,552 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 20:18:13] 2025-12-18 19:17:33,552 | INFO     | ***************************************
[2025-12-18 20:18:13] 2025-12-18 19:17:33,552 | INFO     | 
[2025-12-18 20:18:13] 2025-12-18 19:17:33,552 | INFO     | pilot is running in a VM
[2025-12-18 20:18:13] 2025-12-18 19:17:33,552 | INFO     | architecture information:
[2025-12-18 20:18:13] 2025-12-18 19:17:33,552 | INFO     | executing command: cat /etc/os-release
[2025-12-18 20:18:13] 2025-12-18 19:17:33,560 | INFO     | cat /etc/os-release:
[2025-12-18 20:18:13] NAME="CentOS Linux"
[2025-12-18 20:18:13] VERSION="7 (Core)"
[2025-12-18 20:18:13] ID="centos"
[2025-12-18 20:18:13] ID_LIKE="rhel fedora"
[2025-12-18 20:18:13] VERSION_ID="7"
[2025-12-18 20:18:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 20:18:13] ANSI_COLOR="0;31"
[2025-12-18 20:18:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 20:18:13] HOME_URL="https://www.centos.org/"
[2025-12-18 20:18:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 20:18:13] 
[2025-12-18 20:18:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 20:18:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 20:18:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 20:18:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 20:18:13] 
[2025-12-18 20:18:13] 2025-12-18 19:17:33,560 | INFO     | ***************************************
[2025-12-18 20:18:13] 2025-12-18 19:17:34,063 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-12-18 20:18:13] 2025-12-18 19:17:34,075 | INFO     | sufficient remaining disk space (150855483392 B)
[2025-12-18 20:18:13] 2025-12-18 19:17:34,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 20:18:13] 2025-12-18 19:17:34,076 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 20:18:13] 2025-12-18 19:17:34,076 | INFO     | update_server=False
[2025-12-18 20:18:13] 2025-12-18 19:17:34,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 20:18:13] 2025-12-18 19:17:34,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 20:18:13] 2025-12-18 19:17:34,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 20:18:13] 2025-12-18 19:17:34,405 | INFO     | all job control threads have been joined
[2025-12-18 20:18:13] 2025-12-18 19:17:34,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 20:18:13] 2025-12-18 19:17:34,648 | INFO     | aborting loop
[2025-12-18 20:18:13] 2025-12-18 19:17:34,719 | INFO     | all payload control threads have been joined
[2025-12-18 20:18:13] 2025-12-18 19:17:35,050 | INFO     | all data control threads have been joined
[2025-12-18 20:18:13] 2025-12-18 19:17:35,081 | INFO     | [job] retrieve thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:35,082 | INFO     | [job] queue monitor thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:35,406 | INFO     | [job] control thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:35,427 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:35,653 | INFO     | [job] job monitor thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:35,724 | INFO     | [payload] control thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:35,861 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:36,053 | INFO     | [data] control thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:36,082 | INFO     | [data] copytool_out thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:36,180 | INFO     | [payload] validate_post thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:36,282 | INFO     | [payload] failed_post thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:36,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 20:18:13] 2025-12-18 19:17:36,410 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:36,410 | INFO     | [job] validate thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:36,411 | INFO     | [data] copytool_in thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:40,362 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:17:44,905 | INFO     | job.realtimelogging is not enabled
[2025-12-18 20:18:13] 2025-12-18 19:17:45,907 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 20:18:13] 2025-12-18 19:18:04,594 | INFO     | PID=3966825 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 20:18:13] 2025-12-18 19:18:04,594 | INFO     | .. there are 2 such processes running
[2025-12-18 20:18:13] 2025-12-18 19:18:04,595 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 20:18:13] 2025-12-18 19:18:04,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 20:18:13] 2025-12-18 19:18:04,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 20:18:13] 2025-12-18 19:18:07,099 | INFO     | [monitor] cgroup control has ended
[2025-12-18 20:18:13] 2025-12-18 19:18:07,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130333607204672)>', '<ExcThread(monitor, started 130332988794624)>']
[2025-12-18 20:18:13] 2025-12-18 19:18:08,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 20:18:13] 2025-12-18 19:18:08,616 | INFO     | [monitor] control thread has ended
[2025-12-18 20:18:13] 2025-12-18 19:18:12,967 | INFO     | all workflow threads have been joined
[2025-12-18 20:18:13] 2025-12-18 19:18:12,968 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 20:18:13] 2025-12-18 19:18:12,968 | INFO     | traces error code: 0
[2025-12-18 20:18:13] 2025-12-18 19:18:12,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 20:18:13] 2025-12-18 19:18:13,038 [wrapper] ==== pilot stdout END ====
[2025-12-18 20:18:13] 2025-12-18 19:18:13,041 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 20:18:13] 2025-12-18 19:18:13,044 [wrapper] pilotpid: 3966825
[2025-12-18 20:18:13] 2025-12-18 19:18:13,049 [wrapper] Pilot exit status: 0
[2025-12-18 20:18:13] 2025-12-18 19:18:13,061 [wrapper] pandaids: 6932714760
[2025-12-18 20:18:13] 2025-12-18 19:18:13,090 [wrapper] cleanup supervisor_pilot 4015275 3966826
[2025-12-18 20:18:13] 2025-12-18 19:18:13,095 [wrapper] Test setup, not cleaning
[2025-12-18 20:18:13] 2025-12-18 19:18:13,100 [wrapper] apfmon messages muted
[2025-12-18 20:18:13] 2025-12-18 19:18:13,104 [wrapper] ==== wrapper stdout END ====
[2025-12-18 20:18:13] 2025-12-18 19:18:13,109 [wrapper] ==== wrapper stderr END ====
[2025-12-18 20:18:13]  *** Error codes and diagnostics ***
[2025-12-18 20:18:13]     "exeErrorCode": 0,
[2025-12-18 20:18:13]     "exeErrorDiag": "",
[2025-12-18 20:18:13]     "pilotErrorCode": 0,
[2025-12-18 20:18:13]     "pilotErrorDiag": "",
[2025-12-18 20:18:13]  *** Listing of results directory ***
[2025-12-18 20:18:13] insgesamt 335776
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc    579449 Dez 18 01:45 pilot3.tar.gz
[2025-12-18 20:18:13] -rwx------ 1 yeti boinc     36322 Dez 18 01:48 runpilot2-wrapper.sh
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc      5112 Dez 18 01:49 queuedata.json
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc       100 Dez 18 18:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 20:18:13] -rwxr-xr-x 1 yeti boinc      7986 Dez 18 18:45 run_atlas
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc       105 Dez 18 18:45 job.xml
[2025-12-18 20:18:13] -rw-r--r-- 2 yeti boinc     15847 Dez 18 18:45 start_atlas.sh
[2025-12-18 20:18:13] drwxrwx--x 2 yeti boinc      4096 Dez 18 18:45 shared
[2025-12-18 20:18:13] -rw-r--r-- 2 yeti boinc    592401 Dez 18 18:45 input.tar.gz
[2025-12-18 20:18:13] -rw-r--r-- 2 yeti boinc 190640788 Dez 18 18:45 EVNT.47886929._000538.pool.root.1
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc         0 Dez 18 18:45 boinc_setup_complete
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc      6616 Dez 18 18:45 init_data.xml
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc         0 Dez 18 18:45 boinc_lockfile
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc      2515 Dez 18 18:45 pandaJob.out
[2025-12-18 20:18:13] -rw------- 1 yeti boinc        52 Dez 18 18:45 setup.sh.local
[2025-12-18 20:18:13] -rw------- 1 yeti boinc    988125 Dez 18 18:45 agis_schedconf.cvmfs.json
[2025-12-18 20:18:13] -rw------- 1 yeti boinc   1516240 Dez 18 18:45 agis_ddmendpoints.agis.ALL.json
[2025-12-18 20:18:13] drwx------ 5 yeti boinc      4096 Dez 18 18:45 pilot3
[2025-12-18 20:18:13] -rw------- 1 yeti boinc 147041900 Dez 18 20:17 HITS.47886933._013032.pool.root.1
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc       529 Dez 18 20:17 boinc_task_state.xml
[2025-12-18 20:18:13] -rw------- 1 yeti boinc      1024 Dez 18 20:17 memory_monitor_summary.json
[2025-12-18 20:18:13] -rw------- 1 yeti boinc    292411 Dez 18 20:17 log.47886933._013032.job.log.tgz.1
[2025-12-18 20:18:13] -rw------- 1 yeti boinc      7776 Dez 18 20:17 heartbeat.json
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc        27 Dez 18 20:17 wrapper_checkpoint.txt
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc      8192 Dez 18 20:17 boinc_mmap_file
[2025-12-18 20:18:13] -rw------- 1 yeti boinc        95 Dez 18 20:18 pilot_heartbeat.json
[2025-12-18 20:18:13] -rw------- 1 yeti boinc      4972 Dez 18 20:18 pilotlog.txt
[2025-12-18 20:18:13] -rw------- 1 yeti boinc    824372 Dez 18 20:18 log.47886933._013032.job.log.1
[2025-12-18 20:18:13] -rw------- 1 yeti boinc       357 Dez 18 20:18 output.list
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc       620 Dez 18 20:18 runtime_log
[2025-12-18 20:18:13] -rw------- 1 yeti boinc   1136640 Dez 18 20:18 result.tar.gz
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc      9545 Dez 18 20:18 runtime_log.err
[2025-12-18 20:18:13] -rw------- 1 yeti boinc       638 Dez 18 20:18 65hNDmuMHq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcAdKDm5d62Pm.diag
[2025-12-18 20:18:13] -rw-r--r-- 1 yeti boinc     21608 Dez 18 20:18 stderr.txt
[2025-12-18 20:18:13] HITS file was successfully produced:
[2025-12-18 20:18:13] -rw------- 1 yeti boinc 147041900 Dez 18 20:17 shared/HITS.pool.root.1
[2025-12-18 20:18:13]  *** Contents of shared directory: ***
[2025-12-18 20:18:13] insgesamt 331484
[2025-12-18 20:18:13] -rw-r--r-- 2 yeti boinc     15847 Dez 18 18:45 start_atlas.sh
[2025-12-18 20:18:13] -rw-r--r-- 2 yeti boinc    592401 Dez 18 18:45 input.tar.gz
[2025-12-18 20:18:13] -rw-r--r-- 2 yeti boinc 190640788 Dez 18 18:45 ATLAS.root_0
[2025-12-18 20:18:13] -rw------- 1 yeti boinc 147041900 Dez 18 20:17 HITS.pool.root.1
[2025-12-18 20:18:13] -rw------- 1 yeti boinc   1136640 Dez 18 20:18 result.tar.gz
20:18:14 (3963021): run_atlas exited; CPU time 20840.405858
20:18:14 (3963021): called boinc_finish(0)

</stderr_txt>
]]>

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