Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:24:30 (1313015): wrapper (7.7.26015): starting
00:24:30 (1313015): wrapper: running run_atlas (--nthreads 3)
[2025-12-19 00:24:30] Arguments: --nthreads 3
[2025-12-19 00:24:30] Threads: 3
[2025-12-19 00:24:30] Checking for CVMFS
[2025-12-19 00:24:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-19 00:24:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-19 00:24:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-19 00:24:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-19 00:24:31] 2.13.3.0 1229690 379 57008 154155 2 57 28478354 31457280 0 130560 0 259304 99.983 19239 18 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-12-19 00:24:31] CVMFS is ok
[2025-12-19 00:24:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-19 00:24:31] Checking for apptainer binary...
[2025-12-19 00:24:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-19 00:24:31] Running /usr/bin/apptainer --version
[2025-12-19 00:24:31] apptainer version 1.4.4-1.el9
[2025-12-19 00:24:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-19 00:24:31] testio001
[2025-12-19 00:24:31] apptainer works
[2025-12-19 00:24:31] Set ATHENA_PROC_NUMBER=3
[2025-12-19 00:24:31] Set ATHENA_CORE_NUMBER=3
[2025-12-19 00:24:31] Starting ATLAS job with PandaID=6932713596
[2025-12-19 00:24:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 03:19:22]  *** The last 200 lines of the pilot log: ***
[2025-12-19 03:19:22] 2025-12-18 18:18:40,155 | INFO     | time since job start (10422s) is within the limit (174528.0s)
[2025-12-19 03:19:22] 2025-12-18 18:18:41,077 | INFO     | monitor loop #774: job 0:6932713596 is in state 'finished'
[2025-12-19 03:19:22] 2025-12-18 18:18:41,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 03:19:22] 2025-12-18 18:18:42,160 | INFO     | time since job start (10424s) is within the limit (174528.0s)
[2025-12-19 03:19:22] 2025-12-18 18:18:43,580 | INFO     | monitor loop #775: job 0:6932713596 is in state 'finished'
[2025-12-19 03:19:22] 2025-12-18 18:18:43,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,145 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-19 03:19:22] 2025-12-18 18:18:44,146 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3645.9184999999998
[2025-12-19 03:19:22] 2025-12-18 18:18:44,147 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6932713596/memory_monitor_summary.json (trf name=prmon)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,147 | INFO     | extracted standard info from prmon json
[2025-12-19 03:19:22] 2025-12-18 18:18:44,147 | INFO     | extracted standard memory fields from prmon json
[2025-12-19 03:19:22] 2025-12-18 18:18:44,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-19 03:19:22] 2025-12-18 18:18:44,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-19 03:19:22] 2025-12-18 18:18:44,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-19 03:19:22] 2025-12-18 18:18:44,149 | INFO     | fitting pss+swap vs Time
[2025-12-19 03:19:22] 2025-12-18 18:18:44,149 | INFO     | sum of square deviations: 1523386702.5
[2025-12-19 03:19:22] 2025-12-18 18:18:44,149 | INFO     | sum of deviations: -44063994434.5
[2025-12-19 03:19:22] 2025-12-18 18:18:44,149 | INFO     | mean x: 1766076674.5
[2025-12-19 03:19:22] 2025-12-18 18:18:44,149 | INFO     | mean y: 2413701.217647059
[2025-12-19 03:19:22] 2025-12-18 18:18:44,149 | INFO     | intersect: 51086221002.645935
[2025-12-19 03:19:22] 2025-12-18 18:18:44,150 | INFO     | chi2: 2.9459591887379735
[2025-12-19 03:19:22] 2025-12-18 18:18:44,150 | INFO     | sum of square deviations: 1392881930.0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,150 | INFO     | sum of deviations: -32184095198.0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,150 | INFO     | mean x: 1766076522.0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,150 | INFO     | mean y: 2427315.6121212123
[2025-12-19 03:19:22] 2025-12-18 18:18:44,150 | INFO     | intersect: 40809601051.43677
[2025-12-19 03:19:22] 2025-12-18 18:18:44,150 | INFO     | chi2: 2.310776831855129
[2025-12-19 03:19:22] 2025-12-18 18:18:44,150 | INFO     | current chi2=2.310776831855129 (change=21.56113904466381 %)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,150 | INFO     | right removable region: 164
[2025-12-19 03:19:22] 2025-12-18 18:18:44,151 | INFO     | sum of square deviations: 1392881930.0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,151 | INFO     | sum of deviations: -75429139043.00006
[2025-12-19 03:19:22] 2025-12-18 18:18:44,151 | INFO     | mean x: 1766076827.0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,151 | INFO     | mean y: 2450044.4606060605
[2025-12-19 03:19:22] 2025-12-18 18:18:44,151 | INFO     | intersect: 95641320558.34785
[2025-12-19 03:19:22] 2025-12-18 18:18:44,151 | INFO     | chi2: 1.0542167241072276
[2025-12-19 03:19:22] 2025-12-18 18:18:44,151 | INFO     | current chi2=1.0542167241072276 (change=64.21482252241091 %)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,151 | INFO     | sum of square deviations: 1270051720.0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,152 | INFO     | sum of deviations: -69282996965.49998
[2025-12-19 03:19:22] 2025-12-18 18:18:44,152 | INFO     | mean x: 1766076979.5
[2025-12-19 03:19:22] 2025-12-18 18:18:44,152 | INFO     | mean y: 2442390.38125
[2025-12-19 03:19:22] 2025-12-18 18:18:44,152 | INFO     | intersect: 96344271691.26822
[2025-12-19 03:19:22] 2025-12-18 18:18:44,152 | INFO     | chi2: 1.0530020888002625
[2025-12-19 03:19:22] 2025-12-18 18:18:44,152 | INFO     | current chi2=1.0530020888002625 (change=0.11521685050042325 %)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,152 | INFO     | left removable region: 20
[2025-12-19 03:19:22] 2025-12-18 18:18:44,152 | INFO     | sum of square deviations: 925859220.0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | sum of deviations: -43151599531.000015
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | mean x: 1766077101.5
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | mean y: 2438050.486111111
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | intersect: 82314143954.10855
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | chi2: 0.3654790358621299
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | current memory leak: -46.61 B/s (using 144 data points, chi2=0.37)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | could have reported an average CPU frequency of 3613 MHz (9 samples)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | ..............................
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | . Timing measurements:
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | . get job = 0 s
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | . initial setup = 23 s
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | . payload setup = 3 s
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | . stage-in = 0 s
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | . payload execution = 10322 s
[2025-12-19 03:19:22] 2025-12-18 18:18:44,153 | INFO     | . stage-out = 0 s
[2025-12-19 03:19:22] 2025-12-18 18:18:44,154 | INFO     | . log creation = 0 s
[2025-12-19 03:19:22] 2025-12-18 18:18:44,154 | INFO     | ..............................
[2025-12-19 03:19:22] 2025-12-18 18:18:44,170 | INFO     | time since job start (10426s) is within the limit (174528.0s)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | 
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | job summary report
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | --------------------------------------------------
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | PanDA job id: 6932713596
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | task id: 47898763
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | errors: (none)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | pilot state: finished 
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | transexitcode: 0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | exeerrorcode: 0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | exeerrordiag: 
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | exitcode: 0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | exitmsg: OK
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | cpuconsumptiontime: 27614 s
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | nevents: 400
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | neventsw: 0
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | pid: 1323229
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | pgrp: 1323229
[2025-12-19 03:19:22] 2025-12-18 18:18:44,426 | INFO     | corecount: 3
[2025-12-19 03:19:22] 2025-12-18 18:18:44,427 | INFO     | event service: False
[2025-12-19 03:19:22] 2025-12-18 18:18:44,427 | INFO     | sizes: {0: 2283958, 3: 2284220, 11: 2284248, 10329: 2312982, 10330: 2322035, 10412: 2322237}
[2025-12-19 03:19:22] 2025-12-18 18:18:44,427 | INFO     | --------------------------------------------------
[2025-12-19 03:19:22] 2025-12-18 18:18:44,427 | INFO     | 
[2025-12-19 03:19:22] 2025-12-18 18:18:44,427 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-12-19 03:19:22] 2025-12-18 18:18:44,435 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-19 03:19:22] 2025-12-18 18:18:44,436 | INFO     | job 6932713596 has completed (purged errors)
[2025-12-19 03:19:22] 2025-12-18 18:18:44,437 | INFO     | overall cleanup function is called
[2025-12-19 03:19:22] 2025-12-18 18:18:45,442 | INFO     | --- collectZombieJob: --- 10, [1323229]
[2025-12-19 03:19:22] 2025-12-18 18:18:45,442 | INFO     | zombie collector waiting for pid 1323229
[2025-12-19 03:19:22] 2025-12-18 18:18:45,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-19 03:19:22] 2025-12-18 18:18:45,442 | INFO     | collected zombie processes
[2025-12-19 03:19:22] 2025-12-18 18:18:45,442 | INFO     | will attempt to kill all subprocesses of pid=1323229
[2025-12-19 03:19:22] 2025-12-18 18:18:45,474 | INFO     | process IDs to be killed: [1323229] (in reverse order)
[2025-12-19 03:19:22] 2025-12-18 18:18:45,492 | WARNING  | found no corresponding commands to process id(s)
[2025-12-19 03:19:22] 2025-12-18 18:18:45,492 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-19 03:19:22] 2025-12-18 18:18:45,493 | INFO     | did not find any defunct processes belonging to 1323229
[2025-12-19 03:19:22] 2025-12-18 18:18:45,494 | INFO     | did not find any defunct processes belonging to 1323229
[2025-12-19 03:19:22] 2025-12-18 18:18:45,494 | INFO     | ready for new job
[2025-12-19 03:19:22] 2025-12-18 18:18:45,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-19 03:19:22] 2025-12-18 18:18:45,496 | INFO     | ***************************************
[2025-12-19 03:19:22] 2025-12-18 18:18:45,496 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-19 03:19:22] 2025-12-18 18:18:45,496 | INFO     | ***************************************
[2025-12-19 03:19:22] 2025-12-18 18:18:45,496 | INFO     | 
[2025-12-19 03:19:22] 2025-12-18 18:18:45,496 | INFO     | architecture information:
[2025-12-19 03:19:22] 2025-12-18 18:18:45,496 | INFO     | executing command: cat /etc/os-release
[2025-12-19 03:19:22] 2025-12-18 18:18:45,504 | INFO     | cat /etc/os-release:
[2025-12-19 03:19:22] NAME="CentOS Linux"
[2025-12-19 03:19:22] VERSION="7 (Core)"
[2025-12-19 03:19:22] ID="centos"
[2025-12-19 03:19:22] ID_LIKE="rhel fedora"
[2025-12-19 03:19:22] VERSION_ID="7"
[2025-12-19 03:19:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 03:19:22] ANSI_COLOR="0;31"
[2025-12-19 03:19:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 03:19:22] HOME_URL="https://www.centos.org/"
[2025-12-19 03:19:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 03:19:22] 
[2025-12-19 03:19:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 03:19:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 03:19:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 03:19:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 03:19:22] 
[2025-12-19 03:19:22] 2025-12-18 18:18:45,505 | INFO     | ***************************************
[2025-12-19 03:19:22] 2025-12-18 18:18:46,007 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-12-19 03:19:22] 2025-12-18 18:18:46,016 | INFO     | sufficient remaining disk space (114422710272 B)
[2025-12-19 03:19:22] 2025-12-18 18:18:46,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 03:19:22] 2025-12-18 18:18:46,016 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 03:19:22] 2025-12-18 18:18:46,016 | INFO     | update_server=False
[2025-12-19 03:19:22] 2025-12-18 18:18:46,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 03:19:22] 2025-12-18 18:18:46,016 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-19 03:19:22] 2025-12-18 18:18:46,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 03:19:22] 2025-12-18 18:18:46,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 03:19:22] 2025-12-18 18:18:46,017 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 03:19:22] 2025-12-18 18:18:46,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 03:19:22] 2025-12-18 18:18:46,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 03:19:22] 2025-12-18 18:18:46,082 | INFO     | all payload control threads have been joined
[2025-12-19 03:19:22] 2025-12-18 18:18:46,082 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 03:19:22] 2025-12-18 18:18:46,082 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 03:19:22] 2025-12-18 18:18:46,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 03:19:22] 2025-12-18 18:18:46,083 | INFO     | will abort loop
[2025-12-19 03:19:22] 2025-12-18 18:18:46,297 | INFO     | all data control threads have been joined
[2025-12-19 03:19:22] 2025-12-18 18:18:47,021 | INFO     | [job] retrieve thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,022 | INFO     | [job] queue monitor thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,087 | INFO     | [job] job monitor thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,087 | INFO     | [payload] control thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,200 | INFO     | all job control threads have been joined
[2025-12-19 03:19:22] 2025-12-18 18:18:47,257 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,302 | INFO     | [data] control thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,610 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,647 | INFO     | [payload] failed_post thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,689 | INFO     | [payload] validate_post thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,707 | INFO     | [job] validate thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,914 | INFO     | [data] copytool_in thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:47,989 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:48,021 | INFO     | [data] copytool_out thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:48,206 | INFO     | [job] control thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:49,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 03:19:22] 2025-12-18 18:18:53,365 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:18:57,008 | INFO     | job.realtimelogging is not enabled
[2025-12-19 03:19:22] 2025-12-18 18:18:58,013 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 03:19:22] 2025-12-18 18:19:16,043 | INFO     | [monitor] cgroup control has ended
[2025-12-19 03:19:22] 2025-12-18 18:19:17,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165014107968)>', '<ExcThread(monitor, started 140164571588352)>']
[2025-12-19 03:19:22] 2025-12-18 18:19:18,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 03:19:22] 2025-12-18 18:19:18,176 | INFO     | [monitor] control thread has ended
[2025-12-19 03:19:22] 2025-12-18 18:19:22,261 | INFO     | all workflow threads have been joined
[2025-12-19 03:19:22] 2025-12-18 18:19:22,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 03:19:22] 2025-12-18 18:19:22,261 | INFO     | traces error code: 0
[2025-12-19 03:19:22] 2025-12-18 18:19:22,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 03:19:22] 2025-12-18 18:19:22,320 [wrapper] ==== pilot stdout END ====
[2025-12-19 03:19:22] 2025-12-18 18:19:22,321 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 03:19:22] 2025-12-18 18:19:22,323 [wrapper] pilotpid: 1316685
[2025-12-19 03:19:22] 2025-12-18 18:19:22,324 [wrapper] Pilot exit status: 0
[2025-12-19 03:19:22] 2025-12-18 18:19:22,330 [wrapper] pandaids: 6932713596
[2025-12-19 03:19:22] 2025-12-18 18:19:22,341 [wrapper] cleanup supervisor_pilot 1342409 1316686
[2025-12-19 03:19:22] 2025-12-18 18:19:22,343 [wrapper] Test setup, not cleaning
[2025-12-19 03:19:22] 2025-12-18 18:19:22,344 [wrapper] apfmon messages muted
[2025-12-19 03:19:22] 2025-12-18 18:19:22,346 [wrapper] ==== wrapper stdout END ====
[2025-12-19 03:19:22] 2025-12-18 18:19:22,347 [wrapper] ==== wrapper stderr END ====
[2025-12-19 03:19:22]  *** Error codes and diagnostics ***
[2025-12-19 03:19:22]     "exeErrorCode": 0,
[2025-12-19 03:19:22]     "exeErrorDiag": "",
[2025-12-19 03:19:22]     "pilotErrorCode": 0,
[2025-12-19 03:19:22]     "pilotErrorDiag": "",
[2025-12-19 03:19:22]  *** Listing of results directory ***
[2025-12-19 03:19:22] total 449600
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc    579449 Dec 18 09:45 pilot3.tar.gz
[2025-12-19 03:19:22] -rwx------. 1 boinc boinc     36322 Dec 18 09:48 runpilot2-wrapper.sh
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc      5112 Dec 18 09:49 queuedata.json
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc       100 Dec 19 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 03:19:22] -rwxr-xr-x. 1 boinc boinc      7986 Dec 19 00:24 run_atlas
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc       105 Dec 19 00:24 job.xml
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc      9312 Dec 19 00:24 init_data.xml
[2025-12-19 03:19:22] -rw-r--r--. 2 boinc boinc 227122571 Dec 19 00:24 EVNT.47898761._000838.pool.root.1
[2025-12-19 03:19:22] -rw-r--r--. 2 boinc boinc     15847 Dec 19 00:24 start_atlas.sh
[2025-12-19 03:19:22] drwxrwx--x. 2 boinc boinc        68 Dec 19 00:24 shared
[2025-12-19 03:19:22] -rw-r--r--. 2 boinc boinc    592397 Dec 19 00:24 input.tar.gz
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc         0 Dec 19 00:24 boinc_lockfile
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc      2508 Dec 19 00:24 pandaJob.out
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc    988125 Dec 19 00:24 agis_schedconf.cvmfs.json
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc   1516240 Dec 19 00:24 agis_ddmendpoints.agis.ALL.json
[2025-12-19 03:19:22] drwx------. 5 boinc boinc      4096 Dec 19 00:24 pilot3
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc 225853204 Dec 19 03:16 HITS.47898763._021781.pool.root.1
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc       530 Dec 19 03:17 boinc_task_state.xml
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc      1018 Dec 19 03:17 memory_monitor_summary.json
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc    321998 Dec 19 03:17 log.47898763._021781.job.log.tgz.1
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc        95 Dec 19 03:18 pilot_heartbeat.json
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc      7772 Dec 19 03:18 heartbeat.json
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc        28 Dec 19 03:19 wrapper_checkpoint.txt
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc      8192 Dec 19 03:19 boinc_mmap_file
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc      4811 Dec 19 03:19 pilotlog.txt
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc   1433756 Dec 19 03:19 log.47898763._021781.job.log.1
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc       357 Dec 19 03:19 output.list
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc       620 Dec 19 03:19 runtime_log
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc   1771520 Dec 19 03:19 result.tar.gz
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc      8776 Dec 19 03:19 runtime_log.err
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc       646 Dec 19 03:19 52ALDm4MHq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6AdKDmrjEj4m.diag
[2025-12-19 03:19:22] -rw-r--r--. 1 boinc boinc     20875 Dec 19 03:19 stderr.txt
[2025-12-19 03:19:22] HITS file was successfully produced:
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc 225853204 Dec 19 03:16 shared/HITS.pool.root.1
[2025-12-19 03:19:22]  *** Contents of shared directory: ***
[2025-12-19 03:19:22] total 444688
[2025-12-19 03:19:22] -rw-r--r--. 2 boinc boinc 227122571 Dec 19 00:24 ATLAS.root_0
[2025-12-19 03:19:22] -rw-r--r--. 2 boinc boinc     15847 Dec 19 00:24 start_atlas.sh
[2025-12-19 03:19:22] -rw-r--r--. 2 boinc boinc    592397 Dec 19 00:24 input.tar.gz
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc 225853204 Dec 19 03:16 HITS.pool.root.1
[2025-12-19 03:19:22] -rw-------. 1 boinc boinc   1771520 Dec 19 03:19 result.tar.gz
03:19:23 (1313015): run_atlas exited; CPU time 27653.882581
03:19:23 (1313015): called boinc_finish(0)

</stderr_txt>
]]>

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