Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:30:26 (2385528): wrapper (7.7.26015): starting
23:30:26 (2385528): wrapper: running run_atlas (--nthreads 2)
[2025-12-18 23:30:26] Arguments: --nthreads 2
[2025-12-18 23:30:26] Threads: 2
[2025-12-18 23:30:26] Checking for CVMFS
[2025-12-18 23:30:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 23:30:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 23:30:26] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 23:30:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 23:30:26] 2.9.2.0 769479 8018 61132 154167 3 57 36473293 36864000 0 130560 0 4274958 99.987 293937 9342 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 23:30:26] CVMFS is ok
[2025-12-18 23:30:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 23:30:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 23:30:26] Further information can be found at the LHC@home message board.
[2025-12-18 23:30:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 23:30:26] Checking for apptainer binary...
[2025-12-18 23:30:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 23:30:26] Running /usr/bin/apptainer --version
[2025-12-18 23:30:26] apptainer version 1.4.1-1.1
[2025-12-18 23:30:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 23:30:27] thA337
[2025-12-18 23:30:27] apptainer works
[2025-12-18 23:30:27] Set ATHENA_PROC_NUMBER=2
[2025-12-18 23:30:27] Set ATHENA_CORE_NUMBER=2
[2025-12-18 23:30:27] Starting ATLAS job with PandaID=6932714252
[2025-12-18 23:30:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-19 01:40:58]  *** The last 200 lines of the pilot log: ***
[2025-12-19 01:40:58] 2025-12-19 00:39:56,640 | INFO     | architecture information:
[2025-12-19 01:40:58] 2025-12-19 00:39:56,641 | INFO     | executing command: cat /etc/os-release
[2025-12-19 01:40:58] 2025-12-19 00:39:56,649 | INFO     | cat /etc/os-release:
[2025-12-19 01:40:58] NAME="CentOS Linux"
[2025-12-19 01:40:58] VERSION="7 (Core)"
[2025-12-19 01:40:58] ID="centos"
[2025-12-19 01:40:58] ID_LIKE="rhel fedora"
[2025-12-19 01:40:58] VERSION_ID="7"
[2025-12-19 01:40:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-19 01:40:58] ANSI_COLOR="0;31"
[2025-12-19 01:40:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-19 01:40:58] HOME_URL="https://www.centos.org/"
[2025-12-19 01:40:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-19 01:40:58] 
[2025-12-19 01:40:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-19 01:40:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-19 01:40:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-19 01:40:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-19 01:40:58] 
[2025-12-19 01:40:58] 2025-12-19 00:39:56,649 | INFO     | ***************************************
[2025-12-19 01:40:58] 2025-12-19 00:39:57,152 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-19 01:40:58] 2025-12-19 00:39:57,163 | INFO     | sufficient remaining disk space (475176894464 B)
[2025-12-19 01:40:58] 2025-12-19 00:39:57,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-19 01:40:58] 2025-12-19 00:39:57,163 | INFO     | current server update state: UPDATING_FINAL
[2025-12-19 01:40:58] 2025-12-19 00:39:57,164 | INFO     | update_server=False
[2025-12-19 01:40:58] 2025-12-19 00:39:57,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-19 01:40:58] 2025-12-19 00:39:57,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-19 01:40:58] 2025-12-19 00:39:57,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-19 01:40:58] 2025-12-19 00:39:57,593 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-19 01:40:58] 2025-12-19 00:39:57,593 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-19 01:40:58] 2025-12-19 00:39:57,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-19 01:40:58] 2025-12-19 00:39:57,593 | INFO     | will abort loop
[2025-12-19 01:40:58] 2025-12-19 00:39:58,162 | INFO     | all data control threads have been joined
[2025-12-19 01:40:58] 2025-12-19 00:39:58,169 | INFO     | [job] retrieve thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:58,169 | INFO     | [job] queue monitor thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:58,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-19 01:40:58] 2025-12-19 00:39:58,443 | INFO     | all payload control threads have been joined
[2025-12-19 01:40:58] 2025-12-19 00:39:58,599 | INFO     | [job] job monitor thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:58,737 | INFO     | [payload] failed_post thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:58,757 | INFO     | all job control threads have been joined
[2025-12-19 01:40:58] 2025-12-19 00:39:59,168 | INFO     | [data] control thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:59,169 | INFO     | [data] copytool_out thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:59,263 | INFO     | [job] validate thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:59,385 | INFO     | [payload] validate_post thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:59,392 | INFO     | [job] create_data_payload thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:59,408 | INFO     | [payload] validate_pre thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:59,449 | INFO     | [payload] control thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:59,597 | INFO     | [payload] execute_payloads thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:59,624 | INFO     | [data] copytool_in thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:39:59,763 | INFO     | [job] control thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:40:02,331 | INFO     | [data] queue_monitor thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:40:07,391 | INFO     | job.realtimelogging is not enabled
[2025-12-19 01:40:58] 2025-12-19 00:40:08,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-19 01:40:58] 2025-12-19 00:40:27,452 | INFO     | PID=2389238 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-19 01:40:58] 2025-12-19 00:40:27,452 | INFO     | found 0 job(s) in 20 queues
[2025-12-19 01:40:58] 2025-12-19 00:40:27,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-19 01:40:58] 2025-12-19 00:40:27,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-19 01:40:58] 2025-12-19 00:40:52,139 | INFO     | [monitor] cgroup control has ended
[2025-12-19 01:40:58] 2025-12-19 00:40:53,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182281942848)>', '<ExcThread(monitor, started 140181315233536)>']
[2025-12-19 01:40:58] 2025-12-19 00:40:54,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-19 01:40:58] 2025-12-19 00:40:54,593 | INFO     | [monitor] control thread has ended
[2025-12-19 01:40:58] 2025-12-19 00:40:58,746 | INFO     | all workflow threads have been joined
[2025-12-19 01:40:58] 2025-12-19 00:40:58,746 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-19 01:40:58] 2025-12-19 00:40:58,747 | INFO     | traces error code: 0
[2025-12-19 01:40:58] 2025-12-19 00:40:58,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-19 01:40:58] 2025-12-19 00:40:58,789 [wrapper] ==== pilot stdout END ====
[2025-12-19 01:40:58] 2025-12-19 00:40:58,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-19 01:40:58] 2025-12-19 00:40:58,793 [wrapper] pilotpid: 2389238
[2025-12-19 01:40:58] 2025-12-19 00:40:58,795 [wrapper] Pilot exit status: 0
[2025-12-19 01:40:58] 2025-12-19 00:40:58,801 [wrapper] pandaids: 6932714252
[2025-12-19 01:40:58] 2025-12-19 00:40:58,812 [wrapper] cleanup supervisor_pilot 2409868 2389239
[2025-12-19 01:40:58] 2025-12-19 00:40:58,814 [wrapper] Test setup, not cleaning
[2025-12-19 01:40:58] 2025-12-19 00:40:58,816 [wrapper] apfmon messages muted
[2025-12-19 01:40:58] 2025-12-19 00:40:58,818 [wrapper] ==== wrapper stdout END ====
[2025-12-19 01:40:58] 2025-12-19 00:40:58,820 [wrapper] ==== wrapper stderr END ====
[2025-12-19 01:40:58]  *** Error codes and diagnostics ***
[2025-12-19 01:40:58]     "exeErrorCode": 0,
[2025-12-19 01:40:58]     "exeErrorDiag": "",
[2025-12-19 01:40:58]     "pilotErrorCode": 0,
[2025-12-19 01:40:58]     "pilotErrorDiag": "",
[2025-12-19 01:40:58]  *** Listing of results directory ***
[2025-12-19 01:40:58] total 332824
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc      5112 Dec 18 01:45 queuedata.json
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc    579449 Dec 18 01:45 pilot3.tar.gz
[2025-12-19 01:40:58] -rwx------ 1 boinc boinc     36322 Dec 18 01:46 runpilot2-wrapper.sh
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc       100 Dec 18 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-19 01:40:58] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 23:30 run_atlas
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc       105 Dec 18 23:30 job.xml
[2025-12-19 01:40:58] -rw-r--r-- 2 boinc boinc 189945198 Dec 18 23:30 EVNT.47886929._000535.pool.root.1
[2025-12-19 01:40:58] -rw-r--r-- 2 boinc boinc    592401 Dec 18 23:30 input.tar.gz
[2025-12-19 01:40:58] -rw-r--r-- 2 boinc boinc     15847 Dec 18 23:30 start_atlas.sh
[2025-12-19 01:40:58] drwxrwx--x 2 boinc boinc      4096 Dec 18 23:30 shared
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc         0 Dec 18 23:30 boinc_setup_complete
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc      6206 Dec 18 23:30 init_data.xml
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc         0 Dec 18 23:30 boinc_lockfile
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc      2515 Dec 18 23:30 pandaJob.out
[2025-12-19 01:40:58] -rw------- 1 boinc boinc    988880 Dec 18 23:30 agis_schedconf.cvmfs.json
[2025-12-19 01:40:58] -rw------- 1 boinc boinc   1516240 Dec 18 23:30 agis_ddmendpoints.agis.ALL.json
[2025-12-19 01:40:58] drwx------ 5 boinc boinc      4096 Dec 18 23:30 pilot3
[2025-12-19 01:40:58] -rw------- 1 boinc boinc 144187500 Dec 19 01:39 HITS.47886933._012941.pool.root.1
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc       529 Dec 19 01:39 boinc_task_state.xml
[2025-12-19 01:40:58] -rw------- 1 boinc boinc      1011 Dec 19 01:39 memory_monitor_summary.json
[2025-12-19 01:40:58] -rw------- 1 boinc boinc    271449 Dec 19 01:39 log.47886933._012941.job.log.tgz.1
[2025-12-19 01:40:58] -rw------- 1 boinc boinc      7749 Dec 19 01:39 heartbeat.json
[2025-12-19 01:40:58] -rw------- 1 boinc boinc        95 Dec 19 01:40 pilot_heartbeat.json
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc        27 Dec 19 01:40 wrapper_checkpoint.txt
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc      8192 Dec 19 01:40 boinc_mmap_file
[2025-12-19 01:40:58] -rw------- 1 boinc boinc      5010 Dec 19 01:40 pilotlog.txt
[2025-12-19 01:40:58] -rw------- 1 boinc boinc   1115000 Dec 19 01:40 log.47886933._012941.job.log.1
[2025-12-19 01:40:58] -rw------- 1 boinc boinc       357 Dec 19 01:40 output.list
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc       620 Dec 19 01:40 runtime_log
[2025-12-19 01:40:58] -rw------- 1 boinc boinc   1402880 Dec 19 01:40 result.tar.gz
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc      8897 Dec 19 01:40 runtime_log.err
[2025-12-19 01:40:58] -rw------- 1 boinc boinc       659 Dec 19 01:40 SfDODmxKHq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZ5cKDmBxmjLm.diag
[2025-12-19 01:40:58] -rw-r--r-- 1 boinc boinc      9293 Dec 19 01:40 stderr.txt
[2025-12-19 01:40:58] HITS file was successfully produced:
[2025-12-19 01:40:58] -rw------- 1 boinc boinc 144187500 Dec 19 01:39 shared/HITS.pool.root.1
[2025-12-19 01:40:58]  *** Contents of shared directory: ***
[2025-12-19 01:40:58] total 328284
[2025-12-19 01:40:58] -rw-r--r-- 2 boinc boinc 189945198 Dec 18 23:30 ATLAS.root_0
[2025-12-19 01:40:58] -rw-r--r-- 2 boinc boinc    592401 Dec 18 23:30 input.tar.gz
[2025-12-19 01:40:58] -rw-r--r-- 2 boinc boinc     15847 Dec 18 23:30 start_atlas.sh
[2025-12-19 01:40:58] -rw------- 1 boinc boinc 144187500 Dec 19 01:39 HITS.pool.root.1
[2025-12-19 01:40:58] -rw------- 1 boinc boinc   1402880 Dec 19 01:40 result.tar.gz
01:41:00 (2385528): run_atlas exited; CPU time 15133.772073
01:41:00 (2385528): called boinc_finish(0)

</stderr_txt>
]]>

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