Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:52:21 (27258): wrapper (7.7.26015): starting
04:52:21 (27258): wrapper: running run_atlas (--nthreads 8)
[2025-12-18 04:52:21] Arguments: --nthreads 8
[2025-12-18 04:52:21] Threads: 8
[2025-12-18 04:52:21] Checking for CVMFS
[2025-12-18 04:52:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 04:52:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 04:52:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 04:52:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 04:52:21] 2.11.2.0 18601 133390 140668 154145 3 57 10512718 18432001 1833 130560 0 94682568 99.985 4963056 31742 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-18 04:52:21] CVMFS is ok
[2025-12-18 04:52:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 04:52:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 04:52:21] Further information can be found at the LHC@home message board.
[2025-12-18 04:52:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 04:52:21] Checking for apptainer binary...
[2025-12-18 04:52:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 04:52:21] Running /usr/bin/apptainer --version
[2025-12-18 04:52:21] apptainer version 1.3.2-1.el7
[2025-12-18 04:52:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 04:52:22] c-206-13.aglt2.org
[2025-12-18 04:52:22] apptainer works
[2025-12-18 04:52:22] Set ATHENA_PROC_NUMBER=8
[2025-12-18 04:52:22] Set ATHENA_CORE_NUMBER=8
[2025-12-18 04:52:22] Starting ATLAS job with PandaID=6932673883
[2025-12-18 04:52:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 08:06:57]  *** The last 200 lines of the pilot log: ***
[2025-12-18 08:06:57] 2025-12-18 13:06:15,537 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-18 08:06:57] 2025-12-18 13:06:15,537 | INFO     | log transfer has been attempted: DONE
[2025-12-18 08:06:57] 2025-12-18 13:06:15,537 | INFO     | job 6932673883 has finished - writing final server update
[2025-12-18 08:06:57] 2025-12-18 13:06:15,537 | INFO     | total number of processed events: 400 (read)
[2025-12-18 08:06:57] 2025-12-18 13:06:15,538 | INFO     | executing command: lscpu
[2025-12-18 08:06:57] 2025-12-18 13:06:15,564 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 08:06:57] 2025-12-18 13:06:16,858 | INFO     | monitor loop #835: job 0:6932673883 is in state 'finished'
[2025-12-18 08:06:57] 2025-12-18 13:06:16,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 08:06:57] 2025-12-18 13:06:17,531 | INFO     | time since job start (11624s) is within the limit (174528.0s)
[2025-12-18 08:06:57] 2025-12-18 13:06:18,666 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-18 08:06:57] 2025-12-18 13:06:18,670 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2394.75
[2025-12-18 08:06:57] 2025-12-18 13:06:18,673 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6932673883/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 08:06:57] 2025-12-18 13:06:18,673 | INFO     | extracted standard info from prmon json
[2025-12-18 08:06:57] 2025-12-18 13:06:18,673 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 08:06:57] 2025-12-18 13:06:18,673 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 08:06:57] 2025-12-18 13:06:18,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 08:06:57] 2025-12-18 13:06:18,674 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 08:06:57] 2025-12-18 13:06:18,676 | INFO     | fitting pss+swap vs Time
[2025-12-18 08:06:57] 2025-12-18 13:06:18,677 | INFO     | sum of square deviations: 2126802667.5
[2025-12-18 08:06:57] 2025-12-18 13:06:18,678 | INFO     | sum of deviations: 9062110803.5
[2025-12-18 08:06:57] 2025-12-18 13:06:18,678 | INFO     | mean x: 1766057341.5
[2025-12-18 08:06:57] 2025-12-18 13:06:18,678 | INFO     | mean y: 2473615.005263158
[2025-12-18 08:06:57] 2025-12-18 13:06:18,678 | INFO     | intersect: -7522534491.562592
[2025-12-18 08:06:57] 2025-12-18 13:06:18,678 | INFO     | chi2: 1.5035063462570508
[2025-12-18 08:06:57] 2025-12-18 13:06:18,679 | INFO     | sum of square deviations: 1963274020.0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,679 | INFO     | sum of deviations: 8828319366.999998
[2025-12-18 08:06:57] 2025-12-18 13:06:18,680 | INFO     | mean x: 1766057189.0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,680 | INFO     | mean y: 2473396.9405405405
[2025-12-18 08:06:57] 2025-12-18 13:06:18,680 | INFO     | intersect: -7939014508.49116
[2025-12-18 08:06:57] 2025-12-18 13:06:18,680 | INFO     | chi2: 1.5043041665948926
[2025-12-18 08:06:57] 2025-12-18 13:06:18,680 | INFO     | current chi2=1.5043041665948926 (change=-0.053063982059535206 %)
[2025-12-18 08:06:57] 2025-12-18 13:06:18,680 | INFO     | right removable region: 184
[2025-12-18 08:06:57] 2025-12-18 13:06:18,681 | INFO     | sum of square deviations: 1963274020.0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,681 | INFO     | sum of deviations: -17375641014.0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,682 | INFO     | mean x: 1766057494.0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,682 | INFO     | mean y: 2497952.3675675676
[2025-12-18 08:06:57] 2025-12-18 13:06:18,682 | INFO     | intersect: 15632705815.979218
[2025-12-18 08:06:57] 2025-12-18 13:06:18,682 | INFO     | chi2: 0.15403205917248056
[2025-12-18 08:06:57] 2025-12-18 13:06:18,682 | INFO     | current chi2=0.15403205917248056 (change=89.7551440633463 %)
[2025-12-18 08:06:57] 2025-12-18 13:06:18,682 | INFO     | sum of square deviations: 1808350185.0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,683 | INFO     | sum of deviations: -18409148337.000004
[2025-12-18 08:06:57] 2025-12-18 13:06:18,683 | INFO     | mean x: 1766057646.5
[2025-12-18 08:06:57] 2025-12-18 13:06:18,684 | INFO     | mean y: 2498935.9777777777
[2025-12-18 08:06:57] 2025-12-18 13:06:18,684 | INFO     | intersect: 17981105876.044323
[2025-12-18 08:06:57] 2025-12-18 13:06:18,684 | INFO     | chi2: 0.13760456379505437
[2025-12-18 08:06:57] 2025-12-18 13:06:18,684 | INFO     | current chi2=0.13760456379505437 (change=10.664984591961575 %)
[2025-12-18 08:06:57] 2025-12-18 13:06:18,684 | INFO     | left removable region: 20
[2025-12-18 08:06:57] 2025-12-18 13:06:18,684 | INFO     | sum of square deviations: 1367709365.0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,685 | INFO     | sum of deviations: -5701161595.500001
[2025-12-18 08:06:57] 2025-12-18 13:06:18,685 | INFO     | mean x: 1766057768.5
[2025-12-18 08:06:57] 2025-12-18 13:06:18,685 | INFO     | mean y: 2485557.9573170734
[2025-12-18 08:06:57] 2025-12-18 13:06:18,685 | INFO     | intersect: 7364123185.704812
[2025-12-18 08:06:57] 2025-12-18 13:06:18,686 | INFO     | chi2: 0.07823516713126069
[2025-12-18 08:06:57] 2025-12-18 13:06:18,686 | INFO     | current memory leak: -4.17 B/s (using 164 data points, chi2=0.08)
[2025-12-18 08:06:57] 2025-12-18 13:06:18,686 | INFO     | could have reported an average CPU frequency of 2596 MHz (10 samples)
[2025-12-18 08:06:57] 2025-12-18 13:06:18,686 | INFO     | ..............................
[2025-12-18 08:06:57] 2025-12-18 13:06:18,686 | INFO     | . Timing measurements:
[2025-12-18 08:06:57] 2025-12-18 13:06:18,687 | INFO     | . get job = 0 s
[2025-12-18 08:06:57] 2025-12-18 13:06:18,687 | INFO     | . initial setup = 2 s
[2025-12-18 08:06:57] 2025-12-18 13:06:18,687 | INFO     | . payload setup = 4 s
[2025-12-18 08:06:57] 2025-12-18 13:06:18,687 | INFO     | . stage-in = 0 s
[2025-12-18 08:06:57] 2025-12-18 13:06:18,687 | INFO     | . payload execution = 11591 s
[2025-12-18 08:06:57] 2025-12-18 13:06:18,687 | INFO     | . stage-out = 2 s
[2025-12-18 08:06:57] 2025-12-18 13:06:18,687 | INFO     | . log creation = 0 s
[2025-12-18 08:06:57] 2025-12-18 13:06:18,687 | INFO     | ..............................
[2025-12-18 08:06:57] 2025-12-18 13:06:18,762 | INFO     | 
[2025-12-18 08:06:57] 2025-12-18 13:06:18,762 | INFO     | job summary report
[2025-12-18 08:06:57] 2025-12-18 13:06:18,762 | INFO     | --------------------------------------------------
[2025-12-18 08:06:57] 2025-12-18 13:06:18,762 | INFO     | PanDA job id: 6932673883
[2025-12-18 08:06:57] 2025-12-18 13:06:18,762 | INFO     | task id: 47886933
[2025-12-18 08:06:57] 2025-12-18 13:06:18,762 | INFO     | errors: (none)
[2025-12-18 08:06:57] 2025-12-18 13:06:18,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 08:06:57] 2025-12-18 13:06:18,763 | INFO     | pilot state: finished 
[2025-12-18 08:06:57] 2025-12-18 13:06:18,763 | INFO     | transexitcode: 0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,763 | INFO     | exeerrorcode: 0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,763 | INFO     | exeerrordiag: 
[2025-12-18 08:06:57] 2025-12-18 13:06:18,763 | INFO     | exitcode: 0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,764 | INFO     | exitmsg: OK
[2025-12-18 08:06:57] 2025-12-18 13:06:18,764 | INFO     | cpuconsumptiontime: 87197 s
[2025-12-18 08:06:57] 2025-12-18 13:06:18,764 | INFO     | nevents: 400
[2025-12-18 08:06:57] 2025-12-18 13:06:18,764 | INFO     | neventsw: 0
[2025-12-18 08:06:57] 2025-12-18 13:06:18,764 | INFO     | pid: 5081
[2025-12-18 08:06:57] 2025-12-18 13:06:18,764 | INFO     | pgrp: 5081
[2025-12-18 08:06:57] 2025-12-18 13:06:18,765 | INFO     | corecount: 8
[2025-12-18 08:06:57] 2025-12-18 13:06:18,765 | INFO     | event service: False
[2025-12-18 08:06:57] 2025-12-18 13:06:18,765 | INFO     | sizes: {0: 2283141, 1: 2283997, 5: 2284259, 12: 2284315, 11600: 2313748, 11604: 2322746, 11605: 2322930, 11611: 2323124}
[2025-12-18 08:06:57] 2025-12-18 13:06:18,765 | INFO     | --------------------------------------------------
[2025-12-18 08:06:57] 2025-12-18 13:06:18,765 | INFO     | 
[2025-12-18 08:06:57] 2025-12-18 13:06:18,765 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-18 08:06:57] 2025-12-18 13:06:18,779 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,780 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,780 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,780 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,780 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,781 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,781 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,781 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,783 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 08:06:57] 2025-12-18 13:06:18,783 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,783 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 08:06:57] 2025-12-18 13:06:18,783 | INFO     | job 6932673883 has completed (purged errors)
[2025-12-18 08:06:57] 2025-12-18 13:06:18,783 | INFO     | overall cleanup function is called
[2025-12-18 08:06:57] 2025-12-18 13:06:19,789 | INFO     | --- collectZombieJob: --- 10, [5081]
[2025-12-18 08:06:57] 2025-12-18 13:06:19,790 | INFO     | zombie collector waiting for pid 5081
[2025-12-18 08:06:57] 2025-12-18 13:06:19,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 08:06:57] 2025-12-18 13:06:19,790 | INFO     | collected zombie processes
[2025-12-18 08:06:57] 2025-12-18 13:06:19,790 | INFO     | will attempt to kill all subprocesses of pid=5081
[2025-12-18 08:06:57] 2025-12-18 13:06:19,948 | INFO     | process IDs to be killed: [5081] (in reverse order)
[2025-12-18 08:06:57] 2025-12-18 13:06:20,006 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 08:06:57] 2025-12-18 13:06:20,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 08:06:57] 2025-12-18 13:06:20,011 | INFO     | did not find any defunct processes belonging to 5081
[2025-12-18 08:06:57] 2025-12-18 13:06:20,016 | INFO     | did not find any defunct processes belonging to 5081
[2025-12-18 08:06:57] 2025-12-18 13:06:20,017 | INFO     | ready for new job
[2025-12-18 08:06:57] 2025-12-18 13:06:20,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 08:06:57] 2025-12-18 13:06:20,019 | INFO     | ***************************************
[2025-12-18 08:06:57] 2025-12-18 13:06:20,019 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 08:06:57] 2025-12-18 13:06:20,019 | INFO     | ***************************************
[2025-12-18 08:06:57] 2025-12-18 13:06:20,019 | INFO     | 
[2025-12-18 08:06:57] 2025-12-18 13:06:20,020 | INFO     | architecture information:
[2025-12-18 08:06:57] 2025-12-18 13:06:20,021 | INFO     | executing command: cat /etc/os-release
[2025-12-18 08:06:57] 2025-12-18 13:06:20,032 | INFO     | cat /etc/os-release:
[2025-12-18 08:06:57] NAME="CentOS Linux"
[2025-12-18 08:06:57] VERSION="7 (Core)"
[2025-12-18 08:06:57] ID="centos"
[2025-12-18 08:06:57] ID_LIKE="rhel fedora"
[2025-12-18 08:06:57] VERSION_ID="7"
[2025-12-18 08:06:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 08:06:57] ANSI_COLOR="0;31"
[2025-12-18 08:06:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 08:06:57] HOME_URL="https://www.centos.org/"
[2025-12-18 08:06:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 08:06:57] 
[2025-12-18 08:06:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 08:06:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 08:06:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 08:06:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 08:06:57] 
[2025-12-18 08:06:57] 2025-12-18 13:06:20,032 | INFO     | ***************************************
[2025-12-18 08:06:57] 2025-12-18 13:06:20,535 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-18 08:06:57] 2025-12-18 13:06:20,548 | INFO     | sufficient remaining disk space (28423749632 B)
[2025-12-18 08:06:57] 2025-12-18 13:06:20,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 08:06:57] 2025-12-18 13:06:20,549 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 08:06:57] 2025-12-18 13:06:20,549 | INFO     | update_server=False
[2025-12-18 08:06:57] 2025-12-18 13:06:20,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 08:06:57] 2025-12-18 13:06:20,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 08:06:57] 2025-12-18 13:06:20,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 08:06:57] 2025-12-18 13:06:20,550 | INFO     | aborting loop
[2025-12-18 08:06:57] 2025-12-18 13:06:20,945 | INFO     | all data control threads have been joined
[2025-12-18 08:06:57] 2025-12-18 13:06:21,012 | INFO     | all payload control threads have been joined
[2025-12-18 08:06:57] 2025-12-18 13:06:21,554 | INFO     | [job] retrieve thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:21,555 | INFO     | [job] queue monitor thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:21,555 | INFO     | [job] job monitor thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:21,856 | INFO     | [data] copytool_in thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:21,857 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:21,951 | INFO     | [data] control thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:22,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 08:06:57] 2025-12-18 13:06:22,018 | INFO     | [payload] control thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:22,150 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:22,194 | INFO     | [payload] validate_post thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:22,198 | INFO     | all job control threads have been joined
[2025-12-18 08:06:57] 2025-12-18 13:06:22,451 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:22,562 | INFO     | [job] validate thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:22,755 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:23,155 | INFO     | [payload] failed_post thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:23,204 | INFO     | [job] control thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:23,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 08:06:57] 2025-12-18 13:06:24,021 | INFO     | [data] copytool_out thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:27,575 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 08:06:57] 2025-12-18 13:06:50,730 | INFO     | PID=30961 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-18 08:06:57] 2025-12-18 13:06:50,730 | INFO     | .. there are 3 such processes running
[2025-12-18 08:06:57] 2025-12-18 13:06:50,731 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 08:06:57] 2025-12-18 13:06:50,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 08:06:57] 2025-12-18 13:06:50,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 08:06:57] 2025-12-18 13:06:51,770 | INFO     | [monitor] cgroup control has ended
[2025-12-18 08:06:57] 2025-12-18 13:06:51,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424087754560)>', '<ExcThread(monitor, started 140423771166464)>']
[2025-12-18 08:06:57] 2025-12-18 13:06:52,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 08:06:57] 2025-12-18 13:06:52,741 | INFO     | [monitor] control thread has ended
[2025-12-18 08:06:57] 2025-12-18 13:06:57,016 | INFO     | all workflow threads have been joined
[2025-12-18 08:06:57] 2025-12-18 13:06:57,017 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 08:06:57] 2025-12-18 13:06:57,017 | INFO     | traces error code: 0
[2025-12-18 08:06:57] 2025-12-18 13:06:57,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 08:06:57] 2025-12-18 13:06:57,125 [wrapper] ==== pilot stdout END ====
[2025-12-18 08:06:57] 2025-12-18 13:06:57,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 08:06:57] 2025-12-18 13:06:57,131 [wrapper] pilotpid: 30961
[2025-12-18 08:06:57] 2025-12-18 13:06:57,133 [wrapper] Pilot exit status: 0
[2025-12-18 08:06:57] 2025-12-18 13:06:57,144 [wrapper] pandaids: 6932673883
[2025-12-18 08:06:57] 2025-12-18 13:06:57,182 [wrapper] cleanup supervisor_pilot   763 30962
[2025-12-18 08:06:57] 2025-12-18 13:06:57,184 [wrapper] Test setup, not cleaning
[2025-12-18 08:06:57] 2025-12-18 13:06:57,187 [wrapper] apfmon messages muted
[2025-12-18 08:06:57] 2025-12-18 13:06:57,189 [wrapper] ==== wrapper stdout END ====
[2025-12-18 08:06:57] 2025-12-18 13:06:57,191 [wrapper] ==== wrapper stderr END ====
[2025-12-18 08:06:57]  *** Error codes and diagnostics ***
[2025-12-18 08:06:57]     "exeErrorCode": 0,
[2025-12-18 08:06:57]     "exeErrorDiag": "",
[2025-12-18 08:06:57]     "pilotErrorCode": 0,
[2025-12-18 08:06:57]     "pilotErrorDiag": "",
[2025-12-18 08:06:57]  *** Listing of results directory ***
[2025-12-18 08:06:57] total 332280
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas    579449 Dec 17 17:04 pilot3.tar.gz
[2025-12-18 08:06:57] -rwx------ 1 boincer umatlas     36322 Dec 17 17:07 runpilot2-wrapper.sh
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas      5112 Dec 17 17:09 queuedata.json
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas       100 Dec 18 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 08:06:57] -rwxr-xr-x 1 boincer umatlas      7986 Dec 18 04:52 run_atlas
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas       105 Dec 18 04:52 job.xml
[2025-12-18 08:06:57] -rw-r--r-- 2 boincer umatlas 191708132 Dec 18 04:52 EVNT.47886929._000558.pool.root.1
[2025-12-18 08:06:57] -rw-r--r-- 2 boincer umatlas     15847 Dec 18 04:52 start_atlas.sh
[2025-12-18 08:06:57] drwxrwx--x 2 boincer umatlas      4096 Dec 18 04:52 shared
[2025-12-18 08:06:57] -rw-r--r-- 2 boincer umatlas    592393 Dec 18 04:52 input.tar.gz
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas         0 Dec 18 04:52 boinc_lockfile
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas      2515 Dec 18 04:52 pandaJob.out
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas        57 Dec 18 04:52 setup.sh.local
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas    988133 Dec 18 04:52 agis_schedconf.cvmfs.json
[2025-12-18 08:06:57] drwx------ 5 boincer umatlas      4096 Dec 18 04:52 pilot3
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas      5951 Dec 18 08:04 init_data.xml
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas 140550039 Dec 18 08:05 HITS.47886933._011390.pool.root.1
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas       530 Dec 18 08:05 boinc_task_state.xml
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas      1054 Dec 18 08:06 memory_monitor_summary.json
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas   1516240 Dec 18 08:06 agis_ddmendpoints.agis.ALL.json
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas    419511 Dec 18 08:06 log.47886933._011390.job.log.tgz.1
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas      7868 Dec 18 08:06 heartbeat.json
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas      8192 Dec 18 08:06 boinc_mmap_file
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas        28 Dec 18 08:06 wrapper_checkpoint.txt
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas        95 Dec 18 08:06 pilot_heartbeat.json
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas      4821 Dec 18 08:06 pilotlog.txt
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas   1623934 Dec 18 08:06 log.47886933._011390.job.log.1
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas       357 Dec 18 08:06 output.list
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas       620 Dec 18 08:06 runtime_log
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas   2058240 Dec 18 08:06 result.tar.gz
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas      9343 Dec 18 08:06 runtime_log.err
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas       662 Dec 18 08:06 OeNKDmQrEq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHvcKDmnF5gWn.diag
[2025-12-18 08:06:57] -rw-r--r-- 1 boincer umatlas     21310 Dec 18 08:06 stderr.txt
[2025-12-18 08:06:57] HITS file was successfully produced:
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas 140550039 Dec 18 08:05 shared/HITS.pool.root.1
[2025-12-18 08:06:57]  *** Contents of shared directory: ***
[2025-12-18 08:06:57] total 327084
[2025-12-18 08:06:57] -rw-r--r-- 2 boincer umatlas 191708132 Dec 18 04:52 ATLAS.root_0
[2025-12-18 08:06:57] -rw-r--r-- 2 boincer umatlas     15847 Dec 18 04:52 start_atlas.sh
[2025-12-18 08:06:57] -rw-r--r-- 2 boincer umatlas    592393 Dec 18 04:52 input.tar.gz
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas 140550039 Dec 18 08:05 HITS.pool.root.1
[2025-12-18 08:06:57] -rw------- 1 boincer umatlas   2058240 Dec 18 08:06 result.tar.gz
08:06:58 (27258): run_atlas exited; CPU time 87363.101440
08:06:58 (27258): called boinc_finish(0)

</stderr_txt>
]]>

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