Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:04:48 (2415855): wrapper (7.7.26015): starting
20:04:48 (2415855): wrapper: running run_atlas (--nthreads 3)
[2025-12-18 20:04:48] Arguments: --nthreads 3
[2025-12-18 20:04:48] Threads: 3
[2025-12-18 20:04:48] Checking for CVMFS
[2025-12-18 20:04:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 20:04:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 20:04:48] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 20:04:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 20:04:48] 2.9.2.0 415797 7487 84416 154161 1 56 20916073 36864001 0 130560 0 5175119 99.990 270372 17733 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 20:04:48] CVMFS is ok
[2025-12-18 20:04:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 20:04:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 20:04:48] Further information can be found at the LHC@home message board.
[2025-12-18 20:04:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 20:04:48] Checking for apptainer binary...
[2025-12-18 20:04:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 20:04:48] Running /usr/bin/apptainer --version
[2025-12-18 20:04:48] apptainer version 1.4.1-1.1
[2025-12-18 20:04:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 20:04:48] magicA246a
[2025-12-18 20:04:48] apptainer works
[2025-12-18 20:04:48] Set ATHENA_PROC_NUMBER=3
[2025-12-18 20:04:48] Set ATHENA_CORE_NUMBER=3
[2025-12-18 20:04:48] Starting ATLAS job with PandaID=6932673913
[2025-12-18 20:04:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 21:30:05]  *** The last 200 lines of the pilot log: ***
[2025-12-18 21:30:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 21:30:05] 
[2025-12-18 21:30:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 21:30:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 21:30:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 21:30:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 21:30:05] 
[2025-12-18 21:30:05] 2025-12-18 20:28:59,572 | INFO     | ***************************************
[2025-12-18 21:30:05] 2025-12-18 20:29:00,075 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-18 21:30:05] 2025-12-18 20:29:00,086 | INFO     | sufficient remaining disk space (284019392512 B)
[2025-12-18 21:30:05] 2025-12-18 20:29:00,087 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 21:30:05] 2025-12-18 20:29:00,087 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 21:30:05] 2025-12-18 20:29:00,087 | INFO     | update_server=False
[2025-12-18 21:30:05] 2025-12-18 20:29:00,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 21:30:05] 2025-12-18 20:29:00,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 21:30:05] 2025-12-18 20:29:00,171 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-18 21:30:05] 2025-12-18 20:29:00,171 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-18 21:30:05] 2025-12-18 20:29:00,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 21:30:05] 2025-12-18 20:29:00,172 | INFO     | will abort loop
[2025-12-18 21:30:05] 2025-12-18 20:29:00,200 | INFO     | all job control threads have been joined
[2025-12-18 21:30:05] 2025-12-18 20:29:00,279 | INFO     | all payload control threads have been joined
[2025-12-18 21:30:05] 2025-12-18 20:29:00,317 | INFO     | all data control threads have been joined
[2025-12-18 21:30:05] 2025-12-18 20:29:01,091 | INFO     | [job] queue monitor thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:01,092 | INFO     | [job] retrieve thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:01,177 | INFO     | [job] job monitor thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:01,205 | INFO     | [job] control thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:01,259 | INFO     | [payload] validate_post thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:01,284 | INFO     | [payload] control thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:01,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 21:30:05] 2025-12-18 20:29:01,323 | INFO     | [data] control thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:01,372 | INFO     | [payload] failed_post thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:01,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 21:30:05] 2025-12-18 20:29:02,104 | INFO     | [data] copytool_in thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:02,232 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:02,506 | INFO     | [job] validate thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:02,573 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:02,573 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:03,574 | INFO     | [data] copytool_out thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:05,308 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:10,711 | INFO     | job.realtimelogging is not enabled
[2025-12-18 21:30:05] 2025-12-18 20:29:11,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 21:30:05] 2025-12-18 20:29:29,993 | INFO     | PID=2419583 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 21:30:05] 2025-12-18 20:29:29,993 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 21:30:05] 2025-12-18 20:29:29,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 21:30:05] 2025-12-18 20:29:29,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 21:30:05] 2025-12-18 20:29:59,366 | INFO     | [monitor] cgroup control has ended
[2025-12-18 21:30:05] 2025-12-18 20:30:00,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644618798912)>', '<ExcThread(monitor, started 140643988920064)>']
[2025-12-18 21:30:05] 2025-12-18 20:30:01,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 21:30:05] 2025-12-18 20:30:01,147 | INFO     | [monitor] control thread has ended
[2025-12-18 21:30:05] 2025-12-18 20:30:05,407 | INFO     | all workflow threads have been joined
[2025-12-18 21:30:05] 2025-12-18 20:30:05,407 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 21:30:05] 2025-12-18 20:30:05,407 | INFO     | traces error code: 0
[2025-12-18 21:30:05] 2025-12-18 20:30:05,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 21:30:05] 2025-12-18 20:30:05,462 [wrapper] ==== pilot stdout END ====
[2025-12-18 21:30:05] 2025-12-18 20:30:05,464 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 21:30:05] 2025-12-18 20:30:05,466 [wrapper] pilotpid: 2419583
[2025-12-18 21:30:05] 2025-12-18 20:30:05,469 [wrapper] Pilot exit status: 0
[2025-12-18 21:30:05] 2025-12-18 20:30:05,476 [wrapper] pandaids: 6932673913
[2025-12-18 21:30:05] 2025-12-18 20:30:05,496 [wrapper] cleanup supervisor_pilot 2438833 2419584
[2025-12-18 21:30:05] 2025-12-18 20:30:05,498 [wrapper] Test setup, not cleaning
[2025-12-18 21:30:05] 2025-12-18 20:30:05,501 [wrapper] apfmon messages muted
[2025-12-18 21:30:05] 2025-12-18 20:30:05,503 [wrapper] ==== wrapper stdout END ====
[2025-12-18 21:30:05] 2025-12-18 20:30:05,505 [wrapper] ==== wrapper stderr END ====
[2025-12-18 21:30:05]  *** Error codes and diagnostics ***
[2025-12-18 21:30:05]     "exeErrorCode": 0,
[2025-12-18 21:30:05]     "exeErrorDiag": "",
[2025-12-18 21:30:05]     "pilotErrorCode": 0,
[2025-12-18 21:30:05]     "pilotErrorDiag": "",
[2025-12-18 21:30:05]  *** Listing of results directory ***
[2025-12-18 21:30:05] total 338744
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc    579449 Dec 17 23:04 pilot3.tar.gz
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc      5112 Dec 17 23:05 queuedata.json
[2025-12-18 21:30:05] -rwx------ 1 boinc boinc     36322 Dec 17 23:05 runpilot2-wrapper.sh
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc       100 Dec 18 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 21:30:05] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 20:04 run_atlas
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc       105 Dec 18 20:04 job.xml
[2025-12-18 21:30:05] -rw-r--r-- 2 boinc boinc 193259326 Dec 18 20:04 EVNT.47886929._000559.pool.root.1
[2025-12-18 21:30:05] -rw-r--r-- 2 boinc boinc    592395 Dec 18 20:04 input.tar.gz
[2025-12-18 21:30:05] -rw-r--r-- 2 boinc boinc     15847 Dec 18 20:04 start_atlas.sh
[2025-12-18 21:30:05] drwxrwx--x 2 boinc boinc      4096 Dec 18 20:04 shared
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc         0 Dec 18 20:04 boinc_setup_complete
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc      6447 Dec 18 20:04 init_data.xml
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc         0 Dec 18 20:04 boinc_lockfile
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc      2515 Dec 18 20:04 pandaJob.out
[2025-12-18 21:30:05] -rw------- 1 boinc boinc    988872 Dec 18 20:04 agis_schedconf.cvmfs.json
[2025-12-18 21:30:05] -rw------- 1 boinc boinc   1516240 Dec 18 20:04 agis_ddmendpoints.agis.ALL.json
[2025-12-18 21:30:05] drwx------ 5 boinc boinc      4096 Dec 18 20:04 pilot3
[2025-12-18 21:30:05] -rw------- 1 boinc boinc 147721904 Dec 18 21:28 HITS.47886933._011420.pool.root.1
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc       529 Dec 18 21:28 boinc_task_state.xml
[2025-12-18 21:30:05] -rw------- 1 boinc boinc      1024 Dec 18 21:28 memory_monitor_summary.json
[2025-12-18 21:30:05] -rw------- 1 boinc boinc    255366 Dec 18 21:28 log.47886933._011420.job.log.tgz.1
[2025-12-18 21:30:05] -rw------- 1 boinc boinc      7757 Dec 18 21:28 heartbeat.json
[2025-12-18 21:30:05] -rw------- 1 boinc boinc        95 Dec 18 21:29 pilot_heartbeat.json
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc      8192 Dec 18 21:29 boinc_mmap_file
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc        27 Dec 18 21:29 wrapper_checkpoint.txt
[2025-12-18 21:30:05] -rw------- 1 boinc boinc      5010 Dec 18 21:30 pilotlog.txt
[2025-12-18 21:30:05] -rw------- 1 boinc boinc    739515 Dec 18 21:30 log.47886933._011420.job.log.1
[2025-12-18 21:30:05] -rw------- 1 boinc boinc       357 Dec 18 21:30 output.list
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc       620 Dec 18 21:30 runtime_log
[2025-12-18 21:30:05] -rw------- 1 boinc boinc   1013760 Dec 18 21:30 result.tar.gz
[2025-12-18 21:30:05] -rw------- 1 boinc boinc       662 Dec 18 21:30 vIINDmKpEq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCncKDmIefIcm.diag
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc      8917 Dec 18 21:30 runtime_log.err
[2025-12-18 21:30:05] -rw-r--r-- 1 boinc boinc      8626 Dec 18 21:30 stderr.txt
[2025-12-18 21:30:05] HITS file was successfully produced:
[2025-12-18 21:30:05] -rw------- 1 boinc boinc 147721904 Dec 18 21:28 shared/HITS.pool.root.1
[2025-12-18 21:30:05]  *** Contents of shared directory: ***
[2025-12-18 21:30:05] total 334588
[2025-12-18 21:30:05] -rw-r--r-- 2 boinc boinc 193259326 Dec 18 20:04 ATLAS.root_0
[2025-12-18 21:30:05] -rw-r--r-- 2 boinc boinc    592395 Dec 18 20:04 input.tar.gz
[2025-12-18 21:30:05] -rw-r--r-- 2 boinc boinc     15847 Dec 18 20:04 start_atlas.sh
[2025-12-18 21:30:05] -rw------- 1 boinc boinc 147721904 Dec 18 21:28 HITS.pool.root.1
[2025-12-18 21:30:05] -rw------- 1 boinc boinc   1013760 Dec 18 21:30 result.tar.gz
21:30:07 (2415855): run_atlas exited; CPU time 14459.469566
21:30:07 (2415855): called boinc_finish(0)

</stderr_txt>
]]>

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