Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:11:58 (1257027): wrapper (7.7.26015): starting
20:11:58 (1257027): wrapper: running run_atlas (--nthreads 3)
[2025-12-18 20:11:58] Arguments: --nthreads 3
[2025-12-18 20:11:58] Threads: 3
[2025-12-18 20:11:58] Checking for CVMFS
[2025-12-18 20:11:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 20:11:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 20:11:59] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 20:12:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 20:12:00] 2.13.3.0 1229690 126 51564 154148 3 9 28426692 31457280 0 130560 0 84259 99.965 11037 27 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-12-18 20:12:00] CVMFS is ok
[2025-12-18 20:12:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 20:12:00] Checking for apptainer binary...
[2025-12-18 20:12:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 20:12:00] Running /usr/bin/apptainer --version
[2025-12-18 20:12:00] apptainer version 1.4.4-1.el9
[2025-12-18 20:12:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 20:12:00] testio001
[2025-12-18 20:12:00] apptainer works
[2025-12-18 20:12:00] Set ATHENA_PROC_NUMBER=3
[2025-12-18 20:12:00] Set ATHENA_CORE_NUMBER=3
[2025-12-18 20:12:00] Starting ATLAS job with PandaID=6933048993
[2025-12-18 20:12:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 22:15:48]  *** The last 200 lines of the pilot log: ***
[2025-12-18 22:15:48] 2025-12-18 13:14:46,987 | INFO     | monitor loop #564: job 0:6933048993 is in state 'finished'
[2025-12-18 22:15:48] 2025-12-18 13:14:46,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 22:15:48] 2025-12-18 13:14:48,938 | INFO     | time since job start (7339s) is within the limit (174528.0s)
[2025-12-18 22:15:48] 2025-12-18 13:14:49,490 | INFO     | monitor loop #565: job 0:6933048993 is in state 'finished'
[2025-12-18 22:15:48] 2025-12-18 13:14:49,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 22:15:48] 2025-12-18 13:14:50,943 | INFO     | time since job start (7341s) is within the limit (174528.0s)
[2025-12-18 22:15:48] 2025-12-18 13:14:50,943 | INFO     | 7349s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-18 22:15:48] 2025-12-18 13:14:51,992 | INFO     | monitor loop #566: job 0:6933048993 is in state 'finished'
[2025-12-18 22:15:48] 2025-12-18 13:14:51,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 22:15:48] 2025-12-18 13:14:52,949 | INFO     | time since job start (7343s) is within the limit (174528.0s)
[2025-12-18 22:15:48] 2025-12-18 13:14:53,563 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-18 22:15:48] 2025-12-18 13:14:53,563 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3667.156
[2025-12-18 22:15:48] 2025-12-18 13:14:53,564 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6933048993/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 22:15:48] 2025-12-18 13:14:53,564 | INFO     | extracted standard info from prmon json
[2025-12-18 22:15:48] 2025-12-18 13:14:53,564 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 22:15:48] 2025-12-18 13:14:53,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 22:15:48] 2025-12-18 13:14:53,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 22:15:48] 2025-12-18 13:14:53,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 22:15:48] 2025-12-18 13:14:53,566 | INFO     | fitting pss+swap vs Time
[2025-12-18 22:15:48] 2025-12-18 13:14:53,566 | INFO     | sum of square deviations: 522651097.6974787
[2025-12-18 22:15:48] 2025-12-18 13:14:53,566 | INFO     | sum of deviations: 6680125153.495802
[2025-12-18 22:15:48] 2025-12-18 13:14:53,566 | INFO     | mean x: 1766059972.4789915
[2025-12-18 22:15:48] 2025-12-18 13:14:53,566 | INFO     | mean y: 2396186.7983193276
[2025-12-18 22:15:48] 2025-12-18 13:14:53,566 | INFO     | intersect: -22570026786.60114
[2025-12-18 22:15:48] 2025-12-18 13:14:53,567 | INFO     | chi2: 2.740098086633405
[2025-12-18 22:15:48] 2025-12-18 13:14:53,567 | INFO     | sum of square deviations: 459532414.0
[2025-12-18 22:15:48] 2025-12-18 13:14:53,567 | INFO     | sum of deviations: 14694091543.999994
[2025-12-18 22:15:48] 2025-12-18 13:14:53,567 | INFO     | mean x: 1766059820.0
[2025-12-18 22:15:48] 2025-12-18 13:14:53,567 | INFO     | mean y: 2414991.701754386
[2025-12-18 22:15:48] 2025-12-18 13:14:53,567 | INFO     | intersect: -56469433079.62962
[2025-12-18 22:15:48] 2025-12-18 13:14:53,567 | INFO     | chi2: 2.075404066068561
[2025-12-18 22:15:48] 2025-12-18 13:14:53,567 | INFO     | current chi2=2.075404066068561 (change=24.25803746980145 %)
[2025-12-18 22:15:48] 2025-12-18 13:14:53,567 | INFO     | right removable region: 113
[2025-12-18 22:15:48] 2025-12-18 13:14:53,567 | INFO     | sum of square deviations: 459540435.6842106
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | sum of deviations: -17394758166.0
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | mean x: 1766060124.9473684
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | mean y: 2453874.1666666665
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | intersect: 66852259450.76597
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | chi2: 0.7449627356091189
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | current chi2=0.7449627356091189 (change=72.81255224974774 %)
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | sum of square deviations: 401691237.1376139
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | sum of deviations: -17554485026.091747
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | mean x: 1766060277.46789
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | mean y: 2454245.6880733944
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | intersect: 77181829421.76283
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | chi2: 0.7316513545439678
[2025-12-18 22:15:48] 2025-12-18 13:14:53,568 | INFO     | current chi2=0.7316513545439678 (change=1.7868519361934274 %)
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | left removable region: 20
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | sum of square deviations: 249534541.03225756
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | sum of deviations: -8077321026.709676
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | mean x: 1766060399.548387
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | mean y: 2476281.935483871
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | intersect: 57169058273.7545
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | chi2: 0.040621392472494695
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | current memory leak: -32.37 B/s (using 93 data points, chi2=0.04)
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | could have reported an average CPU frequency of 3619 MHz (7 samples)
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | ..............................
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | . Timing measurements:
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | . get job = 0 s
[2025-12-18 22:15:48] 2025-12-18 13:14:53,569 | INFO     | . initial setup = 7 s
[2025-12-18 22:15:48] 2025-12-18 13:14:53,570 | INFO     | . payload setup = 4 s
[2025-12-18 22:15:48] 2025-12-18 13:14:53,570 | INFO     | . stage-in = 0 s
[2025-12-18 22:15:48] 2025-12-18 13:14:53,570 | INFO     | . payload execution = 7216 s
[2025-12-18 22:15:48] 2025-12-18 13:14:53,570 | INFO     | . stage-out = 0 s
[2025-12-18 22:15:48] 2025-12-18 13:14:53,570 | INFO     | . log creation = 0 s
[2025-12-18 22:15:48] 2025-12-18 13:14:53,570 | INFO     | ..............................
[2025-12-18 22:15:48] 2025-12-18 13:14:54,005 | INFO     | 
[2025-12-18 22:15:48] 2025-12-18 13:14:54,005 | INFO     | job summary report
[2025-12-18 22:15:48] 2025-12-18 13:14:54,005 | INFO     | --------------------------------------------------
[2025-12-18 22:15:48] 2025-12-18 13:14:54,005 | INFO     | PanDA job id: 6933048993
[2025-12-18 22:15:48] 2025-12-18 13:14:54,005 | INFO     | task id: 47929408
[2025-12-18 22:15:48] 2025-12-18 13:14:54,005 | INFO     | errors: (none)
[2025-12-18 22:15:48] 2025-12-18 13:14:54,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 22:15:48] 2025-12-18 13:14:54,005 | INFO     | pilot state: finished 
[2025-12-18 22:15:48] 2025-12-18 13:14:54,005 | INFO     | transexitcode: 0
[2025-12-18 22:15:48] 2025-12-18 13:14:54,005 | INFO     | exeerrorcode: 0
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | exeerrordiag: 
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | exitcode: 0
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | exitmsg: OK
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | cpuconsumptiontime: 19077 s
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | nevents: 400
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | neventsw: 0
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | pid: 1267229
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | pgrp: 1267229
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | corecount: 3
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | event service: False
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | sizes: {0: 2284037, 3: 2284299, 11: 2284327, 7225: 2320634, 7229: 2320634, 7331: 2320828}
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | --------------------------------------------------
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | 
[2025-12-18 22:15:48] 2025-12-18 13:14:54,006 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-12-18 22:15:48] 2025-12-18 13:14:54,017 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,017 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,017 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,017 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,017 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | job 6933048993 has completed (purged errors)
[2025-12-18 22:15:48] 2025-12-18 13:14:54,018 | INFO     | overall cleanup function is called
[2025-12-18 22:15:48] 2025-12-18 13:14:55,024 | INFO     | --- collectZombieJob: --- 10, [1267229]
[2025-12-18 22:15:48] 2025-12-18 13:14:55,024 | INFO     | zombie collector waiting for pid 1267229
[2025-12-18 22:15:48] 2025-12-18 13:14:55,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 22:15:48] 2025-12-18 13:14:55,024 | INFO     | collected zombie processes
[2025-12-18 22:15:48] 2025-12-18 13:14:55,025 | INFO     | will attempt to kill all subprocesses of pid=1267229
[2025-12-18 22:15:48] 2025-12-18 13:14:55,056 | INFO     | process IDs to be killed: [1267229] (in reverse order)
[2025-12-18 22:15:48] 2025-12-18 13:14:55,076 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 22:15:48] 2025-12-18 13:14:55,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 22:15:48] 2025-12-18 13:14:55,077 | INFO     | did not find any defunct processes belonging to 1267229
[2025-12-18 22:15:48] 2025-12-18 13:14:55,078 | INFO     | did not find any defunct processes belonging to 1267229
[2025-12-18 22:15:48] 2025-12-18 13:14:55,078 | INFO     | ready for new job
[2025-12-18 22:15:48] 2025-12-18 13:14:55,078 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 22:15:48] 2025-12-18 13:14:55,079 | INFO     | ***************************************
[2025-12-18 22:15:48] 2025-12-18 13:14:55,080 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 22:15:48] 2025-12-18 13:14:55,080 | INFO     | ***************************************
[2025-12-18 22:15:48] 2025-12-18 13:14:55,080 | INFO     | 
[2025-12-18 22:15:48] 2025-12-18 13:14:55,080 | INFO     | architecture information:
[2025-12-18 22:15:48] 2025-12-18 13:14:55,080 | INFO     | executing command: cat /etc/os-release
[2025-12-18 22:15:48] 2025-12-18 13:14:55,088 | INFO     | cat /etc/os-release:
[2025-12-18 22:15:48] NAME="CentOS Linux"
[2025-12-18 22:15:48] VERSION="7 (Core)"
[2025-12-18 22:15:48] ID="centos"
[2025-12-18 22:15:48] ID_LIKE="rhel fedora"
[2025-12-18 22:15:48] VERSION_ID="7"
[2025-12-18 22:15:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 22:15:48] ANSI_COLOR="0;31"
[2025-12-18 22:15:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 22:15:48] HOME_URL="https://www.centos.org/"
[2025-12-18 22:15:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 22:15:48] 
[2025-12-18 22:15:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 22:15:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 22:15:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 22:15:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 22:15:48] 
[2025-12-18 22:15:48] 2025-12-18 13:14:55,088 | INFO     | ***************************************
[2025-12-18 22:15:48] 2025-12-18 13:14:55,590 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-12-18 22:15:48] 2025-12-18 13:14:55,598 | INFO     | sufficient remaining disk space (114386010112 B)
[2025-12-18 22:15:48] 2025-12-18 13:14:55,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 22:15:48] 2025-12-18 13:14:55,599 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 22:15:48] 2025-12-18 13:14:55,599 | INFO     | update_server=False
[2025-12-18 22:15:48] 2025-12-18 13:14:55,599 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 22:15:48] 2025-12-18 13:14:55,599 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 22:15:48] 2025-12-18 13:14:55,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 22:15:48] 2025-12-18 13:14:55,599 | INFO     | aborting loop
[2025-12-18 22:15:48] 2025-12-18 13:14:55,972 | INFO     | all job control threads have been joined
[2025-12-18 22:15:48] 2025-12-18 13:14:56,237 | INFO     | all data control threads have been joined
[2025-12-18 22:15:48] 2025-12-18 13:14:56,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 22:15:48] 2025-12-18 13:14:56,603 | INFO     | [job] retrieve thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:56,604 | INFO     | [job] queue monitor thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:56,604 | INFO     | [job] job monitor thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:56,612 | INFO     | [payload] failed_post thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:56,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 22:15:48] 2025-12-18 13:14:56,842 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:56,859 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:56,861 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:56,953 | INFO     | all payload control threads have been joined
[2025-12-18 22:15:48] 2025-12-18 13:14:56,977 | INFO     | [job] control thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:56,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:57,242 | INFO     | [data] control thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:57,427 | INFO     | [job] validate thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:57,522 | INFO     | [data] copytool_in thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:57,728 | INFO     | [payload] validate_post thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:57,958 | INFO     | [payload] control thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:14:58,302 | INFO     | [data] copytool_out thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:15:00,735 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 22:15:48] 2025-12-18 13:15:26,043 | INFO     | PID=1260698 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 22:15:48] 2025-12-18 13:15:26,043 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 22:15:48] 2025-12-18 13:15:26,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 22:15:48] 2025-12-18 13:15:26,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 22:15:48] 2025-12-18 13:15:41,841 | INFO     | [monitor] cgroup control has ended
[2025-12-18 22:15:48] 2025-12-18 13:15:43,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711672670016)>', '<ExcThread(monitor, started 140711290717952)>']
[2025-12-18 22:15:48] 2025-12-18 13:15:44,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 22:15:48] 2025-12-18 13:15:44,129 | INFO     | [monitor] control thread has ended
[2025-12-18 22:15:48] 2025-12-18 13:15:48,776 | INFO     | all workflow threads have been joined
[2025-12-18 22:15:48] 2025-12-18 13:15:48,776 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 22:15:48] 2025-12-18 13:15:48,776 | INFO     | traces error code: 0
[2025-12-18 22:15:48] 2025-12-18 13:15:48,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 22:15:48] 2025-12-18 13:15:48,838 [wrapper] ==== pilot stdout END ====
[2025-12-18 22:15:48] 2025-12-18 13:15:48,839 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 22:15:48] 2025-12-18 13:15:48,840 [wrapper] pilotpid: 1260698
[2025-12-18 22:15:48] 2025-12-18 13:15:48,842 [wrapper] Pilot exit status: 0
[2025-12-18 22:15:48] 2025-12-18 13:15:48,847 [wrapper] pandaids: 6933048993
[2025-12-18 22:15:48] 2025-12-18 13:15:48,858 [wrapper] cleanup supervisor_pilot 1281458 1260699
[2025-12-18 22:15:48] 2025-12-18 13:15:48,860 [wrapper] Test setup, not cleaning
[2025-12-18 22:15:48] 2025-12-18 13:15:48,861 [wrapper] apfmon messages muted
[2025-12-18 22:15:48] 2025-12-18 13:15:48,863 [wrapper] ==== wrapper stdout END ====
[2025-12-18 22:15:48] 2025-12-18 13:15:48,864 [wrapper] ==== wrapper stderr END ====
[2025-12-18 22:15:48]  *** Error codes and diagnostics ***
[2025-12-18 22:15:48]     "exeErrorCode": 0,
[2025-12-18 22:15:48]     "exeErrorDiag": "",
[2025-12-18 22:15:48]     "pilotErrorCode": 0,
[2025-12-18 22:15:48]     "pilotErrorDiag": "",
[2025-12-18 22:15:48]  *** Listing of results directory ***
[2025-12-18 22:15:48] total 434588
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc    579449 Dec 18 12:11 pilot3.tar.gz
[2025-12-18 22:15:48] -rwx------. 1 boinc boinc     36322 Dec 18 12:15 runpilot2-wrapper.sh
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc      5112 Dec 18 12:15 queuedata.json
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc       100 Dec 18 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 22:15:48] -rwxr-xr-x. 1 boinc boinc      7986 Dec 18 20:11 run_atlas
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc       105 Dec 18 20:11 job.xml
[2025-12-18 22:15:48] -rw-r--r--. 2 boinc boinc     15847 Dec 18 20:11 start_atlas.sh
[2025-12-18 22:15:48] drwxrwx--x. 2 boinc boinc        68 Dec 18 20:11 shared
[2025-12-18 22:15:48] -rw-r--r--. 2 boinc boinc    592408 Dec 18 20:11 input.tar.gz
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc      9312 Dec 18 20:11 init_data.xml
[2025-12-18 22:15:48] -rw-r--r--. 2 boinc boinc 255976085 Dec 18 20:11 EVNT.47929406._000008.pool.root.1
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc         0 Dec 18 20:11 boinc_lockfile
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc      2573 Dec 18 20:12 pandaJob.out
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc    988141 Dec 18 20:12 agis_schedconf.cvmfs.json
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc   1516240 Dec 18 20:12 agis_ddmendpoints.agis.ALL.json
[2025-12-18 22:15:48] drwx------. 5 boinc boinc      4096 Dec 18 20:12 pilot3
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc 182515982 Dec 18 22:12 HITS.47929408._000220.pool.root.1
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc      1017 Dec 18 22:13 memory_monitor_summary.json
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc    289304 Dec 18 22:13 log.47929408._000220.job.log.tgz.1
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc       529 Dec 18 22:13 boinc_task_state.xml
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc        95 Dec 18 22:14 pilot_heartbeat.json
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc      7765 Dec 18 22:14 heartbeat.json
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc      8192 Dec 18 22:15 boinc_mmap_file
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc        27 Dec 18 22:15 wrapper_checkpoint.txt
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc      4749 Dec 18 22:15 pilotlog.txt
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc   1022946 Dec 18 22:15 log.47929408._000220.job.log.1
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc       357 Dec 18 22:15 output.list
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc       620 Dec 18 22:15 runtime_log
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc   1331200 Dec 18 22:15 result.tar.gz
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc      8775 Dec 18 22:15 runtime_log.err
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc       643 Dec 18 22:15 h9KLDmDfJq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmENdKDmijl39m.diag
[2025-12-18 22:15:48] -rw-r--r--. 1 boinc boinc     21052 Dec 18 22:15 stderr.txt
[2025-12-18 22:15:48] HITS file was successfully produced:
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc 182515982 Dec 18 22:12 shared/HITS.pool.root.1
[2025-12-18 22:15:48]  *** Contents of shared directory: ***
[2025-12-18 22:15:48] total 430116
[2025-12-18 22:15:48] -rw-r--r--. 2 boinc boinc     15847 Dec 18 20:11 start_atlas.sh
[2025-12-18 22:15:48] -rw-r--r--. 2 boinc boinc    592408 Dec 18 20:11 input.tar.gz
[2025-12-18 22:15:48] -rw-r--r--. 2 boinc boinc 255976085 Dec 18 20:11 ATLAS.root_0
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc 182515982 Dec 18 22:12 HITS.pool.root.1
[2025-12-18 22:15:48] -rw-------. 1 boinc boinc   1331200 Dec 18 22:15 result.tar.gz
22:15:50 (1257027): run_atlas exited; CPU time 19103.763948
22:15:50 (1257027): called boinc_finish(0)

</stderr_txt>
]]>

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