Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:05:14 (1229471): wrapper (7.7.26015): starting
18:05:14 (1229471): wrapper: running run_atlas (--nthreads 3)
[2025-12-18 18:05:14] Arguments: --nthreads 3
[2025-12-18 18:05:14] Threads: 3
[2025-12-18 18:05:14] Checking for CVMFS
[2025-12-18 18:05:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 18:06:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 18:06:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 18:06:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 18:06:09] 2.13.3.0 1229690 0 29476 154142 3 1 28395104 31457280 0 130560 0 0 0.000 1337 59 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-12-18 18:06:09] CVMFS is ok
[2025-12-18 18:06:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 18:06:09] Checking for apptainer binary...
[2025-12-18 18:06:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 18:06:09] Running /usr/bin/apptainer --version
[2025-12-18 18:06:09] apptainer version 1.4.4-1.el9
[2025-12-18 18:06:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 18:06:09] testio001
[2025-12-18 18:06:09] apptainer works
[2025-12-18 18:06:09] Set ATHENA_PROC_NUMBER=3
[2025-12-18 18:06:09] Set ATHENA_CORE_NUMBER=3
[2025-12-18 18:06:09] Starting ATLAS job with PandaID=6933049131
[2025-12-18 18:06:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 20:11:53]  *** The last 200 lines of the pilot log: ***
[2025-12-18 20:11:53] 2025-12-18 11:10:41,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 20:11:53] 2025-12-18 11:10:41,877 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 20:11:53] 2025-12-18 11:10:41,878 | INFO     | fitting pss+swap vs Time
[2025-12-18 20:11:53] 2025-12-18 11:10:41,878 | INFO     | sum of square deviations: 522502820.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,878 | INFO     | sum of deviations: 15333062602.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | mean x: 1766052509.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | mean y: 2317508.0336134452
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | intersect: -51823228005.60815
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | chi2: 1.7983877097559495
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | sum of square deviations: 459366752.5
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | sum of deviations: 14594585774.499998
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | mean x: 1766052356.5
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | mean y: 2315723.254385965
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | intersect: -56107105472.170715
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | chi2: 1.8022104265635446
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | current chi2=1.8022104265635446 (change=-0.212563552723223 %)
[2025-12-18 20:11:53] 2025-12-18 11:10:41,879 | INFO     | right removable region: 113
[2025-12-18 20:11:53] 2025-12-18 11:10:41,880 | INFO     | sum of square deviations: 459366752.5
[2025-12-18 20:11:53] 2025-12-18 11:10:41,880 | INFO     | sum of deviations: -4910508844.999998
[2025-12-18 20:11:53] 2025-12-18 11:10:41,880 | INFO     | mean x: 1766052661.5
[2025-12-18 20:11:53] 2025-12-18 11:10:41,880 | INFO     | mean y: 2365777.6315789474
[2025-12-18 20:11:53] 2025-12-18 11:10:41,880 | INFO     | intersect: 18881000698.062695
[2025-12-18 20:11:53] 2025-12-18 11:10:41,880 | INFO     | chi2: 0.09246555838510577
[2025-12-18 20:11:53] 2025-12-18 11:10:41,880 | INFO     | current chi2=0.09246555838510577 (change=94.8584191337888 %)
[2025-12-18 20:11:53] 2025-12-18 11:10:41,880 | INFO     | sum of square deviations: 401533110.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,880 | INFO     | sum of deviations: 780298702.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,880 | INFO     | mean x: 1766052814.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | mean y: 2350719.137614679
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | intersect: -3429617116.4106107
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | chi2: 0.0016699231605470275
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | current chi2=0.0016699231605470275 (change=98.19400521695653 %)
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | sum of square deviations: 348769330.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | sum of deviations: 260665352.4999999
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | mean x: 1766052966.5
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | mean y: 2352214.028846154
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | intersect: -1317571240.9561234
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | chi2: 0.0009119831966606705
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | current chi2=0.0009119831966606705 (change=45.38771494360697 %)
[2025-12-18 20:11:53] 2025-12-18 11:10:41,881 | INFO     | sum of square deviations: 300842850.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | sum of deviations: 64239770.999999896
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | mean x: 1766053119.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | mean y: 2352830.9595959596
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | intersect: -374757171.6161527
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | chi2: 0.0007562988397210247
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | current chi2=0.0007562988397210247 (change=17.070967700907396 %)
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | left removable region: 40
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | sum of square deviations: 120605052.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | sum of deviations: -215887173.99999997
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | mean x: 1766053546.0
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | mean y: 2353253.698630137
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | intersect: 3163649591.2568526
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | chi2: 0.0004818766409014518
[2025-12-18 20:11:53] 2025-12-18 11:10:41,882 | INFO     | current memory leak: -1.79 B/s (using 73 data points, chi2=0.00)
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | could have reported an average CPU frequency of 3618 MHz (7 samples)
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | ..............................
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | . Timing measurements:
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | . get job = 0 s
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | . initial setup = 7 s
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | . payload setup = 4 s
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | . stage-in = 0 s
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | . payload execution = 7249 s
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | . stage-out = 0 s
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | . log creation = 0 s
[2025-12-18 20:11:53] 2025-12-18 11:10:41,883 | INFO     | ..............................
[2025-12-18 20:11:53] 2025-12-18 11:10:41,921 | INFO     | time since job start (7354s) is within the limit (174528.0s)
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | 
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | job summary report
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | --------------------------------------------------
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | PanDA job id: 6933049131
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | task id: 47929408
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | errors: (none)
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | pilot state: finished 
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | transexitcode: 0
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | exeerrorcode: 0
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | exeerrordiag: 
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | exitcode: 0
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | exitmsg: OK
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | cpuconsumptiontime: 19259 s
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | nevents: 400
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | neventsw: 0
[2025-12-18 20:11:53] 2025-12-18 11:10:42,248 | INFO     | pid: 1240295
[2025-12-18 20:11:53] 2025-12-18 11:10:42,249 | INFO     | pgrp: 1240295
[2025-12-18 20:11:53] 2025-12-18 11:10:42,249 | INFO     | corecount: 3
[2025-12-18 20:11:53] 2025-12-18 11:10:42,249 | INFO     | event service: False
[2025-12-18 20:11:53] 2025-12-18 11:10:42,249 | INFO     | sizes: {0: 2283812, 1: 2284067, 4: 2284329, 11: 2284357, 7257: 2311695, 7259: 2320693, 7262: 2320877, 7341: 2321071}
[2025-12-18 20:11:53] 2025-12-18 11:10:42,249 | INFO     | --------------------------------------------------
[2025-12-18 20:11:53] 2025-12-18 11:10:42,249 | INFO     | 
[2025-12-18 20:11:53] 2025-12-18 11:10:42,249 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-12-18 20:11:53] 2025-12-18 11:10:42,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,262 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,262 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,262 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,262 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | job 6933049131 has completed (purged errors)
[2025-12-18 20:11:53] 2025-12-18 11:10:42,263 | INFO     | overall cleanup function is called
[2025-12-18 20:11:53] 2025-12-18 11:10:43,269 | INFO     | --- collectZombieJob: --- 10, [1240295]
[2025-12-18 20:11:53] 2025-12-18 11:10:43,269 | INFO     | zombie collector waiting for pid 1240295
[2025-12-18 20:11:53] 2025-12-18 11:10:43,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 20:11:53] 2025-12-18 11:10:43,270 | INFO     | collected zombie processes
[2025-12-18 20:11:53] 2025-12-18 11:10:43,270 | INFO     | will attempt to kill all subprocesses of pid=1240295
[2025-12-18 20:11:53] 2025-12-18 11:10:43,302 | INFO     | process IDs to be killed: [1240295] (in reverse order)
[2025-12-18 20:11:53] 2025-12-18 11:10:43,320 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 20:11:53] 2025-12-18 11:10:43,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 20:11:53] 2025-12-18 11:10:43,322 | INFO     | did not find any defunct processes belonging to 1240295
[2025-12-18 20:11:53] 2025-12-18 11:10:43,323 | INFO     | did not find any defunct processes belonging to 1240295
[2025-12-18 20:11:53] 2025-12-18 11:10:43,323 | INFO     | ready for new job
[2025-12-18 20:11:53] 2025-12-18 11:10:43,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 20:11:53] 2025-12-18 11:10:43,324 | INFO     | ***************************************
[2025-12-18 20:11:53] 2025-12-18 11:10:43,324 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 20:11:53] 2025-12-18 11:10:43,324 | INFO     | ***************************************
[2025-12-18 20:11:53] 2025-12-18 11:10:43,324 | INFO     | 
[2025-12-18 20:11:53] 2025-12-18 11:10:43,324 | INFO     | architecture information:
[2025-12-18 20:11:53] 2025-12-18 11:10:43,326 | INFO     | executing command: cat /etc/os-release
[2025-12-18 20:11:53] 2025-12-18 11:10:43,332 | INFO     | cat /etc/os-release:
[2025-12-18 20:11:53] NAME="CentOS Linux"
[2025-12-18 20:11:53] VERSION="7 (Core)"
[2025-12-18 20:11:53] ID="centos"
[2025-12-18 20:11:53] ID_LIKE="rhel fedora"
[2025-12-18 20:11:53] VERSION_ID="7"
[2025-12-18 20:11:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 20:11:53] ANSI_COLOR="0;31"
[2025-12-18 20:11:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 20:11:53] HOME_URL="https://www.centos.org/"
[2025-12-18 20:11:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 20:11:53] 
[2025-12-18 20:11:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 20:11:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 20:11:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 20:11:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 20:11:53] 
[2025-12-18 20:11:53] 2025-12-18 11:10:43,333 | INFO     | ***************************************
[2025-12-18 20:11:53] 2025-12-18 11:10:43,835 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-12-18 20:11:53] 2025-12-18 11:10:43,846 | INFO     | sufficient remaining disk space (114597822464 B)
[2025-12-18 20:11:53] 2025-12-18 11:10:43,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 20:11:53] 2025-12-18 11:10:43,847 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 20:11:53] 2025-12-18 11:10:43,847 | INFO     | update_server=False
[2025-12-18 20:11:53] 2025-12-18 11:10:43,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 20:11:53] 2025-12-18 11:10:43,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 20:11:53] 2025-12-18 11:10:43,847 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-18 20:11:53] 2025-12-18 11:10:43,847 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 20:11:53] 2025-12-18 11:10:43,847 | INFO     | aborting loop
[2025-12-18 20:11:53] 2025-12-18 11:10:43,847 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 20:11:53] 2025-12-18 11:10:43,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 20:11:53] 2025-12-18 11:10:43,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 20:11:53] 2025-12-18 11:10:44,851 | INFO     | [job] retrieve thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:44,852 | INFO     | [job] queue monitor thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:44,853 | INFO     | [job] job monitor thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:44,907 | INFO     | all data control threads have been joined
[2025-12-18 20:11:53] 2025-12-18 11:10:45,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 20:11:53] 2025-12-18 11:10:45,069 | INFO     | [payload] failed_post thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:45,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 20:11:53] 2025-12-18 11:10:45,250 | INFO     | all job control threads have been joined
[2025-12-18 20:11:53] 2025-12-18 11:10:45,280 | INFO     | [job] validate thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:45,316 | INFO     | all payload control threads have been joined
[2025-12-18 20:11:53] 2025-12-18 11:10:45,537 | INFO     | [data] copytool_in thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:45,729 | INFO     | [payload] validate_post thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:45,883 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:45,912 | INFO     | [data] control thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:45,970 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:46,253 | INFO     | [job] control thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:46,275 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:46,321 | INFO     | [payload] control thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:47,073 | INFO     | [data] copytool_out thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:49,237 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:10:54,152 | INFO     | job.realtimelogging is not enabled
[2025-12-18 20:11:53] 2025-12-18 11:10:55,157 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 20:11:53] 2025-12-18 11:11:19,572 | INFO     | [monitor] cgroup control has ended
[2025-12-18 20:11:53] 2025-12-18 11:11:20,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883011467072)>', '<ExcThread(monitor, started 139882638857984)>']
[2025-12-18 20:11:53] 2025-12-18 11:11:20,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 20:11:53] 2025-12-18 11:11:20,022 | INFO     | [monitor] control thread has ended
[2025-12-18 20:11:53] 2025-12-18 11:11:25,034 | INFO     | all workflow threads have been joined
[2025-12-18 20:11:53] 2025-12-18 11:11:25,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 20:11:53] 2025-12-18 11:11:25,034 | INFO     | traces error code: 0
[2025-12-18 20:11:53] 2025-12-18 11:11:25,034 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 20:11:53] 2025-12-18 11:11:53,583 [wrapper] ==== pilot stdout END ====
[2025-12-18 20:11:53] 2025-12-18 11:11:53,584 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 20:11:53] 2025-12-18 11:11:53,586 [wrapper] pilotpid: 1233763
[2025-12-18 20:11:53] 2025-12-18 11:11:53,587 [wrapper] Pilot exit status: 0
[2025-12-18 20:11:53] 2025-12-18 11:11:53,593 [wrapper] pandaids: 6933049131
[2025-12-18 20:11:53] 2025-12-18 11:11:53,607 [wrapper] cleanup supervisor_pilot 1254501 1233764
[2025-12-18 20:11:53] 2025-12-18 11:11:53,609 [wrapper] Test setup, not cleaning
[2025-12-18 20:11:53] 2025-12-18 11:11:53,610 [wrapper] apfmon messages muted
[2025-12-18 20:11:53] 2025-12-18 11:11:53,612 [wrapper] ==== wrapper stdout END ====
[2025-12-18 20:11:53] 2025-12-18 11:11:53,613 [wrapper] ==== wrapper stderr END ====
[2025-12-18 20:11:53]  *** Error codes and diagnostics ***
[2025-12-18 20:11:53]     "exeErrorCode": 0,
[2025-12-18 20:11:53]     "exeErrorDiag": "",
[2025-12-18 20:11:53]     "pilotErrorCode": 0,
[2025-12-18 20:11:53]     "pilotErrorDiag": "",
[2025-12-18 20:11:53]  *** Listing of results directory ***
[2025-12-18 20:11:53] total 431868
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc    579449 Dec 18 12:11 pilot3.tar.gz
[2025-12-18 20:11:53] -rwx------. 1 boinc boinc     36322 Dec 18 12:15 runpilot2-wrapper.sh
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc      5112 Dec 18 12:15 queuedata.json
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc       100 Dec 18 18:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 20:11:53] -rwxr-xr-x. 1 boinc boinc      7986 Dec 18 18:05 run_atlas
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc       105 Dec 18 18:05 job.xml
[2025-12-18 20:11:53] -rw-r--r--. 2 boinc boinc    592415 Dec 18 18:05 input.tar.gz
[2025-12-18 20:11:53] -rw-r--r--. 2 boinc boinc 253901479 Dec 18 18:05 EVNT.47929406._000014.pool.root.1
[2025-12-18 20:11:53] -rw-r--r--. 2 boinc boinc     15847 Dec 18 18:05 start_atlas.sh
[2025-12-18 20:11:53] drwxrwx--x. 2 boinc boinc        68 Dec 18 18:05 shared
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc         0 Dec 18 18:05 boinc_lockfile
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc      2574 Dec 18 18:06 pandaJob.out
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc    988125 Dec 18 18:08 agis_schedconf.cvmfs.json
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc   1516240 Dec 18 18:08 agis_ddmendpoints.agis.ALL.json
[2025-12-18 20:11:53] drwx------. 5 boinc boinc      4096 Dec 18 18:08 pilot3
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc 181807297 Dec 18 20:08 HITS.47929408._000339.pool.root.1
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc      9319 Dec 18 20:08 init_data.xml
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc       529 Dec 18 20:09 boinc_task_state.xml
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc      1015 Dec 18 20:09 memory_monitor_summary.json
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc    283554 Dec 18 20:09 log.47929408._000339.job.log.tgz.1
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc        95 Dec 18 20:09 pilot_heartbeat.json
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc      7758 Dec 18 20:10 heartbeat.json
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc      4625 Dec 18 20:11 pilotlog.txt
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc      8192 Dec 18 20:11 boinc_mmap_file
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc        27 Dec 18 20:11 wrapper_checkpoint.txt
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc   1025235 Dec 18 20:11 log.47929408._000339.job.log.1
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc       357 Dec 18 20:11 output.list
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc       620 Dec 18 20:11 runtime_log
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc   1331200 Dec 18 20:11 result.tar.gz
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc      8775 Dec 18 20:11 runtime_log.err
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc       643 Dec 18 20:11 0VRNDmLfJq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJhYKDmjitbvm.diag
[2025-12-18 20:11:53] -rw-r--r--. 1 boinc boinc     20532 Dec 18 20:11 stderr.txt
[2025-12-18 20:11:53] HITS file was successfully produced:
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc 181807297 Dec 18 20:08 shared/HITS.pool.root.1
[2025-12-18 20:11:53]  *** Contents of shared directory: ***
[2025-12-18 20:11:53] total 427396
[2025-12-18 20:11:53] -rw-r--r--. 2 boinc boinc    592415 Dec 18 18:05 input.tar.gz
[2025-12-18 20:11:53] -rw-r--r--. 2 boinc boinc 253901479 Dec 18 18:05 ATLAS.root_0
[2025-12-18 20:11:53] -rw-r--r--. 2 boinc boinc     15847 Dec 18 18:05 start_atlas.sh
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc 181807297 Dec 18 20:08 HITS.pool.root.1
[2025-12-18 20:11:53] -rw-------. 1 boinc boinc   1331200 Dec 18 20:11 result.tar.gz
20:11:55 (1229471): run_atlas exited; CPU time 19288.741457
20:11:55 (1229471): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN