Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:49:36 (32333): wrapper (7.7.26015): starting
02:49:36 (32333): wrapper: running run_atlas (--nthreads 8)
[2025-12-18 02:49:36] Arguments: --nthreads 8
[2025-12-18 02:49:36] Threads: 8
[2025-12-18 02:49:36] Checking for CVMFS
[2025-12-18 02:49:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 02:49:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 02:49:36] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 02:49:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 02:49:36] 2.11.2.0 18601 133267 141304 154139 1 59 10493318 18432001 1833 130560 0 94487520 99.985 4956220 31734 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-18 02:49:36] CVMFS is ok
[2025-12-18 02:49:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 02:49:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 02:49:36] Further information can be found at the LHC@home message board.
[2025-12-18 02:49:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 02:49:36] Checking for apptainer binary...
[2025-12-18 02:49:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 02:49:36] Running /usr/bin/apptainer --version
[2025-12-18 02:49:36] apptainer version 1.3.2-1.el7
[2025-12-18 02:49:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 02:49:37] c-206-13.aglt2.org
[2025-12-18 02:49:37] apptainer works
[2025-12-18 02:49:37] Set ATHENA_PROC_NUMBER=8
[2025-12-18 02:49:37] Set ATHENA_CORE_NUMBER=8
[2025-12-18 02:49:37] Starting ATLAS job with PandaID=6933048848
[2025-12-18 02:49:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 05:46:11]  *** The last 200 lines of the pilot log: ***
[2025-12-18 05:46:11] 2025-12-18 10:45:05,349 | INFO     | executing command: lscpu
[2025-12-18 05:46:11] 2025-12-18 10:45:05,367 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 05:46:11] 2025-12-18 10:45:05,727 | INFO     | monitor loop #764: job 0:6933048848 is in state 'finished'
[2025-12-18 05:46:11] 2025-12-18 10:45:05,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 05:46:11] 2025-12-18 10:45:07,104 | INFO     | time since job start (10520s) is within the limit (174528.0s)
[2025-12-18 05:46:11] 2025-12-18 10:45:08,230 | INFO     | monitor loop #765: job 0:6933048848 is in state 'finished'
[2025-12-18 05:46:11] 2025-12-18 10:45:08,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,109 | INFO     | time since job start (10522s) is within the limit (174528.0s)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,478 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-18 05:46:11] 2025-12-18 10:45:09,481 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2378.0833333333335
[2025-12-18 05:46:11] 2025-12-18 10:45:09,484 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6933048848/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,484 | INFO     | extracted standard info from prmon json
[2025-12-18 05:46:11] 2025-12-18 10:45:09,484 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 05:46:11] 2025-12-18 10:45:09,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 05:46:11] 2025-12-18 10:45:09,485 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 05:46:11] 2025-12-18 10:45:09,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 05:46:11] 2025-12-18 10:45:09,488 | INFO     | fitting pss+swap vs Time
[2025-12-18 05:46:11] 2025-12-18 10:45:09,488 | INFO     | sum of square deviations: 1577789583.0
[2025-12-18 05:46:11] 2025-12-18 10:45:09,489 | INFO     | sum of deviations: 6355246997.000001
[2025-12-18 05:46:11] 2025-12-18 10:45:09,489 | INFO     | mean x: 1766049427.5
[2025-12-18 05:46:11] 2025-12-18 10:45:09,489 | INFO     | mean y: 2523123.3139534886
[2025-12-18 05:46:11] 2025-12-18 10:45:09,489 | INFO     | intersect: -7111023855.06849
[2025-12-18 05:46:11] 2025-12-18 10:45:09,489 | INFO     | chi2: 1.4692752820034294
[2025-12-18 05:46:11] 2025-12-18 10:45:09,490 | INFO     | sum of square deviations: 1444149868.0
[2025-12-18 05:46:11] 2025-12-18 10:45:09,490 | INFO     | sum of deviations: 6189020106.000007
[2025-12-18 05:46:11] 2025-12-18 10:45:09,491 | INFO     | mean x: 1766049275.0
[2025-12-18 05:46:11] 2025-12-18 10:45:09,491 | INFO     | mean y: 2522933.5808383236
[2025-12-18 05:46:11] 2025-12-18 10:45:09,491 | INFO     | intersect: -7566022903.215744
[2025-12-18 05:46:11] 2025-12-18 10:45:09,491 | INFO     | chi2: 1.4700772572382066
[2025-12-18 05:46:11] 2025-12-18 10:45:09,491 | INFO     | current chi2=1.4700772572382066 (change=-0.05458304815988432 %)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,491 | INFO     | right removable region: 166
[2025-12-18 05:46:11] 2025-12-18 10:45:09,491 | INFO     | sum of square deviations: 1444149868.0
[2025-12-18 05:46:11] 2025-12-18 10:45:09,492 | INFO     | sum of deviations: -18213886665.999996
[2025-12-18 05:46:11] 2025-12-18 10:45:09,492 | INFO     | mean x: 1766049580.0
[2025-12-18 05:46:11] 2025-12-18 10:45:09,492 | INFO     | mean y: 2550775.916167665
[2025-12-18 05:46:11] 2025-12-18 10:45:09,493 | INFO     | intersect: 22276296464.931385
[2025-12-18 05:46:11] 2025-12-18 10:45:09,493 | INFO     | chi2: 0.12391562596146127
[2025-12-18 05:46:11] 2025-12-18 10:45:09,493 | INFO     | current chi2=0.12391562596146127 (change=91.56620767535841 %)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,493 | INFO     | sum of square deviations: 1318277740.5
[2025-12-18 05:46:11] 2025-12-18 10:45:09,494 | INFO     | sum of deviations: -13980654873.500002
[2025-12-18 05:46:11] 2025-12-18 10:45:09,494 | INFO     | mean x: 1766049732.5
[2025-12-18 05:46:11] 2025-12-18 10:45:09,494 | INFO     | mean y: 2545627.734567901
[2025-12-18 05:46:11] 2025-12-18 10:45:09,494 | INFO     | intersect: 18731930977.25493
[2025-12-18 05:46:11] 2025-12-18 10:45:09,495 | INFO     | chi2: 0.11438326387003153
[2025-12-18 05:46:11] 2025-12-18 10:45:09,495 | INFO     | current chi2=0.11438326387003153 (change=7.692623119536498 %)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,495 | INFO     | left removable region: 20
[2025-12-18 05:46:11] 2025-12-18 10:45:09,495 | INFO     | sum of square deviations: 964976232.5
[2025-12-18 05:46:11] 2025-12-18 10:45:09,496 | INFO     | sum of deviations: -2789036296.5
[2025-12-18 05:46:11] 2025-12-18 10:45:09,496 | INFO     | mean x: 1766049854.5
[2025-12-18 05:46:11] 2025-12-18 10:45:09,496 | INFO     | mean y: 2530806.1301369863
[2025-12-18 05:46:11] 2025-12-18 10:45:09,496 | INFO     | intersect: 5106881545.285823
[2025-12-18 05:46:11] 2025-12-18 10:45:09,496 | INFO     | chi2: 0.05543455405156836
[2025-12-18 05:46:11] 2025-12-18 10:45:09,496 | INFO     | current memory leak: -2.89 B/s (using 146 data points, chi2=0.06)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,497 | INFO     | could have reported an average CPU frequency of 2505 MHz (9 samples)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,497 | INFO     | ..............................
[2025-12-18 05:46:11] 2025-12-18 10:45:09,497 | INFO     | . Timing measurements:
[2025-12-18 05:46:11] 2025-12-18 10:45:09,497 | INFO     | . get job = 0 s
[2025-12-18 05:46:11] 2025-12-18 10:45:09,497 | INFO     | . initial setup = 2 s
[2025-12-18 05:46:11] 2025-12-18 10:45:09,497 | INFO     | . payload setup = 4 s
[2025-12-18 05:46:11] 2025-12-18 10:45:09,497 | INFO     | . stage-in = 0 s
[2025-12-18 05:46:11] 2025-12-18 10:45:09,497 | INFO     | . payload execution = 10492 s
[2025-12-18 05:46:11] 2025-12-18 10:45:09,497 | INFO     | . stage-out = 0 s
[2025-12-18 05:46:11] 2025-12-18 10:45:09,498 | INFO     | . log creation = 0 s
[2025-12-18 05:46:11] 2025-12-18 10:45:09,498 | INFO     | ..............................
[2025-12-18 05:46:11] 2025-12-18 10:45:09,572 | INFO     | 
[2025-12-18 05:46:11] 2025-12-18 10:45:09,572 | INFO     | job summary report
[2025-12-18 05:46:11] 2025-12-18 10:45:09,572 | INFO     | --------------------------------------------------
[2025-12-18 05:46:11] 2025-12-18 10:45:09,572 | INFO     | PanDA job id: 6933048848
[2025-12-18 05:46:11] 2025-12-18 10:45:09,573 | INFO     | task id: 47929408
[2025-12-18 05:46:11] 2025-12-18 10:45:09,573 | INFO     | errors: (none)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,573 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 05:46:11] 2025-12-18 10:45:09,573 | INFO     | pilot state: finished 
[2025-12-18 05:46:11] 2025-12-18 10:45:09,573 | INFO     | transexitcode: 0
[2025-12-18 05:46:11] 2025-12-18 10:45:09,573 | INFO     | exeerrorcode: 0
[2025-12-18 05:46:11] 2025-12-18 10:45:09,574 | INFO     | exeerrordiag: 
[2025-12-18 05:46:11] 2025-12-18 10:45:09,574 | INFO     | exitcode: 0
[2025-12-18 05:46:11] 2025-12-18 10:45:09,574 | INFO     | exitmsg: OK
[2025-12-18 05:46:11] 2025-12-18 10:45:09,574 | INFO     | cpuconsumptiontime: 79771 s
[2025-12-18 05:46:11] 2025-12-18 10:45:09,574 | INFO     | nevents: 400
[2025-12-18 05:46:11] 2025-12-18 10:45:09,574 | INFO     | neventsw: 0
[2025-12-18 05:46:11] 2025-12-18 10:45:09,574 | INFO     | pid: 10242
[2025-12-18 05:46:11] 2025-12-18 10:45:09,575 | INFO     | pgrp: 10242
[2025-12-18 05:46:11] 2025-12-18 10:45:09,575 | INFO     | corecount: 8
[2025-12-18 05:46:11] 2025-12-18 10:45:09,575 | INFO     | event service: False
[2025-12-18 05:46:11] 2025-12-18 10:45:09,575 | INFO     | sizes: {0: 2284031, 4: 2284293, 11: 2284321, 10501: 2313142, 10503: 2322196, 10508: 2322398}
[2025-12-18 05:46:11] 2025-12-18 10:45:09,575 | INFO     | --------------------------------------------------
[2025-12-18 05:46:11] 2025-12-18 10:45:09,575 | INFO     | 
[2025-12-18 05:46:11] 2025-12-18 10:45:09,576 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-18 05:46:11] 2025-12-18 10:45:09,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,590 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,590 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,590 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,590 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,590 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,590 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,591 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,591 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,591 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,591 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,592 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,592 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 05:46:11] 2025-12-18 10:45:09,592 | INFO     | job 6933048848 has completed (purged errors)
[2025-12-18 05:46:11] 2025-12-18 10:45:09,593 | INFO     | overall cleanup function is called
[2025-12-18 05:46:11] 2025-12-18 10:45:10,601 | INFO     | --- collectZombieJob: --- 10, [10242]
[2025-12-18 05:46:11] 2025-12-18 10:45:10,601 | INFO     | zombie collector waiting for pid 10242
[2025-12-18 05:46:11] 2025-12-18 10:45:10,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 05:46:11] 2025-12-18 10:45:10,602 | INFO     | collected zombie processes
[2025-12-18 05:46:11] 2025-12-18 10:45:10,602 | INFO     | will attempt to kill all subprocesses of pid=10242
[2025-12-18 05:46:11] 2025-12-18 10:45:10,757 | INFO     | process IDs to be killed: [10242] (in reverse order)
[2025-12-18 05:46:11] 2025-12-18 10:45:10,796 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 05:46:11] 2025-12-18 10:45:10,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 05:46:11] 2025-12-18 10:45:10,799 | INFO     | did not find any defunct processes belonging to 10242
[2025-12-18 05:46:11] 2025-12-18 10:45:10,801 | INFO     | did not find any defunct processes belonging to 10242
[2025-12-18 05:46:11] 2025-12-18 10:45:10,801 | INFO     | ready for new job
[2025-12-18 05:46:11] 2025-12-18 10:45:10,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 05:46:11] 2025-12-18 10:45:10,803 | INFO     | ***************************************
[2025-12-18 05:46:11] 2025-12-18 10:45:10,803 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 05:46:11] 2025-12-18 10:45:10,803 | INFO     | ***************************************
[2025-12-18 05:46:11] 2025-12-18 10:45:10,803 | INFO     | 
[2025-12-18 05:46:11] 2025-12-18 10:45:10,804 | INFO     | architecture information:
[2025-12-18 05:46:11] 2025-12-18 10:45:10,804 | INFO     | executing command: cat /etc/os-release
[2025-12-18 05:46:11] 2025-12-18 10:45:10,814 | INFO     | cat /etc/os-release:
[2025-12-18 05:46:11] NAME="CentOS Linux"
[2025-12-18 05:46:11] VERSION="7 (Core)"
[2025-12-18 05:46:11] ID="centos"
[2025-12-18 05:46:11] ID_LIKE="rhel fedora"
[2025-12-18 05:46:11] VERSION_ID="7"
[2025-12-18 05:46:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 05:46:11] ANSI_COLOR="0;31"
[2025-12-18 05:46:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 05:46:11] HOME_URL="https://www.centos.org/"
[2025-12-18 05:46:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 05:46:11] 
[2025-12-18 05:46:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 05:46:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 05:46:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 05:46:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 05:46:11] 
[2025-12-18 05:46:11] 2025-12-18 10:45:10,814 | INFO     | ***************************************
[2025-12-18 05:46:11] 2025-12-18 10:45:11,317 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-18 05:46:11] 2025-12-18 10:45:11,330 | INFO     | sufficient remaining disk space (28360835072 B)
[2025-12-18 05:46:11] 2025-12-18 10:45:11,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 05:46:11] 2025-12-18 10:45:11,330 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 05:46:11] 2025-12-18 10:45:11,330 | INFO     | update_server=False
[2025-12-18 05:46:11] 2025-12-18 10:45:11,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 05:46:11] 2025-12-18 10:45:11,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 05:46:11] 2025-12-18 10:45:11,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 05:46:11] 2025-12-18 10:45:11,670 | INFO     | all payload control threads have been joined
[2025-12-18 05:46:11] 2025-12-18 10:45:11,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 05:46:11] 2025-12-18 10:45:11,738 | INFO     | aborting loop
[2025-12-18 05:46:11] 2025-12-18 10:45:11,875 | INFO     | all job control threads have been joined
[2025-12-18 05:46:11] 2025-12-18 10:45:12,172 | INFO     | all data control threads have been joined
[2025-12-18 05:46:11] 2025-12-18 10:45:12,336 | INFO     | [job] retrieve thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:12,336 | INFO     | [job] queue monitor thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:12,381 | INFO     | [payload] failed_post thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:12,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 05:46:11] 2025-12-18 10:45:12,676 | INFO     | [payload] control thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:12,693 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:12,743 | INFO     | [job] job monitor thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:12,881 | INFO     | [job] control thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:12,984 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:13,177 | INFO     | [data] control thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:13,527 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:13,527 | INFO     | [data] copytool_in thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:13,675 | INFO     | [payload] validate_post thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:13,687 | INFO     | [job] validate thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:14,604 | INFO     | [data] copytool_out thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:15,357 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:21,612 | INFO     | job.realtimelogging is not enabled
[2025-12-18 05:46:11] 2025-12-18 10:45:22,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 05:46:11] 2025-12-18 10:45:42,437 | INFO     | PID=3715 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-18 05:46:11] 2025-12-18 10:45:42,438 | INFO     | .. there are 3 such processes running
[2025-12-18 05:46:11] 2025-12-18 10:45:42,439 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 05:46:11] 2025-12-18 10:45:42,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 05:46:11] 2025-12-18 10:45:42,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 05:46:11] 2025-12-18 10:46:04,106 | INFO     | [monitor] cgroup control has ended
[2025-12-18 05:46:11] 2025-12-18 10:46:06,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756488193856)>', '<ExcThread(monitor, started 139755685672704)>']
[2025-12-18 05:46:11] 2025-12-18 10:46:06,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 05:46:11] 2025-12-18 10:46:06,541 | INFO     | [monitor] control thread has ended
[2025-12-18 05:46:11] 2025-12-18 10:46:11,104 | INFO     | all workflow threads have been joined
[2025-12-18 05:46:11] 2025-12-18 10:46:11,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 05:46:11] 2025-12-18 10:46:11,105 | INFO     | traces error code: 0
[2025-12-18 05:46:11] 2025-12-18 10:46:11,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 05:46:11] 2025-12-18 10:46:11,226 [wrapper] ==== pilot stdout END ====
[2025-12-18 05:46:11] 2025-12-18 10:46:11,228 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 05:46:11] 2025-12-18 10:46:11,230 [wrapper] pilotpid: 3715
[2025-12-18 05:46:11] 2025-12-18 10:46:11,232 [wrapper] Pilot exit status: 0
[2025-12-18 05:46:11] 2025-12-18 10:46:11,239 [wrapper] pandaids: 6933048848
[2025-12-18 05:46:11] 2025-12-18 10:46:11,278 [wrapper] cleanup supervisor_pilot 31293 3716
[2025-12-18 05:46:11] 2025-12-18 10:46:11,281 [wrapper] Test setup, not cleaning
[2025-12-18 05:46:11] 2025-12-18 10:46:11,283 [wrapper] apfmon messages muted
[2025-12-18 05:46:11] 2025-12-18 10:46:11,285 [wrapper] ==== wrapper stdout END ====
[2025-12-18 05:46:11] 2025-12-18 10:46:11,287 [wrapper] ==== wrapper stderr END ====
[2025-12-18 05:46:11]  *** Error codes and diagnostics ***
[2025-12-18 05:46:11]     "exeErrorCode": 0,
[2025-12-18 05:46:11]     "exeErrorDiag": "",
[2025-12-18 05:46:11]     "pilotErrorCode": 0,
[2025-12-18 05:46:11]     "pilotErrorDiag": "",
[2025-12-18 05:46:11]  *** Listing of results directory ***
[2025-12-18 05:46:11] total 435240
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas    579449 Dec 17 22:11 pilot3.tar.gz
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas      5112 Dec 17 22:11 queuedata.json
[2025-12-18 05:46:11] -rwx------ 1 boincer umatlas     36322 Dec 17 22:12 runpilot2-wrapper.sh
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas       100 Dec 18 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 05:46:11] -rwxr-xr-x 1 boincer umatlas      7986 Dec 18 02:49 run_atlas
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas       105 Dec 18 02:49 job.xml
[2025-12-18 05:46:11] -rw-r--r-- 2 boincer umatlas 254003970 Dec 18 02:49 EVNT.47929406._000001.pool.root.1
[2025-12-18 05:46:11] -rw-r--r-- 2 boincer umatlas     15847 Dec 18 02:49 start_atlas.sh
[2025-12-18 05:46:11] drwxrwx--x 2 boincer umatlas      4096 Dec 18 02:49 shared
[2025-12-18 05:46:11] -rw-r--r-- 2 boincer umatlas    592411 Dec 18 02:49 input.tar.gz
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas         0 Dec 18 02:49 boinc_lockfile
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas      2570 Dec 18 02:49 pandaJob.out
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas        57 Dec 18 02:49 setup.sh.local
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas    988102 Dec 18 02:49 agis_schedconf.cvmfs.json
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas   1516240 Dec 18 02:49 agis_ddmendpoints.agis.ALL.json
[2025-12-18 05:46:11] drwx------ 5 boincer umatlas      4096 Dec 18 02:49 pilot3
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas      5951 Dec 18 05:38 init_data.xml
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas 183958678 Dec 18 05:44 HITS.47929408._000075.pool.root.1
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas       530 Dec 18 05:44 boinc_task_state.xml
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas      1053 Dec 18 05:44 memory_monitor_summary.json
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas    424875 Dec 18 05:45 log.47929408._000075.job.log.tgz.1
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas      7847 Dec 18 05:45 heartbeat.json
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas        95 Dec 18 05:45 pilot_heartbeat.json
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas        28 Dec 18 05:45 wrapper_checkpoint.txt
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas      8192 Dec 18 05:45 boinc_mmap_file
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas      4892 Dec 18 05:46 pilotlog.txt
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas   1479437 Dec 18 05:46 log.47929408._000075.job.log.1
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas       357 Dec 18 05:46 output.list
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas       620 Dec 18 05:46 runtime_log
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas   1925120 Dec 18 05:46 result.tar.gz
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas       662 Dec 18 05:46 t8IODmkcJq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoZYKDmetgj1m.diag
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas      9343 Dec 18 05:46 runtime_log.err
[2025-12-18 05:46:11] -rw-r--r-- 1 boincer umatlas     21317 Dec 18 05:46 stderr.txt
[2025-12-18 05:46:11] HITS file was successfully produced:
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas 183958678 Dec 18 05:44 shared/HITS.pool.root.1
[2025-12-18 05:46:11]  *** Contents of shared directory: ***
[2025-12-18 05:46:11] total 430180
[2025-12-18 05:46:11] -rw-r--r-- 2 boincer umatlas 254003970 Dec 18 02:49 ATLAS.root_0
[2025-12-18 05:46:11] -rw-r--r-- 2 boincer umatlas     15847 Dec 18 02:49 start_atlas.sh
[2025-12-18 05:46:11] -rw-r--r-- 2 boincer umatlas    592411 Dec 18 02:49 input.tar.gz
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas 183958678 Dec 18 05:44 HITS.pool.root.1
[2025-12-18 05:46:11] -rw------- 1 boincer umatlas   1925120 Dec 18 05:46 result.tar.gz
05:46:12 (32333): run_atlas exited; CPU time 79899.968969
05:46:12 (32333): called boinc_finish(0)

</stderr_txt>
]]>

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