Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:34:08 (2389931): wrapper (7.7.26015): starting
18:34:08 (2389931): wrapper: running run_atlas (--nthreads 3)
[2025-12-18 18:34:08] Arguments: --nthreads 3
[2025-12-18 18:34:08] Threads: 3
[2025-12-18 18:34:08] Checking for CVMFS
[2025-12-18 18:34:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 18:34:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 18:34:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 18:34:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 18:34:08] 2.9.2.0 415797 7396 84184 154160 3 57 20899391 36864001 0 130560 0 5109119 99.990 269011 17760 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 18:34:08] CVMFS is ok
[2025-12-18 18:34:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 18:34:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 18:34:08] Further information can be found at the LHC@home message board.
[2025-12-18 18:34:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 18:34:08] Checking for apptainer binary...
[2025-12-18 18:34:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 18:34:08] Running /usr/bin/apptainer --version
[2025-12-18 18:34:08] apptainer version 1.4.1-1.1
[2025-12-18 18:34:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 18:34:08] magicA246a
[2025-12-18 18:34:08] apptainer works
[2025-12-18 18:34:09] Set ATHENA_PROC_NUMBER=3
[2025-12-18 18:34:09] Set ATHENA_CORE_NUMBER=3
[2025-12-18 18:34:09] Starting ATLAS job with PandaID=6933035687
[2025-12-18 18:34:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 20:04:26]  *** The last 200 lines of the pilot log: ***
[2025-12-18 20:04:26] 2025-12-18 19:03:34,117 | INFO     | update_server=False
[2025-12-18 20:04:26] 2025-12-18 19:03:34,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 20:04:26] 2025-12-18 19:03:34,131 | INFO     | all job control threads have been joined
[2025-12-18 20:04:26] 2025-12-18 19:03:34,700 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 20:04:26] 2025-12-18 19:03:34,700 | INFO     | aborting loop
[2025-12-18 20:04:26] 2025-12-18 19:03:34,834 | INFO     | all payload control threads have been joined
[2025-12-18 20:04:26] 2025-12-18 19:03:34,997 | INFO     | all data control threads have been joined
[2025-12-18 20:04:26] 2025-12-18 19:03:35,122 | INFO     | [job] retrieve thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:35,136 | INFO     | [job] control thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:35,144 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:35,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 20:04:26] 2025-12-18 19:03:35,563 | INFO     | [payload] failed_post thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:35,701 | INFO     | [job] job monitor thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:35,840 | INFO     | [payload] control thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:35,993 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:35,998 | INFO     | [data] control thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:36,092 | INFO     | [data] copytool_in thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:36,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 20:04:26] 2025-12-18 19:03:36,490 | INFO     | [job] validate thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:36,617 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:36,719 | INFO     | [payload] validate_post thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:37,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 20:04:26] 2025-12-18 19:03:37,304 | INFO     | [data] copytool_out thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:38,120 | INFO     | [job] queue monitor thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:40,491 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:03:45,155 | INFO     | job.realtimelogging is not enabled
[2025-12-18 20:04:26] 2025-12-18 19:03:46,161 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 20:04:26] 2025-12-18 19:04:03,995 | INFO     | PID=2393660 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 20:04:26] 2025-12-18 19:04:03,995 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 20:04:26] 2025-12-18 19:04:03,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 20:04:26] 2025-12-18 19:04:03,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 20:04:26] 2025-12-18 19:04:13,387 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-12-18 20:04:26] 2025-12-18 19:04:19,511 | INFO     | [monitor] cgroup control has ended
[2025-12-18 20:04:26] 2025-12-18 19:04:21,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858158040896)>', '<ExcThread(monitor, started 139857674360576)>']
[2025-12-18 20:04:26] 2025-12-18 19:04:22,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 20:04:26] 2025-12-18 19:04:22,080 | INFO     | [monitor] control thread has ended
[2025-12-18 20:04:26] 2025-12-18 19:04:26,142 | INFO     | all workflow threads have been joined
[2025-12-18 20:04:26] 2025-12-18 19:04:26,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 20:04:26] 2025-12-18 19:04:26,143 | INFO     | traces error code: 0
[2025-12-18 20:04:26] 2025-12-18 19:04:26,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 20:04:26] 2025-12-18 19:04:26,207 [wrapper] ==== pilot stdout END ====
[2025-12-18 20:04:26] 2025-12-18 19:04:26,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 20:04:26] 2025-12-18 19:04:26,212 [wrapper] pilotpid: 2393660
[2025-12-18 20:04:26] 2025-12-18 19:04:26,215 [wrapper] Pilot exit status: 0
[2025-12-18 20:04:26] 2025-12-18 19:04:26,225 [wrapper] pandaids: 6933035687
[2025-12-18 20:04:26] 2025-12-18 19:04:26,247 [wrapper] cleanup supervisor_pilot 2415793 2393661
[2025-12-18 20:04:26] 2025-12-18 19:04:26,250 [wrapper] Test setup, not cleaning
[2025-12-18 20:04:26] 2025-12-18 19:04:26,253 [wrapper] apfmon messages muted
[2025-12-18 20:04:26] 2025-12-18 19:04:26,256 [wrapper] ==== wrapper stdout END ====
[2025-12-18 20:04:26] 2025-12-18 19:04:26,259 [wrapper] ==== wrapper stderr END ====
[2025-12-18 20:04:26]  *** Error codes and diagnostics ***
[2025-12-18 20:04:26]     "exeErrorCode": 0,
[2025-12-18 20:04:26]     "exeErrorDiag": "",
[2025-12-18 20:04:26]     "pilotErrorCode": 0,
[2025-12-18 20:04:26]     "pilotErrorDiag": "",
[2025-12-18 20:04:26]  *** Listing of results directory ***
[2025-12-18 20:04:26] total 341272
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc    579449 Dec 18 04:11 pilot3.tar.gz
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc      5112 Dec 18 04:11 queuedata.json
[2025-12-18 20:04:26] -rwx------ 1 boinc boinc     36322 Dec 18 04:11 runpilot2-wrapper.sh
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc       100 Dec 18 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 20:04:26] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 18:34 run_atlas
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc       105 Dec 18 18:34 job.xml
[2025-12-18 20:04:26] -rw-r--r-- 2 boinc boinc 192057404 Dec 18 18:34 EVNT.47886929._000588.pool.root.1
[2025-12-18 20:04:26] -rw-r--r-- 2 boinc boinc    592403 Dec 18 18:34 input.tar.gz
[2025-12-18 20:04:26] -rw-r--r-- 2 boinc boinc     15847 Dec 18 18:34 start_atlas.sh
[2025-12-18 20:04:26] drwxrwx--x 2 boinc boinc      4096 Dec 18 18:34 shared
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc         0 Dec 18 18:34 boinc_setup_complete
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc      6447 Dec 18 18:34 init_data.xml
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc         0 Dec 18 18:34 boinc_lockfile
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc      2515 Dec 18 18:34 pandaJob.out
[2025-12-18 20:04:26] -rw------- 1 boinc boinc    988125 Dec 18 18:34 agis_schedconf.cvmfs.json
[2025-12-18 20:04:26] -rw------- 1 boinc boinc   1516240 Dec 18 18:34 agis_ddmendpoints.agis.ALL.json
[2025-12-18 20:04:26] drwx------ 5 boinc boinc      4096 Dec 18 18:34 pilot3
[2025-12-18 20:04:26] -rw------- 1 boinc boinc 151435280 Dec 18 20:03 HITS.47886933._013779.pool.root.1
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc       529 Dec 18 20:03 boinc_task_state.xml
[2025-12-18 20:04:26] -rw------- 1 boinc boinc      1035 Dec 18 20:03 memory_monitor_summary.json
[2025-12-18 20:04:26] -rw------- 1 boinc boinc    250196 Dec 18 20:03 log.47886933._013779.job.log.tgz.1
[2025-12-18 20:04:26] -rw------- 1 boinc boinc      7765 Dec 18 20:03 heartbeat.json
[2025-12-18 20:04:26] -rw------- 1 boinc boinc        95 Dec 18 20:04 pilot_heartbeat.json
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc      8192 Dec 18 20:04 boinc_mmap_file
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc        27 Dec 18 20:04 wrapper_checkpoint.txt
[2025-12-18 20:04:26] -rw------- 1 boinc boinc      4824 Dec 18 20:04 pilotlog.txt
[2025-12-18 20:04:26] -rw------- 1 boinc boinc    781516 Dec 18 20:04 log.47886933._013779.job.log.1
[2025-12-18 20:04:26] -rw------- 1 boinc boinc       357 Dec 18 20:04 output.list
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc       620 Dec 18 20:04 runtime_log
[2025-12-18 20:04:26] -rw------- 1 boinc boinc   1054720 Dec 18 20:04 result.tar.gz
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc      8917 Dec 18 20:04 runtime_log.err
[2025-12-18 20:04:26] -rw------- 1 boinc boinc       662 Dec 18 20:04 dYzMDmwbJq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcXYKDm5IMjEm.diag
[2025-12-18 20:04:26] -rw-r--r-- 1 boinc boinc      7613 Dec 18 20:04 stderr.txt
[2025-12-18 20:04:26] HITS file was successfully produced:
[2025-12-18 20:04:26] -rw------- 1 boinc boinc 151435280 Dec 18 20:03 shared/HITS.pool.root.1
[2025-12-18 20:04:26]  *** Contents of shared directory: ***
[2025-12-18 20:04:26] total 337084
[2025-12-18 20:04:26] -rw-r--r-- 2 boinc boinc 192057404 Dec 18 18:34 ATLAS.root_0
[2025-12-18 20:04:26] -rw-r--r-- 2 boinc boinc    592403 Dec 18 18:34 input.tar.gz
[2025-12-18 20:04:26] -rw-r--r-- 2 boinc boinc     15847 Dec 18 18:34 start_atlas.sh
[2025-12-18 20:04:26] -rw------- 1 boinc boinc 151435280 Dec 18 20:03 HITS.pool.root.1
[2025-12-18 20:04:26] -rw------- 1 boinc boinc   1054720 Dec 18 20:04 result.tar.gz
20:04:27 (2389931): run_atlas exited; CPU time 15368.537521
20:04:27 (2389931): called boinc_finish(0)

</stderr_txt>
]]>

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