Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:06:09 (2363858): wrapper (7.7.26015): starting
17:06:09 (2363858): wrapper: running run_atlas (--nthreads 3)
[2025-12-18 17:06:09] Arguments: --nthreads 3
[2025-12-18 17:06:09] Threads: 3
[2025-12-18 17:06:09] Checking for CVMFS
[2025-12-18 17:06:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 17:06:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 17:06:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 17:06:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 17:06:10] 2.9.2.0 415797 7308 84376 154155 3 57 20859298 36864001 0 130560 0 5043162 99.990 260822 17516 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 17:06:10] CVMFS is ok
[2025-12-18 17:06:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 17:06:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 17:06:10] Further information can be found at the LHC@home message board.
[2025-12-18 17:06:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 17:06:10] Checking for apptainer binary...
[2025-12-18 17:06:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 17:06:10] Running /usr/bin/apptainer --version
[2025-12-18 17:06:10] apptainer version 1.4.1-1.1
[2025-12-18 17:06:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 17:06:10] magicA246a
[2025-12-18 17:06:10] apptainer works
[2025-12-18 17:06:10] Set ATHENA_PROC_NUMBER=3
[2025-12-18 17:06:10] Set ATHENA_CORE_NUMBER=3
[2025-12-18 17:06:10] Starting ATLAS job with PandaID=6932561103
[2025-12-18 17:06:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 18:33:45]  *** The last 200 lines of the pilot log: ***
[2025-12-18 18:33:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 18:33:45] 
[2025-12-18 18:33:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 18:33:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 18:33:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 18:33:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 18:33:45] 
[2025-12-18 18:33:45] 2025-12-18 17:33:14,889 | INFO     | ***************************************
[2025-12-18 18:33:45] 2025-12-18 17:33:15,392 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-18 18:33:45] 2025-12-18 17:33:15,403 | INFO     | sufficient remaining disk space (284282585088 B)
[2025-12-18 18:33:45] 2025-12-18 17:33:15,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 18:33:45] 2025-12-18 17:33:15,404 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 18:33:45] 2025-12-18 17:33:15,404 | INFO     | update_server=False
[2025-12-18 18:33:45] 2025-12-18 17:33:15,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 18:33:45] 2025-12-18 17:33:15,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 18:33:45] 2025-12-18 17:33:15,532 | INFO     | all data control threads have been joined
[2025-12-18 18:33:45] 2025-12-18 17:33:15,761 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-18 18:33:45] 2025-12-18 17:33:15,762 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-18 18:33:45] 2025-12-18 17:33:15,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 18:33:45] 2025-12-18 17:33:15,762 | INFO     | will abort loop
[2025-12-18 18:33:45] 2025-12-18 17:33:16,103 | INFO     | all job control threads have been joined
[2025-12-18 18:33:45] 2025-12-18 17:33:16,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 18:33:45] 2025-12-18 17:33:16,408 | INFO     | [job] queue monitor thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:16,409 | INFO     | [job] retrieve thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:16,487 | INFO     | [payload] failed_post thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:16,538 | INFO     | [data] control thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:16,689 | INFO     | [data] copytool_in thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:16,767 | INFO     | [job] job monitor thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:16,801 | INFO     | all payload control threads have been joined
[2025-12-18 18:33:45] 2025-12-18 17:33:17,051 | INFO     | [payload] validate_post thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:17,089 | INFO     | [job] validate thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:17,097 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:17,108 | INFO     | [job] control thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:17,170 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:17,507 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:17,804 | INFO     | [payload] control thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:18,207 | INFO     | [data] copytool_out thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:18,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 18:33:45] 2025-12-18 17:33:21,677 | INFO     | [monitor] cgroup control has ended
[2025-12-18 18:33:45] 2025-12-18 17:33:22,882 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:25,814 | INFO     | job.realtimelogging is not enabled
[2025-12-18 18:33:45] 2025-12-18 17:33:26,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 18:33:45] 2025-12-18 17:33:26,957 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137197307712)>', '<ExcThread(monitor, started 140136578799360)>']
[2025-12-18 18:33:45] 2025-12-18 17:33:31,982 | INFO     | all workflow threads have been joined
[2025-12-18 18:33:45] 2025-12-18 17:33:31,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 18:33:45] 2025-12-18 17:33:31,983 | INFO     | traces error code: 0
[2025-12-18 18:33:45] 2025-12-18 17:33:31,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 18:33:45] 2025-12-18 17:33:45,116 | INFO     | PID=2367589 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 18:33:45] 2025-12-18 17:33:45,117 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 18:33:45] 2025-12-18 17:33:45,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 18:33:45] 2025-12-18 17:33:45,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 18:33:45] 2025-12-18 17:33:45,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 18:33:45] 2025-12-18 17:33:45,117 | INFO     | [monitor] control thread has ended
[2025-12-18 18:33:45] 2025-12-18 17:33:45,166 [wrapper] ==== pilot stdout END ====
[2025-12-18 18:33:45] 2025-12-18 17:33:45,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 18:33:45] 2025-12-18 17:33:45,171 [wrapper] pilotpid: 2367589
[2025-12-18 18:33:45] 2025-12-18 17:33:45,173 [wrapper] Pilot exit status: 0
[2025-12-18 18:33:45] 2025-12-18 17:33:45,180 [wrapper] pandaids: 6932561103
[2025-12-18 18:33:45] 2025-12-18 17:33:45,199 [wrapper] cleanup supervisor_pilot 2387101 2367590
[2025-12-18 18:33:45] 2025-12-18 17:33:45,202 [wrapper] Test setup, not cleaning
[2025-12-18 18:33:45] 2025-12-18 17:33:45,204 [wrapper] apfmon messages muted
[2025-12-18 18:33:45] 2025-12-18 17:33:45,207 [wrapper] ==== wrapper stdout END ====
[2025-12-18 18:33:45] 2025-12-18 17:33:45,209 [wrapper] ==== wrapper stderr END ====
[2025-12-18 18:33:45]  *** Error codes and diagnostics ***
[2025-12-18 18:33:45]     "exeErrorCode": 0,
[2025-12-18 18:33:45]     "exeErrorDiag": "",
[2025-12-18 18:33:45]     "pilotErrorCode": 0,
[2025-12-18 18:33:45]     "pilotErrorDiag": "",
[2025-12-18 18:33:45]  *** Listing of results directory ***
[2025-12-18 18:33:45] total 338200
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc    579449 Dec 17 20:55 pilot3.tar.gz
[2025-12-18 18:33:45] -rwx------ 1 boinc boinc     36322 Dec 17 20:58 runpilot2-wrapper.sh
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc      5112 Dec 17 20:59 queuedata.json
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc       100 Dec 18 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 18:33:45] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 17:06 run_atlas
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc       105 Dec 18 17:06 job.xml
[2025-12-18 18:33:45] -rw-r--r-- 2 boinc boinc 193270768 Dec 18 17:06 EVNT.47886929._000463.pool.root.1
[2025-12-18 18:33:45] -rw-r--r-- 2 boinc boinc    592399 Dec 18 17:06 input.tar.gz
[2025-12-18 18:33:45] -rw-r--r-- 2 boinc boinc     15847 Dec 18 17:06 start_atlas.sh
[2025-12-18 18:33:45] drwxrwx--x 2 boinc boinc      4096 Dec 18 17:06 shared
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc         0 Dec 18 17:06 boinc_setup_complete
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc      6447 Dec 18 17:06 init_data.xml
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc         0 Dec 18 17:06 boinc_lockfile
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc      2515 Dec 18 17:06 pandaJob.out
[2025-12-18 18:33:45] -rw------- 1 boinc boinc    988125 Dec 18 17:06 agis_schedconf.cvmfs.json
[2025-12-18 18:33:45] -rw------- 1 boinc boinc   1516240 Dec 18 17:06 agis_ddmendpoints.agis.ALL.json
[2025-12-18 18:33:45] drwx------ 5 boinc boinc      4096 Dec 18 17:06 pilot3
[2025-12-18 18:33:45] -rw------- 1 boinc boinc        95 Dec 18 18:32 pilot_heartbeat.json
[2025-12-18 18:33:45] -rw------- 1 boinc boinc 147077493 Dec 18 18:32 HITS.47886933._010520.pool.root.1
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc       529 Dec 18 18:32 boinc_task_state.xml
[2025-12-18 18:33:45] -rw------- 1 boinc boinc      1022 Dec 18 18:33 memory_monitor_summary.json
[2025-12-18 18:33:45] -rw------- 1 boinc boinc    267370 Dec 18 18:33 log.47886933._010520.job.log.tgz.1
[2025-12-18 18:33:45] -rw------- 1 boinc boinc      7762 Dec 18 18:33 heartbeat.json
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc      8192 Dec 18 18:33 boinc_mmap_file
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc        27 Dec 18 18:33 wrapper_checkpoint.txt
[2025-12-18 18:33:45] -rw------- 1 boinc boinc       747 Dec 18 18:33 pilotlog.txt
[2025-12-18 18:33:45] -rw------- 1 boinc boinc    764062 Dec 18 18:33 log.47886933._010520.job.log.1
[2025-12-18 18:33:45] -rw------- 1 boinc boinc       357 Dec 18 18:33 output.list
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc       620 Dec 18 18:33 runtime_log
[2025-12-18 18:33:45] -rw------- 1 boinc boinc   1054720 Dec 18 18:33 result.tar.gz
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc      8917 Dec 18 18:33 runtime_log.err
[2025-12-18 18:33:45] -rw------- 1 boinc boinc       662 Dec 18 18:33 ThjKDmQqCq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMicKDmQMCS7m.diag
[2025-12-18 18:33:45] -rw-r--r-- 1 boinc boinc      8626 Dec 18 18:33 stderr.txt
[2025-12-18 18:33:45] HITS file was successfully produced:
[2025-12-18 18:33:45] -rw------- 1 boinc boinc 147077493 Dec 18 18:32 shared/HITS.pool.root.1
[2025-12-18 18:33:45]  *** Contents of shared directory: ***
[2025-12-18 18:33:45] total 334012
[2025-12-18 18:33:45] -rw-r--r-- 2 boinc boinc 193270768 Dec 18 17:06 ATLAS.root_0
[2025-12-18 18:33:45] -rw-r--r-- 2 boinc boinc    592399 Dec 18 17:06 input.tar.gz
[2025-12-18 18:33:45] -rw-r--r-- 2 boinc boinc     15847 Dec 18 17:06 start_atlas.sh
[2025-12-18 18:33:45] -rw------- 1 boinc boinc 147077493 Dec 18 18:32 HITS.pool.root.1
[2025-12-18 18:33:45] -rw------- 1 boinc boinc   1054720 Dec 18 18:33 result.tar.gz
18:33:47 (2363858): run_atlas exited; CPU time 14973.274362
18:33:47 (2363858): called boinc_finish(0)

</stderr_txt>
]]>

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