Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:35 (2778864): wrapper (7.7.26015): starting
00:13:35 (2778864): wrapper: running run_atlas (--nthreads 8)
[2025-12-18 00:13:35] Arguments: --nthreads 8
[2025-12-18 00:13:35] Threads: 8
[2025-12-18 00:13:35] Checking for CVMFS
[2025-12-18 00:13:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 00:13:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 00:13:36] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 00:13:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 00:13:37] 2.13.3.0 5210 21956 312708 154135 1 303 30651653 32935936 17756 16776704 0 55035504 99.332 96592984 32853 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-18 00:13:37] CVMFS is ok
[2025-12-18 00:13:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 00:13:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 00:13:37] Further information can be found at the LHC@home message board.
[2025-12-18 00:13:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 00:13:37] Checking for apptainer binary...
[2025-12-18 00:13:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 00:13:37] Running /usr/bin/apptainer --version
[2025-12-18 00:13:37] apptainer version 1.4.5-2.el9
[2025-12-18 00:13:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 00:13:38] c6-1-26-2.aglt2.org
[2025-12-18 00:13:38] apptainer works
[2025-12-18 00:13:38] Set ATHENA_PROC_NUMBER=8
[2025-12-18 00:13:38] Set ATHENA_CORE_NUMBER=8
[2025-12-18 00:13:38] Starting ATLAS job with PandaID=6932713680
[2025-12-18 00:13:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 12:17:36]  *** The last 200 lines of the pilot log: ***
[2025-12-18 12:17:36] 2025-12-18 17:16:12,799 | INFO     | time since job start (43288s) is within the limit (174528.0s)
[2025-12-18 12:17:36] 2025-12-18 17:16:13,905 | INFO     | monitor loop #2280: job 0:6932713680 is in state 'finished'
[2025-12-18 12:17:36] 2025-12-18 17:16:13,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 12:17:36] 2025-12-18 17:16:14,805 | INFO     | time since job start (43290s) is within the limit (174528.0s)
[2025-12-18 12:17:36] 2025-12-18 17:16:16,197 | INFO     | PID=2790387 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 12:17:36] 2025-12-18 17:16:16,197 | INFO     | .. there are 24 such processes running
[2025-12-18 12:17:36] 2025-12-18 17:16:16,408 | INFO     | monitor loop #2281: job 0:6932713680 is in state 'finished'
[2025-12-18 12:17:36] 2025-12-18 17:16:16,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,197 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-18 12:17:36] 2025-12-18 17:16:17,203 | INFO     | time since job start (43293s) is within the limit (174528.0s)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,207 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2864.477125000001
[2025-12-18 12:17:36] 2025-12-18 17:16:17,218 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6932713680/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,218 | INFO     | extracted standard info from prmon json
[2025-12-18 12:17:36] 2025-12-18 17:16:17,219 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 12:17:36] 2025-12-18 17:16:17,219 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 12:17:36] 2025-12-18 17:16:17,219 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 12:17:36] 2025-12-18 17:16:17,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 12:17:36] 2025-12-18 17:16:17,230 | INFO     | fitting pss+swap vs Time
[2025-12-18 12:17:36] 2025-12-18 17:16:17,231 | INFO     | sum of square deviations: 110036720153.25842
[2025-12-18 12:17:36] 2025-12-18 17:16:17,240 | INFO     | sum of deviations: 502378455151.1825
[2025-12-18 12:17:36] 2025-12-18 17:16:17,240 | INFO     | mean x: 1766056590.309322
[2025-12-18 12:17:36] 2025-12-18 17:16:17,240 | INFO     | mean y: 2047507.7754237289
[2025-12-18 12:17:36] 2025-12-18 17:16:17,240 | INFO     | intersect: -8060977092.680094
[2025-12-18 12:17:36] 2025-12-18 17:16:17,241 | INFO     | chi2: 4.867600008050151
[2025-12-18 12:17:36] 2025-12-18 17:16:17,242 | INFO     | sum of square deviations: 107721818949.96042
[2025-12-18 12:17:36] 2025-12-18 17:16:17,251 | INFO     | sum of deviations: 532746861888.3166
[2025-12-18 12:17:36] 2025-12-18 17:16:17,251 | INFO     | mean x: 1766056437.8150783
[2025-12-18 12:17:36] 2025-12-18 17:16:17,251 | INFO     | mean y: 2049492.894736842
[2025-12-18 12:17:36] 2025-12-18 17:16:17,252 | INFO     | intersect: -8732123716.719336
[2025-12-18 12:17:36] 2025-12-18 17:16:17,252 | INFO     | chi2: 4.10064148023305
[2025-12-18 12:17:36] 2025-12-18 17:16:17,252 | INFO     | current chi2=4.10064148023305 (change=15.756400003054624 %)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,253 | INFO     | right removable region: 702
[2025-12-18 12:17:36] 2025-12-18 17:16:17,253 | INFO     | sum of square deviations: 107721598373.83784
[2025-12-18 12:17:36] 2025-12-18 17:16:17,262 | INFO     | sum of deviations: 356062147111.26984
[2025-12-18 12:17:36] 2025-12-18 17:16:17,262 | INFO     | mean x: 1766056742.8108108
[2025-12-18 12:17:36] 2025-12-18 17:16:17,262 | INFO     | mean y: 2057134.385490754
[2025-12-18 12:17:36] 2025-12-18 17:16:17,263 | INFO     | intersect: -5835453311.600194
[2025-12-18 12:17:36] 2025-12-18 17:16:17,263 | INFO     | chi2: 2.4809575867294615
[2025-12-18 12:17:36] 2025-12-18 17:16:17,263 | INFO     | current chi2=2.4809575867294615 (change=49.031194374509084 %)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,264 | INFO     | sum of square deviations: 105439175127.91411
[2025-12-18 12:17:36] 2025-12-18 17:16:17,272 | INFO     | sum of deviations: 292630679013.9712
[2025-12-18 12:17:36] 2025-12-18 17:16:17,273 | INFO     | mean x: 1766056895.312321
[2025-12-18 12:17:36] 2025-12-18 17:16:17,273 | INFO     | mean y: 2061371.770773639
[2025-12-18 12:17:36] 2025-12-18 17:16:17,273 | INFO     | intersect: -4899365710.009681
[2025-12-18 12:17:36] 2025-12-18 17:16:17,274 | INFO     | chi2: 2.118655815018932
[2025-12-18 12:17:36] 2025-12-18 17:16:17,274 | INFO     | current chi2=2.118655815018932 (change=14.603303726289669 %)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,274 | INFO     | left removable region: 20
[2025-12-18 12:17:36] 2025-12-18 17:16:17,274 | INFO     | sum of square deviations: 98353041542.09967
[2025-12-18 12:17:36] 2025-12-18 17:16:17,283 | INFO     | sum of deviations: 221263564526.5514
[2025-12-18 12:17:36] 2025-12-18 17:16:17,287 | INFO     | mean x: 1766057017.3108504
[2025-12-18 12:17:36] 2025-12-18 17:16:17,287 | INFO     | mean y: 2070190.6011730204
[2025-12-18 12:17:36] 2025-12-18 17:16:17,287 | INFO     | intersect: -3971005422.317855
[2025-12-18 12:17:36] 2025-12-18 17:16:17,288 | INFO     | chi2: 0.8800044410178264
[2025-12-18 12:17:36] 2025-12-18 17:16:17,288 | INFO     | current memory leak: 2.25 B/s (using 682 data points, chi2=0.88)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,289 | INFO     | could have reported an average CPU frequency of 2867 MHz (27 samples)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,289 | INFO     | ..............................
[2025-12-18 12:17:36] 2025-12-18 17:16:17,289 | INFO     | . Timing measurements:
[2025-12-18 12:17:36] 2025-12-18 17:16:17,289 | INFO     | . get job = 0 s
[2025-12-18 12:17:36] 2025-12-18 17:16:17,289 | INFO     | . initial setup = 6 s
[2025-12-18 12:17:36] 2025-12-18 17:16:17,290 | INFO     | . payload setup = 37 s
[2025-12-18 12:17:36] 2025-12-18 17:16:17,290 | INFO     | . stage-in = 0 s
[2025-12-18 12:17:36] 2025-12-18 17:16:17,290 | INFO     | . payload execution = 43164 s
[2025-12-18 12:17:36] 2025-12-18 17:16:17,290 | INFO     | . stage-out = 2 s
[2025-12-18 12:17:36] 2025-12-18 17:16:17,290 | INFO     | . log creation = 0 s
[2025-12-18 12:17:36] 2025-12-18 17:16:17,290 | INFO     | ..............................
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | 
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | job summary report
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | --------------------------------------------------
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | PanDA job id: 6932713680
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | task id: 47898763
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | errors: (none)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | pilot state: finished 
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | transexitcode: 0
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | exeerrorcode: 0
[2025-12-18 12:17:36] 2025-12-18 17:16:17,741 | INFO     | exeerrordiag: 
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | exitcode: 0
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | exitmsg: OK
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | cpuconsumptiontime: 56185 s
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | nevents: 400
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | neventsw: 0
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | pid: 2806601
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | pgrp: 2806601
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | corecount: 8
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | event service: False
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | sizes: {0: 2283130, 1: 2283815, 2: 2284014, 13: 2284014, 24: 2284070, 35: 2284098, 36: 2284516, 45: 2284544, 43206: 2327749, 43208: 2336803, 43213: 2336941}
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | --------------------------------------------------
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | 
[2025-12-18 12:17:36] 2025-12-18 17:16:17,742 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-18 12:17:36] 2025-12-18 17:16:17,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 12:17:36] 2025-12-18 17:16:17,761 | INFO     | job 6932713680 has completed (purged errors)
[2025-12-18 12:17:36] 2025-12-18 17:16:17,761 | INFO     | overall cleanup function is called
[2025-12-18 12:17:36] 2025-12-18 17:16:18,768 | INFO     | --- collectZombieJob: --- 10, [2806601]
[2025-12-18 12:17:36] 2025-12-18 17:16:18,769 | INFO     | zombie collector waiting for pid 2806601
[2025-12-18 12:17:36] 2025-12-18 17:16:18,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 12:17:36] 2025-12-18 17:16:18,769 | INFO     | collected zombie processes
[2025-12-18 12:17:36] 2025-12-18 17:16:18,769 | INFO     | will attempt to kill all subprocesses of pid=2806601
[2025-12-18 12:17:36] 2025-12-18 17:16:19,069 | INFO     | process IDs to be killed: [2806601] (in reverse order)
[2025-12-18 12:17:36] 2025-12-18 17:16:19,206 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 12:17:36] 2025-12-18 17:16:19,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 12:17:36] 2025-12-18 17:16:19,233 | INFO     | did not find any defunct processes belonging to 2806601
[2025-12-18 12:17:36] 2025-12-18 17:16:19,248 | INFO     | did not find any defunct processes belonging to 2806601
[2025-12-18 12:17:36] 2025-12-18 17:16:19,249 | INFO     | ready for new job
[2025-12-18 12:17:36] 2025-12-18 17:16:19,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 12:17:36] 2025-12-18 17:16:19,252 | INFO     | ***************************************
[2025-12-18 12:17:36] 2025-12-18 17:16:19,252 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 12:17:36] 2025-12-18 17:16:19,252 | INFO     | ***************************************
[2025-12-18 12:17:36] 2025-12-18 17:16:19,252 | INFO     | 
[2025-12-18 12:17:36] 2025-12-18 17:16:19,268 | INFO     | architecture information:
[2025-12-18 12:17:36] 2025-12-18 17:16:19,269 | INFO     | executing command: cat /etc/os-release
[2025-12-18 12:17:36] 2025-12-18 17:16:19,288 | INFO     | cat /etc/os-release:
[2025-12-18 12:17:36] NAME="CentOS Linux"
[2025-12-18 12:17:36] VERSION="7 (Core)"
[2025-12-18 12:17:36] ID="centos"
[2025-12-18 12:17:36] ID_LIKE="rhel fedora"
[2025-12-18 12:17:36] VERSION_ID="7"
[2025-12-18 12:17:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 12:17:36] ANSI_COLOR="0;31"
[2025-12-18 12:17:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 12:17:36] HOME_URL="https://www.centos.org/"
[2025-12-18 12:17:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 12:17:36] 
[2025-12-18 12:17:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 12:17:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 12:17:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 12:17:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 12:17:36] 
[2025-12-18 12:17:36] 2025-12-18 17:16:19,289 | INFO     | ***************************************
[2025-12-18 12:17:36] 2025-12-18 17:16:19,791 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-18 12:17:36] 2025-12-18 17:16:19,805 | INFO     | sufficient remaining disk space (75425120256 B)
[2025-12-18 12:17:36] 2025-12-18 17:16:19,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 12:17:36] 2025-12-18 17:16:19,805 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 12:17:36] 2025-12-18 17:16:19,805 | INFO     | update_server=False
[2025-12-18 12:17:36] 2025-12-18 17:16:19,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 12:17:36] 2025-12-18 17:16:19,839 | INFO     | all data control threads have been joined
[2025-12-18 12:17:36] 2025-12-18 17:16:19,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 12:17:36] 2025-12-18 17:16:19,917 | INFO     | aborting loop
[2025-12-18 12:17:36] 2025-12-18 17:16:20,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 12:17:36] 2025-12-18 17:16:20,465 | INFO     | all payload control threads have been joined
[2025-12-18 12:17:36] 2025-12-18 17:16:20,811 | INFO     | [job] retrieve thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:20,845 | INFO     | [data] control thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:20,871 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:20,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:20,922 | INFO     | [job] job monitor thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:20,948 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:20,972 | INFO     | [data] copytool_in thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:21,125 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:21,210 | INFO     | [payload] failed_post thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:21,217 | INFO     | all job control threads have been joined
[2025-12-18 12:17:36] 2025-12-18 17:16:21,471 | INFO     | [payload] control thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:21,927 | INFO     | [payload] validate_post thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:22,091 | INFO     | [data] copytool_out thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:22,223 | INFO     | [job] control thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:22,299 | INFO     | [job] validate thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:22,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 12:17:36] 2025-12-18 17:16:22,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 12:17:36] 2025-12-18 17:16:23,395 | INFO     | [job] queue monitor thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:26,687 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 12:17:36] 2025-12-18 17:16:50,665 | INFO     | PID=2790387 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 12:17:36] 2025-12-18 17:16:50,665 | INFO     | .. there are 23 such processes running
[2025-12-18 12:17:36] 2025-12-18 17:16:50,665 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 12:17:36] 2025-12-18 17:16:50,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 12:17:36] 2025-12-18 17:16:50,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 12:17:36] 2025-12-18 17:17:05,042 | INFO     | [monitor] cgroup control has ended
[2025-12-18 12:17:36] 2025-12-18 17:17:05,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504110593856)>', '<ExcThread(monitor, started 140503479744256)>']
[2025-12-18 12:17:36] 2025-12-18 17:17:06,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 12:17:36] 2025-12-18 17:17:06,752 | INFO     | [monitor] control thread has ended
[2025-12-18 12:17:36] 2025-12-18 17:17:10,954 | INFO     | all workflow threads have been joined
[2025-12-18 12:17:36] 2025-12-18 17:17:10,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 12:17:36] 2025-12-18 17:17:10,954 | INFO     | traces error code: 0
[2025-12-18 12:17:36] 2025-12-18 17:17:10,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 12:17:36] 2025-12-18 17:17:11,102 [wrapper] ==== pilot stdout END ====
[2025-12-18 12:17:36] 2025-12-18 17:17:11,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 12:17:36] 2025-12-18 17:17:11,107 [wrapper] pilotpid: 2790387
[2025-12-18 12:17:36] 2025-12-18 17:17:11,109 [wrapper] Pilot exit status: 0
[2025-12-18 12:17:36] 2025-12-18 17:17:11,119 [wrapper] pandaids: 6932713680
[2025-12-18 12:17:36] 2025-12-18 17:17:11,188 [wrapper] cleanup supervisor_pilot 1064566 2790388
[2025-12-18 12:17:36] 2025-12-18 17:17:11,191 [wrapper] Test setup, not cleaning
[2025-12-18 12:17:36] 2025-12-18 17:17:11,195 [wrapper] apfmon messages muted
[2025-12-18 12:17:36] 2025-12-18 17:17:11,198 [wrapper] ==== wrapper stdout END ====
[2025-12-18 12:17:36] 2025-12-18 17:17:11,201 [wrapper] ==== wrapper stderr END ====
[2025-12-18 12:17:36]  *** Error codes and diagnostics ***
[2025-12-18 12:17:36]     "exeErrorCode": 0,
[2025-12-18 12:17:36]     "exeErrorDiag": "",
[2025-12-18 12:17:36]     "pilotErrorCode": 0,
[2025-12-18 12:17:36]     "pilotErrorDiag": "",
[2025-12-18 12:17:36]  *** Listing of results directory ***
[2025-12-18 12:17:36] total 445548
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 19:45 queuedata.json
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 19:45 pilot3.tar.gz
[2025-12-18 12:17:36] -rwx------. 1 boincer umatlas     36322 Dec 17 19:46 runpilot2-wrapper.sh
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas       100 Dec 18 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 12:17:36] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 18 00:13 run_atlas
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas       105 Dec 18 00:13 job.xml
[2025-12-18 12:17:36] -rw-r--r--. 2 boincer umatlas 222648947 Dec 18 00:13 EVNT.47898761._000841.pool.root.1
[2025-12-18 12:17:36] -rw-r--r--. 2 boincer umatlas     15847 Dec 18 00:13 start_atlas.sh
[2025-12-18 12:17:36] drwxrwx--x. 2 boincer umatlas      4096 Dec 18 00:13 shared
[2025-12-18 12:17:36] -rw-r--r--. 2 boincer umatlas    592406 Dec 18 00:13 input.tar.gz
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas         0 Dec 18 00:13 boinc_lockfile
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas      2508 Dec 18 00:13 pandaJob.out
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas        57 Dec 18 00:13 setup.sh.local
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas    988110 Dec 18 00:14 agis_schedconf.cvmfs.json
[2025-12-18 12:17:36] drwx------. 5 boincer umatlas      4096 Dec 18 00:14 pilot3
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas      6843 Dec 18 12:12 init_data.xml
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas       531 Dec 18 12:15 boinc_task_state.xml
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas 218131202 Dec 18 12:15 HITS.47898763._021865.pool.root.1
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas        95 Dec 18 12:15 pilot_heartbeat.json
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas      1041 Dec 18 12:16 memory_monitor_summary.json
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas   1516240 Dec 18 12:16 agis_ddmendpoints.agis.ALL.json
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas    810109 Dec 18 12:16 log.47898763._021865.job.log.tgz.1
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas      7827 Dec 18 12:16 heartbeat.json
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas      4824 Dec 18 12:17 pilotlog.txt
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas   4963961 Dec 18 12:17 log.47898763._021865.job.log.1
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas       357 Dec 18 12:17 output.list
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas       620 Dec 18 12:17 runtime_log
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas   5795840 Dec 18 12:17 result.tar.gz
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas      9348 Dec 18 12:17 runtime_log.err
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas       659 Dec 18 12:17 nonNDmzKHq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkRYKDmJV2LDo.diag
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas      8192 Dec 18 12:17 boinc_mmap_file
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas     21507 Dec 18 12:17 stderr.txt
[2025-12-18 12:17:36] -rw-r--r--. 1 boincer umatlas        28 Dec 18 12:17 wrapper_checkpoint.txt
[2025-12-18 12:17:36] HITS file was successfully produced:
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas 218131202 Dec 18 12:15 shared/HITS.pool.root.1
[2025-12-18 12:17:36]  *** Contents of shared directory: ***
[2025-12-18 12:17:36] total 436712
[2025-12-18 12:17:36] -rw-r--r--. 2 boincer umatlas 222648947 Dec 18 00:13 ATLAS.root_0
[2025-12-18 12:17:36] -rw-r--r--. 2 boincer umatlas     15847 Dec 18 00:13 start_atlas.sh
[2025-12-18 12:17:36] -rw-r--r--. 2 boincer umatlas    592406 Dec 18 00:13 input.tar.gz
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas 218131202 Dec 18 12:15 HITS.pool.root.1
[2025-12-18 12:17:36] -rw-------. 1 boincer umatlas   5795840 Dec 18 12:17 result.tar.gz
12:17:38 (2778864): run_atlas exited; CPU time 57651.432642
12:17:38 (2778864): called boinc_finish(0)

</stderr_txt>
]]>

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