Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:09:42 (3039682): wrapper (7.7.26015): starting
10:09:42 (3039682): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 10:09:42] Arguments: --nthreads 4
[2025-12-18 10:09:42] Threads: 4
[2025-12-18 10:09:42] Checking for CVMFS
[2025-12-18 10:09:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 10:09:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 10:09:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 10:09:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 10:09:42] 2.11.5.0 5819 7437 107056 154153 0 188 3786909 4096000 6454 130560 0 31817298 99.983 582900 6203 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-18 10:09:42] CVMFS is ok
[2025-12-18 10:09:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 10:09:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-18 10:09:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-18 10:09:42] Further information can be found at the LHC@home message board.
[2025-12-18 10:09:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 10:09:42] Checking for apptainer binary...
[2025-12-18 10:09:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 10:09:42] Running /usr/bin/apptainer --version
[2025-12-18 10:09:42] apptainer version 1.4.5
[2025-12-18 10:09:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 10:09:42] x32-linux3
[2025-12-18 10:09:42] apptainer works
[2025-12-18 10:09:42] Set ATHENA_PROC_NUMBER=4
[2025-12-18 10:09:42] Set ATHENA_CORE_NUMBER=4
[2025-12-18 10:09:42] Starting ATLAS job with PandaID=6932316395
[2025-12-18 10:09:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 13:10:14]  *** The last 200 lines of the pilot log: ***
[2025-12-18 13:10:14] 2025-12-18 18:09:25,983 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 13:10:14] 2025-12-18 18:09:25,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 13:10:14] 2025-12-18 18:09:25,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 13:10:14] 2025-12-18 18:09:25,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 13:10:14] 2025-12-18 18:09:25,985 | INFO     | fitting pss+swap vs Time
[2025-12-18 13:10:14] 2025-12-18 18:09:25,986 | INFO     | sum of square deviations: 1719429448.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,986 | INFO     | sum of deviations: 8553806983.999996
[2025-12-18 13:10:14] 2025-12-18 18:09:25,986 | INFO     | mean x: 1766075982.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,987 | INFO     | mean y: 2292968.4971751412
[2025-12-18 13:10:14] 2025-12-18 18:09:25,987 | INFO     | intersect: -8783570904.357845
[2025-12-18 13:10:14] 2025-12-18 18:09:25,987 | INFO     | chi2: 1.8543281875218707
[2025-12-18 13:10:14] 2025-12-18 18:09:25,987 | INFO     | sum of square deviations: 1577789583.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,988 | INFO     | sum of deviations: 18954319550.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,988 | INFO     | mean x: 1766075829.5
[2025-12-18 13:10:14] 2025-12-18 18:09:25,988 | INFO     | mean y: 2303900.1860465114
[2025-12-18 13:10:14] 2025-12-18 18:09:25,988 | INFO     | intersect: -21213938102.264996
[2025-12-18 13:10:14] 2025-12-18 18:09:25,988 | INFO     | chi2: 1.08258764543909
[2025-12-18 13:10:14] 2025-12-18 18:09:25,988 | INFO     | current chi2=1.08258764543909 (change=41.61833634822415 %)
[2025-12-18 13:10:14] 2025-12-18 18:09:25,988 | INFO     | sum of square deviations: 1444149868.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,989 | INFO     | sum of deviations: 18336018365.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,989 | INFO     | mean x: 1766075677.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,989 | INFO     | mean y: 2303194.119760479
[2025-12-18 13:10:14] 2025-12-18 18:09:25,989 | INFO     | intersect: -22421128587.443653
[2025-12-18 13:10:14] 2025-12-18 18:09:25,990 | INFO     | chi2: 1.0831919975802686
[2025-12-18 13:10:14] 2025-12-18 18:09:25,990 | INFO     | current chi2=1.0831919975802686 (change=-0.055824777210863985 %)
[2025-12-18 13:10:14] 2025-12-18 18:09:25,990 | INFO     | right removable region: 166
[2025-12-18 13:10:14] 2025-12-18 18:09:25,990 | INFO     | sum of square deviations: 1577789583.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,991 | INFO     | sum of deviations: -8414356683.5
[2025-12-18 13:10:14] 2025-12-18 18:09:25,991 | INFO     | mean x: 1766076134.5
[2025-12-18 13:10:14] 2025-12-18 18:09:25,991 | INFO     | mean y: 2310935.5290697673
[2025-12-18 13:10:14] 2025-12-18 18:09:25,991 | INFO     | intersect: 9420800375.448208
[2025-12-18 13:10:14] 2025-12-18 18:09:25,991 | INFO     | chi2: 0.7929772020791326
[2025-12-18 13:10:14] 2025-12-18 18:09:25,991 | INFO     | current chi2=0.7929772020791326 (change=57.236415462202 %)
[2025-12-18 13:10:14] 2025-12-18 18:09:25,991 | INFO     | sum of square deviations: 1444149868.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,992 | INFO     | sum of deviations: -7063902968.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,992 | INFO     | mean x: 1766076287.0
[2025-12-18 13:10:14] 2025-12-18 18:09:25,992 | INFO     | mean y: 2309389.916167665
[2025-12-18 13:10:14] 2025-12-18 18:09:25,992 | INFO     | intersect: 8640880636.493826
[2025-12-18 13:10:14] 2025-12-18 18:09:25,992 | INFO     | chi2: 0.7912738903166687
[2025-12-18 13:10:14] 2025-12-18 18:09:25,992 | INFO     | current chi2=0.7912738903166687 (change=0.2147995879324004 %)
[2025-12-18 13:10:14] 2025-12-18 18:09:25,993 | INFO     | left removable region: 20
[2025-12-18 13:10:14] 2025-12-18 18:09:25,993 | INFO     | sum of square deviations: 964976232.5
[2025-12-18 13:10:14] 2025-12-18 18:09:25,993 | INFO     | sum of deviations: 1845584706.9999998
[2025-12-18 13:10:14] 2025-12-18 18:09:25,993 | INFO     | mean x: 1766076256.5
[2025-12-18 13:10:14] 2025-12-18 18:09:25,993 | INFO     | mean y: 2322950.5616438356
[2025-12-18 13:10:14] 2025-12-18 18:09:25,993 | INFO     | intersect: -3375421723.986295
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | chi2: 0.00047319604518815113
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | current memory leak: 1.91 B/s (using 146 data points, chi2=0.00)
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | could have reported an average CPU frequency of 3884 MHz (9 samples)
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | ..............................
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | . Timing measurements:
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | . get job = 0 s
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | . initial setup = 2 s
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | . payload setup = 4 s
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | . stage-in = 0 s
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | . payload execution = 10749 s
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | . stage-out = 0 s
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | . log creation = 0 s
[2025-12-18 13:10:14] 2025-12-18 18:09:25,994 | INFO     | ..............................
[2025-12-18 13:10:14] 2025-12-18 18:09:26,432 | INFO     | 
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | job summary report
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | --------------------------------------------------
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | PanDA job id: 6932316395
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | task id: 47905899
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | errors: (none)
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | pilot state: finished 
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | transexitcode: 0
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | exeerrorcode: 0
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | exeerrordiag: 
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | exitcode: 0
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | exitmsg: OK
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | cpuconsumptiontime: 41550 s
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | nevents: 400
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | neventsw: 0
[2025-12-18 13:10:14] 2025-12-18 18:09:26,433 | INFO     | pid: 3050180
[2025-12-18 13:10:14] 2025-12-18 18:09:26,434 | INFO     | pgrp: 3050180
[2025-12-18 13:10:14] 2025-12-18 18:09:26,434 | INFO     | corecount: 4
[2025-12-18 13:10:14] 2025-12-18 18:09:26,434 | INFO     | event service: False
[2025-12-18 13:10:14] 2025-12-18 18:09:26,434 | INFO     | sizes: {0: 2283921, 3: 2284183, 11: 2284211, 10757: 2322322, 10758: 2322322, 10761: 2322580}
[2025-12-18 13:10:14] 2025-12-18 18:09:26,434 | INFO     | --------------------------------------------------
[2025-12-18 13:10:14] 2025-12-18 18:09:26,434 | INFO     | 
[2025-12-18 13:10:14] 2025-12-18 18:09:26,434 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-12-18 13:10:14] 2025-12-18 18:09:26,450 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,450 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,450 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | job 6932316395 has completed (purged errors)
[2025-12-18 13:10:14] 2025-12-18 18:09:26,451 | INFO     | overall cleanup function is called
[2025-12-18 13:10:14] 2025-12-18 18:09:26,811 | WARNING  | process 3050180 can no longer be monitored (due to stat problems) - aborting
[2025-12-18 13:10:14] 2025-12-18 18:09:26,876 | INFO     | using path: /var/lib/boinc-client/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 13:10:14] 2025-12-18 18:09:26,966 | INFO     | number of running child processes to parent process 3050180: 1
[2025-12-18 13:10:14] 2025-12-18 18:09:26,966 | INFO     | maximum number of monitored processes: 6
[2025-12-18 13:10:14] 2025-12-18 18:09:26,966 | INFO     | aborting job monitoring since job object (job id=6932316395) has expired
[2025-12-18 13:10:14] 2025-12-18 18:09:27,456 | INFO     | --- collectZombieJob: --- 10, [3050180]
[2025-12-18 13:10:14] 2025-12-18 18:09:27,457 | INFO     | zombie collector waiting for pid 3050180
[2025-12-18 13:10:14] 2025-12-18 18:09:27,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 13:10:14] 2025-12-18 18:09:27,457 | INFO     | collected zombie processes
[2025-12-18 13:10:14] 2025-12-18 18:09:27,457 | INFO     | will attempt to kill all subprocesses of pid=3050180
[2025-12-18 13:10:14] 2025-12-18 18:09:27,604 | INFO     | process IDs to be killed: [3050180] (in reverse order)
[2025-12-18 13:10:14] 2025-12-18 18:09:27,656 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 13:10:14] 2025-12-18 18:09:27,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 13:10:14] 2025-12-18 18:09:27,660 | INFO     | did not find any defunct processes belonging to 3050180
[2025-12-18 13:10:14] 2025-12-18 18:09:27,663 | INFO     | did not find any defunct processes belonging to 3050180
[2025-12-18 13:10:14] 2025-12-18 18:09:27,664 | INFO     | ready for new job
[2025-12-18 13:10:14] 2025-12-18 18:09:27,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 13:10:14] 2025-12-18 18:09:27,665 | INFO     | ***************************************
[2025-12-18 13:10:14] 2025-12-18 18:09:27,665 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 13:10:14] 2025-12-18 18:09:27,665 | INFO     | ***************************************
[2025-12-18 13:10:14] 2025-12-18 18:09:27,665 | INFO     | 
[2025-12-18 13:10:14] 2025-12-18 18:09:27,686 | INFO     | architecture information:
[2025-12-18 13:10:14] 2025-12-18 18:09:27,686 | INFO     | executing command: cat /etc/os-release
[2025-12-18 13:10:14] 2025-12-18 18:09:27,701 | INFO     | cat /etc/os-release:
[2025-12-18 13:10:14] NAME="CentOS Linux"
[2025-12-18 13:10:14] VERSION="7 (Core)"
[2025-12-18 13:10:14] ID="centos"
[2025-12-18 13:10:14] ID_LIKE="rhel fedora"
[2025-12-18 13:10:14] VERSION_ID="7"
[2025-12-18 13:10:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 13:10:14] ANSI_COLOR="0;31"
[2025-12-18 13:10:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 13:10:14] HOME_URL="https://www.centos.org/"
[2025-12-18 13:10:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 13:10:14] 
[2025-12-18 13:10:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 13:10:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 13:10:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 13:10:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 13:10:14] 
[2025-12-18 13:10:14] 2025-12-18 18:09:27,702 | INFO     | ***************************************
[2025-12-18 13:10:14] 2025-12-18 18:09:28,204 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-12-18 13:10:14] 2025-12-18 18:09:28,220 | INFO     | sufficient remaining disk space (390917521408 B)
[2025-12-18 13:10:14] 2025-12-18 18:09:28,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 13:10:14] 2025-12-18 18:09:28,220 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 13:10:14] 2025-12-18 18:09:28,221 | INFO     | update_server=False
[2025-12-18 13:10:14] 2025-12-18 18:09:28,221 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 13:10:14] 2025-12-18 18:09:28,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 13:10:14] 2025-12-18 18:09:28,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 13:10:14] 2025-12-18 18:09:28,221 | INFO     | aborting loop
[2025-12-18 13:10:14] 2025-12-18 18:09:28,792 | INFO     | all payload control threads have been joined
[2025-12-18 13:10:14] 2025-12-18 18:09:28,864 | INFO     | all data control threads have been joined
[2025-12-18 13:10:14] 2025-12-18 18:09:29,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 13:10:14] 2025-12-18 18:09:29,224 | INFO     | [job] job monitor thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:29,225 | INFO     | [job] retrieve thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:29,404 | INFO     | [job] validate thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:29,408 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:29,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:29,504 | INFO     | [payload] failed_post thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:29,584 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:29,800 | INFO     | [payload] control thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:29,868 | INFO     | all job control threads have been joined
[2025-12-18 13:10:14] 2025-12-18 18:09:29,870 | INFO     | [data] control thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:29,876 | INFO     | [data] copytool_in thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:30,216 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:30,224 | INFO     | [data] copytool_out thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:30,764 | INFO     | [payload] validate_post thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:30,872 | INFO     | [job] control thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:31,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 13:10:14] 2025-12-18 18:09:32,070 | INFO     | [job] queue monitor thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:33,058 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 13:10:14] 2025-12-18 18:09:50,815 [wrapper] supervise_pilot (15 min periods counter: 13)
[2025-12-18 13:10:14] 2025-12-18 18:09:57,894 | INFO     | PID=3043523 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 13:10:14] 2025-12-18 18:09:57,894 | INFO     | .. there are 8 such processes running
[2025-12-18 13:10:14] 2025-12-18 18:09:57,895 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 13:10:14] 2025-12-18 18:09:57,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 13:10:14] 2025-12-18 18:09:57,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 13:10:14] 2025-12-18 18:10:08,440 | INFO     | [monitor] cgroup control has ended
[2025-12-18 13:10:14] 2025-12-18 18:10:09,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140632604960576)>', '<ExcThread(monitor, started 140631791892224)>']
[2025-12-18 13:10:14] 2025-12-18 18:10:09,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 13:10:14] 2025-12-18 18:10:09,949 | INFO     | [monitor] control thread has ended
[2025-12-18 13:10:14] 2025-12-18 18:10:14,576 | INFO     | all workflow threads have been joined
[2025-12-18 13:10:14] 2025-12-18 18:10:14,577 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 13:10:14] 2025-12-18 18:10:14,577 | INFO     | traces error code: 0
[2025-12-18 13:10:14] 2025-12-18 18:10:14,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 13:10:14] 2025-12-18 18:10:14,664 [wrapper] ==== pilot stdout END ====
[2025-12-18 13:10:14] 2025-12-18 18:10:14,667 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 13:10:14] 2025-12-18 18:10:14,669 [wrapper] pilotpid: 3043523
[2025-12-18 13:10:14] 2025-12-18 18:10:14,671 [wrapper] Pilot exit status: 0
[2025-12-18 13:10:14] 2025-12-18 18:10:14,679 [wrapper] pandaids: 6932316395
[2025-12-18 13:10:14] 2025-12-18 18:10:14,711 [wrapper] cleanup supervisor_pilot 3309417 3043524
[2025-12-18 13:10:14] 2025-12-18 18:10:14,713 [wrapper] Test setup, not cleaning
[2025-12-18 13:10:14] 2025-12-18 18:10:14,715 [wrapper] apfmon messages muted
[2025-12-18 13:10:14] 2025-12-18 18:10:14,718 [wrapper] ==== wrapper stdout END ====
[2025-12-18 13:10:14] 2025-12-18 18:10:14,720 [wrapper] ==== wrapper stderr END ====
[2025-12-18 13:10:14]  *** Error codes and diagnostics ***
[2025-12-18 13:10:14]     "exeErrorCode": 0,
[2025-12-18 13:10:14]     "exeErrorDiag": "",
[2025-12-18 13:10:14]     "pilotErrorCode": 0,
[2025-12-18 13:10:14]     "pilotErrorDiag": "",
[2025-12-18 13:10:14]  *** Listing of results directory ***
[2025-12-18 13:10:14] total 406656
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc    579449 Dec 17 03:37 pilot3.tar.gz
[2025-12-18 13:10:14] -rwx------ 1 boinc boinc     36322 Dec 17 03:38 runpilot2-wrapper.sh
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc      5112 Dec 17 03:38 queuedata.json
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc       100 Dec 18 10:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 13:10:14] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 10:09 run_atlas
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc       105 Dec 18 10:09 job.xml
[2025-12-18 13:10:14] -rw-r--r-- 2 boinc boinc     15847 Dec 18 10:09 start_atlas.sh
[2025-12-18 13:10:14] drwxrwx--x 2 boinc boinc      4096 Dec 18 10:09 shared
[2025-12-18 13:10:14] -rw-r--r-- 2 boinc boinc    592382 Dec 18 10:09 input.tar.gz
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc      9157 Dec 18 10:09 init_data.xml
[2025-12-18 13:10:14] -rw-r--r-- 2 boinc boinc 202361513 Dec 18 10:09 EVNT.47905897._000018.pool.root.1
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc         0 Dec 18 10:09 boinc_setup_complete
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc         0 Dec 18 10:09 boinc_lockfile
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc      2482 Dec 18 10:09 pandaJob.out
[2025-12-18 13:10:14] -rw------- 1 boinc boinc    988133 Dec 18 10:09 agis_schedconf.cvmfs.json
[2025-12-18 13:10:14] -rw------- 1 boinc boinc   1516240 Dec 18 10:09 agis_ddmendpoints.agis.ALL.json
[2025-12-18 13:10:14] drwx------ 5 boinc boinc      4096 Dec 18 10:09 pilot3
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc       531 Dec 18 13:08 boinc_task_state.xml
[2025-12-18 13:10:14] -rw------- 1 boinc boinc 206382830 Dec 18 13:08 HITS.47905899._000427.pool.root.1
[2025-12-18 13:10:14] -rw------- 1 boinc boinc      1026 Dec 18 13:09 memory_monitor_summary.json
[2025-12-18 13:10:14] -rw------- 1 boinc boinc    335298 Dec 18 13:09 log.47905899._000427.job.log.tgz.1
[2025-12-18 13:10:14] -rw------- 1 boinc boinc      7739 Dec 18 13:09 heartbeat.json
[2025-12-18 13:10:14] -rw------- 1 boinc boinc        95 Dec 18 13:09 pilot_heartbeat.json
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc        28 Dec 18 13:10 wrapper_checkpoint.txt
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc      8192 Dec 18 13:10 boinc_mmap_file
[2025-12-18 13:10:14] -rw------- 1 boinc boinc      4831 Dec 18 13:10 pilotlog.txt
[2025-12-18 13:10:14] -rw------- 1 boinc boinc   1541867 Dec 18 13:10 log.47905899._000427.job.log.1
[2025-12-18 13:10:14] -rw------- 1 boinc boinc       357 Dec 18 13:10 output.list
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc       620 Dec 18 13:10 runtime_log
[2025-12-18 13:10:14] -rw------- 1 boinc boinc   1894400 Dec 18 13:10 result.tar.gz
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc      8893 Dec 18 13:10 runtime_log.err
[2025-12-18 13:10:14] -rw------- 1 boinc boinc       646 Dec 18 13:10 FSBLDmBE2p8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4CXKDm7DHbZn.diag
[2025-12-18 13:10:14] -rw-r--r-- 1 boinc boinc     21136 Dec 18 13:10 stderr.txt
[2025-12-18 13:10:14] HITS file was successfully produced:
[2025-12-18 13:10:14] -rw------- 1 boinc boinc 206382830 Dec 18 13:08 shared/HITS.pool.root.1
[2025-12-18 13:10:14]  *** Contents of shared directory: ***
[2025-12-18 13:10:14] total 401624
[2025-12-18 13:10:14] -rw-r--r-- 2 boinc boinc     15847 Dec 18 10:09 start_atlas.sh
[2025-12-18 13:10:14] -rw-r--r-- 2 boinc boinc    592382 Dec 18 10:09 input.tar.gz
[2025-12-18 13:10:14] -rw-r--r-- 2 boinc boinc 202361513 Dec 18 10:09 ATLAS.root_0
[2025-12-18 13:10:14] -rw------- 1 boinc boinc 206382830 Dec 18 13:08 HITS.pool.root.1
[2025-12-18 13:10:14] -rw------- 1 boinc boinc   1894400 Dec 18 13:10 result.tar.gz
13:10:16 (3039682): run_atlas exited; CPU time 41673.085670
13:10:16 (3039682): called boinc_finish(0)

</stderr_txt>
]]>

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