Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:53:50 (10646): wrapper (7.7.26015): starting
23:53:50 (10646): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 23:53:50] Arguments: --nthreads 8
[2025-12-17 23:53:50] Threads: 8
[2025-12-17 23:53:50] Checking for CVMFS
[2025-12-17 23:53:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 23:53:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 23:53:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 23:53:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 23:53:50] 2.11.2.0 18601 133091 140448 154134 1 188 10464577 18432000 1833 130560 0 94263992 99.985 4949444 31737 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 23:53:50] CVMFS is ok
[2025-12-17 23:53:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 23:53:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 23:53:50] Further information can be found at the LHC@home message board.
[2025-12-17 23:53:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 23:53:50] Checking for apptainer binary...
[2025-12-17 23:53:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 23:53:50] Running /usr/bin/apptainer --version
[2025-12-17 23:53:50] apptainer version 1.3.2-1.el7
[2025-12-17 23:53:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 23:53:51] c-206-13.aglt2.org
[2025-12-17 23:53:51] apptainer works
[2025-12-17 23:53:51] Set ATHENA_PROC_NUMBER=8
[2025-12-17 23:53:51] Set ATHENA_CORE_NUMBER=8
[2025-12-17 23:53:51] Starting ATLAS job with PandaID=6932560913
[2025-12-17 23:53:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 03:17:28]  *** The last 200 lines of the pilot log: ***
[2025-12-18 03:17:28] 2025-12-18 08:16:33,239 | INFO     | mean y: 2444866.904522613
[2025-12-18 03:17:28] 2025-12-18 08:16:33,239 | INFO     | intersect: -28105849521.57343
[2025-12-18 03:17:28] 2025-12-18 08:16:33,240 | INFO     | chi2: 1.4276266299973606
[2025-12-18 03:17:28] 2025-12-18 08:16:33,240 | INFO     | sum of square deviations: 2263977332.5
[2025-12-18 03:17:28] 2025-12-18 08:16:33,241 | INFO     | sum of deviations: 37799788656.50001
[2025-12-18 03:17:28] 2025-12-18 08:16:33,241 | INFO     | mean x: 1766039553.5
[2025-12-18 03:17:28] 2025-12-18 08:16:33,241 | INFO     | mean y: 2443938.881443299
[2025-12-18 03:17:28] 2025-12-18 08:16:33,241 | INFO     | intersect: -29483682500.20455
[2025-12-18 03:17:28] 2025-12-18 08:16:33,241 | INFO     | chi2: 1.4277879023412883
[2025-12-18 03:17:28] 2025-12-18 08:16:33,242 | INFO     | current chi2=1.4277879023412883 (change=-0.011296535140144304 %)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,242 | INFO     | right removable region: 193
[2025-12-18 03:17:28] 2025-12-18 08:16:33,242 | INFO     | sum of square deviations: 2263977332.5
[2025-12-18 03:17:28] 2025-12-18 08:16:33,243 | INFO     | sum of deviations: 8905351997.0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,243 | INFO     | mean x: 1766039858.5
[2025-12-18 03:17:28] 2025-12-18 08:16:33,243 | INFO     | mean y: 2470055.12371134
[2025-12-18 03:17:28] 2025-12-18 08:16:33,243 | INFO     | intersect: -6944245512.610256
[2025-12-18 03:17:28] 2025-12-18 08:16:33,243 | INFO     | chi2: 0.043851668575909455
[2025-12-18 03:17:28] 2025-12-18 08:16:33,244 | INFO     | current chi2=0.043851668575909455 (change=96.92835173745739 %)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,244 | INFO     | sum of square deviations: 2093397390.0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,245 | INFO     | sum of deviations: 2638602579.999998
[2025-12-18 03:17:28] 2025-12-18 08:16:33,245 | INFO     | mean x: 1766040011.0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,245 | INFO     | mean y: 2475658.835978836
[2025-12-18 03:17:28] 2025-12-18 08:16:33,245 | INFO     | intersect: -2223512465.3814807
[2025-12-18 03:17:28] 2025-12-18 08:16:33,245 | INFO     | chi2: 0.010554856312099972
[2025-12-18 03:17:28] 2025-12-18 08:16:33,245 | INFO     | current chi2=0.010554856312099972 (change=75.93054801591191 %)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,246 | INFO     | sum of square deviations: 1931608310.0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,247 | INFO     | sum of deviations: 4575479551.5
[2025-12-18 03:17:28] 2025-12-18 08:16:33,247 | INFO     | mean x: 1766040163.5
[2025-12-18 03:17:28] 2025-12-18 08:16:33,247 | INFO     | mean y: 2473826.972826087
[2025-12-18 03:17:28] 2025-12-18 08:16:33,247 | INFO     | intersect: -4180817688.904928
[2025-12-18 03:17:28] 2025-12-18 08:16:33,247 | INFO     | chi2: 0.005356158032883563
[2025-12-18 03:17:28] 2025-12-18 08:16:33,247 | INFO     | current chi2=0.005356158032883563 (change=49.25408859670291 %)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,248 | INFO     | sum of square deviations: 1778377530.0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,248 | INFO     | sum of deviations: 4966689784.0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,249 | INFO     | mean x: 1766040316.0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,249 | INFO     | mean y: 2473462.0502793295
[2025-12-18 03:17:28] 2025-12-18 08:16:33,249 | INFO     | intersect: -4929760693.882478
[2025-12-18 03:17:28] 2025-12-18 08:16:33,249 | INFO     | chi2: 0.0008577927336834396
[2025-12-18 03:17:28] 2025-12-18 08:16:33,249 | INFO     | current chi2=0.0008577927336834396 (change=83.98492485813314 %)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,249 | INFO     | sum of square deviations: 1633472487.5
[2025-12-18 03:17:28] 2025-12-18 08:16:33,250 | INFO     | sum of deviations: 4268710276.999998
[2025-12-18 03:17:28] 2025-12-18 08:16:33,250 | INFO     | mean x: 1766040468.5
[2025-12-18 03:17:28] 2025-12-18 08:16:33,250 | INFO     | mean y: 2474196.643678161
[2025-12-18 03:17:28] 2025-12-18 08:16:33,251 | INFO     | intersect: -4612672464.945773
[2025-12-18 03:17:28] 2025-12-18 08:16:33,251 | INFO     | chi2: 0.0007513523848126052
[2025-12-18 03:17:28] 2025-12-18 08:16:33,251 | INFO     | current chi2=0.0007513523848126052 (change=12.408632609158383 %)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,251 | INFO     | left removable region: 50
[2025-12-18 03:17:28] 2025-12-18 08:16:33,251 | INFO     | sum of square deviations: 906703512.0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,252 | INFO     | sum of deviations: 1437640131.0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,252 | INFO     | mean x: 1766041048.0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,252 | INFO     | mean y: 2477462.286713287
[2025-12-18 03:17:28] 2025-12-18 08:16:33,252 | INFO     | intersect: -2797700820.9072504
[2025-12-18 03:17:28] 2025-12-18 08:16:33,252 | INFO     | chi2: 0.00014127094336838282
[2025-12-18 03:17:28] 2025-12-18 08:16:33,253 | INFO     | current memory leak: 1.59 B/s (using 143 data points, chi2=0.00)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,253 | INFO     | could have reported an average CPU frequency of 2561 MHz (10 samples)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,254 | INFO     | ..............................
[2025-12-18 03:17:28] 2025-12-18 08:16:33,254 | INFO     | . Timing measurements:
[2025-12-18 03:17:28] 2025-12-18 08:16:33,254 | INFO     | . get job = 0 s
[2025-12-18 03:17:28] 2025-12-18 08:16:33,254 | INFO     | . initial setup = 2 s
[2025-12-18 03:17:28] 2025-12-18 08:16:33,254 | INFO     | . payload setup = 5 s
[2025-12-18 03:17:28] 2025-12-18 08:16:33,254 | INFO     | . stage-in = 0 s
[2025-12-18 03:17:28] 2025-12-18 08:16:33,254 | INFO     | . payload execution = 12119 s
[2025-12-18 03:17:28] 2025-12-18 08:16:33,254 | INFO     | . stage-out = 2 s
[2025-12-18 03:17:28] 2025-12-18 08:16:33,254 | INFO     | . log creation = 0 s
[2025-12-18 03:17:28] 2025-12-18 08:16:33,255 | INFO     | ..............................
[2025-12-18 03:17:28] 2025-12-18 08:16:33,337 | INFO     | 
[2025-12-18 03:17:28] 2025-12-18 08:16:33,337 | INFO     | job summary report
[2025-12-18 03:17:28] 2025-12-18 08:16:33,337 | INFO     | --------------------------------------------------
[2025-12-18 03:17:28] 2025-12-18 08:16:33,337 | INFO     | PanDA job id: 6932560913
[2025-12-18 03:17:28] 2025-12-18 08:16:33,337 | INFO     | task id: 47886933
[2025-12-18 03:17:28] 2025-12-18 08:16:33,338 | INFO     | errors: (none)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,338 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 03:17:28] 2025-12-18 08:16:33,338 | INFO     | pilot state: finished 
[2025-12-18 03:17:28] 2025-12-18 08:16:33,338 | INFO     | transexitcode: 0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,338 | INFO     | exeerrorcode: 0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,338 | INFO     | exeerrordiag: 
[2025-12-18 03:17:28] 2025-12-18 08:16:33,338 | INFO     | exitcode: 0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,338 | INFO     | exitmsg: OK
[2025-12-18 03:17:28] 2025-12-18 08:16:33,338 | INFO     | cpuconsumptiontime: 90521 s
[2025-12-18 03:17:28] 2025-12-18 08:16:33,338 | INFO     | nevents: 400
[2025-12-18 03:17:28] 2025-12-18 08:16:33,339 | INFO     | neventsw: 0
[2025-12-18 03:17:28] 2025-12-18 08:16:33,339 | INFO     | pid: 20842
[2025-12-18 03:17:28] 2025-12-18 08:16:33,339 | INFO     | pgrp: 20842
[2025-12-18 03:17:28] 2025-12-18 08:16:33,339 | INFO     | corecount: 8
[2025-12-18 03:17:28] 2025-12-18 08:16:33,339 | INFO     | event service: False
[2025-12-18 03:17:28] 2025-12-18 08:16:33,339 | INFO     | sizes: {0: 2283796, 1: 2283995, 4: 2284257, 12: 2284285, 12128: 2313886, 12131: 2323068, 12135: 2323206}
[2025-12-18 03:17:28] 2025-12-18 08:16:33,339 | INFO     | --------------------------------------------------
[2025-12-18 03:17:28] 2025-12-18 08:16:33,339 | INFO     | 
[2025-12-18 03:17:28] 2025-12-18 08:16:33,339 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-18 03:17:28] 2025-12-18 08:16:33,353 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,353 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,353 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,353 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,355 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,355 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,355 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,355 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 03:17:28] 2025-12-18 08:16:33,355 | INFO     | job 6932560913 has completed (purged errors)
[2025-12-18 03:17:28] 2025-12-18 08:16:33,356 | INFO     | overall cleanup function is called
[2025-12-18 03:17:28] 2025-12-18 08:16:34,362 | INFO     | --- collectZombieJob: --- 10, [20842]
[2025-12-18 03:17:28] 2025-12-18 08:16:34,363 | INFO     | zombie collector waiting for pid 20842
[2025-12-18 03:17:28] 2025-12-18 08:16:34,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 03:17:28] 2025-12-18 08:16:34,363 | INFO     | collected zombie processes
[2025-12-18 03:17:28] 2025-12-18 08:16:34,363 | INFO     | will attempt to kill all subprocesses of pid=20842
[2025-12-18 03:17:28] 2025-12-18 08:16:34,525 | INFO     | process IDs to be killed: [20842] (in reverse order)
[2025-12-18 03:17:28] 2025-12-18 08:16:34,580 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 03:17:28] 2025-12-18 08:16:34,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 03:17:28] 2025-12-18 08:16:34,586 | INFO     | did not find any defunct processes belonging to 20842
[2025-12-18 03:17:28] 2025-12-18 08:16:34,590 | INFO     | did not find any defunct processes belonging to 20842
[2025-12-18 03:17:28] 2025-12-18 08:16:34,591 | INFO     | ready for new job
[2025-12-18 03:17:28] 2025-12-18 08:16:34,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 03:17:28] 2025-12-18 08:16:34,594 | INFO     | ***************************************
[2025-12-18 03:17:28] 2025-12-18 08:16:34,594 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 03:17:28] 2025-12-18 08:16:34,594 | INFO     | ***************************************
[2025-12-18 03:17:28] 2025-12-18 08:16:34,594 | INFO     | 
[2025-12-18 03:17:28] 2025-12-18 08:16:34,596 | INFO     | architecture information:
[2025-12-18 03:17:28] 2025-12-18 08:16:34,596 | INFO     | executing command: cat /etc/os-release
[2025-12-18 03:17:28] 2025-12-18 08:16:34,611 | INFO     | cat /etc/os-release:
[2025-12-18 03:17:28] NAME="CentOS Linux"
[2025-12-18 03:17:28] VERSION="7 (Core)"
[2025-12-18 03:17:28] ID="centos"
[2025-12-18 03:17:28] ID_LIKE="rhel fedora"
[2025-12-18 03:17:28] VERSION_ID="7"
[2025-12-18 03:17:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 03:17:28] ANSI_COLOR="0;31"
[2025-12-18 03:17:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 03:17:28] HOME_URL="https://www.centos.org/"
[2025-12-18 03:17:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 03:17:28] 
[2025-12-18 03:17:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 03:17:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 03:17:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 03:17:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 03:17:28] 
[2025-12-18 03:17:28] 2025-12-18 08:16:34,612 | INFO     | ***************************************
[2025-12-18 03:17:28] 2025-12-18 08:16:35,115 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-18 03:17:28] 2025-12-18 08:16:35,130 | INFO     | sufficient remaining disk space (28297920512 B)
[2025-12-18 03:17:28] 2025-12-18 08:16:35,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 03:17:28] 2025-12-18 08:16:35,131 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 03:17:28] 2025-12-18 08:16:35,131 | INFO     | update_server=False
[2025-12-18 03:17:28] 2025-12-18 08:16:35,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 03:17:28] 2025-12-18 08:16:35,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 03:17:28] 2025-12-18 08:16:35,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 03:17:28] 2025-12-18 08:16:35,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 03:17:28] 2025-12-18 08:16:35,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 03:17:28] 2025-12-18 08:16:35,132 | INFO     | aborting loop
[2025-12-18 03:17:28] 2025-12-18 08:16:35,805 | INFO     | all job control threads have been joined
[2025-12-18 03:17:28] 2025-12-18 08:16:35,920 | INFO     | all payload control threads have been joined
[2025-12-18 03:17:28] 2025-12-18 08:16:36,133 | INFO     | [job] queue monitor thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:36,137 | INFO     | [job] retrieve thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:36,138 | INFO     | [job] job monitor thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:36,172 | INFO     | [payload] failed_post thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:36,212 | INFO     | all data control threads have been joined
[2025-12-18 03:17:28] 2025-12-18 08:16:36,422 | INFO     | [payload] validate_post thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:36,738 | INFO     | [data] copytool_in thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:36,777 | INFO     | [job] validate thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:36,811 | INFO     | [job] control thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:36,926 | INFO     | [payload] control thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:37,136 | INFO     | [data] copytool_out thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:37,217 | INFO     | [data] control thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:37,220 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:37,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:37,442 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:37,454 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:16:39,138 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 03:17:28] 2025-12-18 08:17:05,568 | INFO     | PID=14347 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-18 03:17:28] 2025-12-18 08:17:05,569 | INFO     | .. there are 3 such processes running
[2025-12-18 03:17:28] 2025-12-18 08:17:05,569 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 03:17:28] 2025-12-18 08:17:05,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 03:17:28] 2025-12-18 08:17:05,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 03:17:28] 2025-12-18 08:17:21,624 | INFO     | [monitor] cgroup control has ended
[2025-12-18 03:17:28] 2025-12-18 08:17:22,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705351518016)>', '<ExcThread(monitor, started 139705043625728)>']
[2025-12-18 03:17:28] 2025-12-18 08:17:23,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 03:17:28] 2025-12-18 08:17:23,665 | INFO     | [monitor] control thread has ended
[2025-12-18 03:17:28] 2025-12-18 08:17:27,850 | INFO     | all workflow threads have been joined
[2025-12-18 03:17:28] 2025-12-18 08:17:27,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 03:17:28] 2025-12-18 08:17:27,860 | INFO     | traces error code: 0
[2025-12-18 03:17:28] 2025-12-18 08:17:27,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 03:17:28] 2025-12-18 08:17:27,983 [wrapper] ==== pilot stdout END ====
[2025-12-18 03:17:28] 2025-12-18 08:17:27,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 03:17:28] 2025-12-18 08:17:27,989 [wrapper] pilotpid: 14347
[2025-12-18 03:17:28] 2025-12-18 08:17:28,004 [wrapper] Pilot exit status: 0
[2025-12-18 03:17:28] 2025-12-18 08:17:28,013 [wrapper] pandaids: 6932560913
[2025-12-18 03:17:28] 2025-12-18 08:17:28,054 [wrapper] cleanup supervisor_pilot 25739 14348
[2025-12-18 03:17:28] 2025-12-18 08:17:28,057 [wrapper] Test setup, not cleaning
[2025-12-18 03:17:28] 2025-12-18 08:17:28,060 [wrapper] apfmon messages muted
[2025-12-18 03:17:28] 2025-12-18 08:17:28,062 [wrapper] ==== wrapper stdout END ====
[2025-12-18 03:17:28] 2025-12-18 08:17:28,064 [wrapper] ==== wrapper stderr END ====
[2025-12-18 03:17:28]  *** Error codes and diagnostics ***
[2025-12-18 03:17:28]     "exeErrorCode": 0,
[2025-12-18 03:17:28]     "exeErrorDiag": "",
[2025-12-18 03:17:28]     "pilotErrorCode": 0,
[2025-12-18 03:17:28]     "pilotErrorDiag": "",
[2025-12-18 03:17:28]  *** Listing of results directory ***
[2025-12-18 03:17:28] total 337980
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas    579449 Dec 17 12:11 pilot3.tar.gz
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas      5112 Dec 17 12:15 queuedata.json
[2025-12-18 03:17:28] -rwx------ 1 boincer umatlas     36322 Dec 17 12:15 runpilot2-wrapper.sh
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas       100 Dec 17 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 03:17:28] -rwxr-xr-x 1 boincer umatlas      7986 Dec 17 23:53 run_atlas
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas       105 Dec 17 23:53 job.xml
[2025-12-18 03:17:28] -rw-r--r-- 2 boincer umatlas 191494332 Dec 17 23:53 EVNT.47886929._000461.pool.root.1
[2025-12-18 03:17:28] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 23:53 start_atlas.sh
[2025-12-18 03:17:28] drwxrwx--x 2 boincer umatlas      4096 Dec 17 23:53 shared
[2025-12-18 03:17:28] -rw-r--r-- 2 boincer umatlas    592394 Dec 17 23:53 input.tar.gz
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas         0 Dec 17 23:53 boinc_lockfile
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas      2514 Dec 17 23:53 pandaJob.out
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas        57 Dec 17 23:53 setup.sh.local
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas    988110 Dec 17 23:53 agis_schedconf.cvmfs.json
[2025-12-18 03:17:28] drwx------ 5 boincer umatlas      4096 Dec 17 23:54 pilot3
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas      5951 Dec 18 03:13 init_data.xml
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas 146422894 Dec 18 03:15 HITS.47886933._010402.pool.root.1
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas        95 Dec 18 03:16 pilot_heartbeat.json
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas       530 Dec 18 03:16 boinc_task_state.xml
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas      1054 Dec 18 03:16 memory_monitor_summary.json
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas   1516240 Dec 18 03:16 agis_ddmendpoints.agis.ALL.json
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas    423091 Dec 18 03:16 log.47886933._010402.job.log.tgz.1
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas      7852 Dec 18 03:16 heartbeat.json
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas        28 Dec 18 03:17 wrapper_checkpoint.txt
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas      8192 Dec 18 03:17 boinc_mmap_file
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas      4821 Dec 18 03:17 pilotlog.txt
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas   1705689 Dec 18 03:17 log.47886933._010402.job.log.1
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas       357 Dec 18 03:17 output.list
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas       620 Dec 18 03:17 runtime_log
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas   2150400 Dec 18 03:17 result.tar.gz
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas       662 Dec 18 03:17 CrXLDmxIAq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgXcKDmzswM7m.diag
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas      9343 Dec 18 03:17 runtime_log.err
[2025-12-18 03:17:28] -rw-r--r-- 1 boincer umatlas     20877 Dec 18 03:17 stderr.txt
[2025-12-18 03:17:28] HITS file was successfully produced:
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas 146422894 Dec 18 03:15 shared/HITS.pool.root.1
[2025-12-18 03:17:28]  *** Contents of shared directory: ***
[2025-12-18 03:17:28] total 332700
[2025-12-18 03:17:28] -rw-r--r-- 2 boincer umatlas 191494332 Dec 17 23:53 ATLAS.root_0
[2025-12-18 03:17:28] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 23:53 start_atlas.sh
[2025-12-18 03:17:28] -rw-r--r-- 2 boincer umatlas    592394 Dec 17 23:53 input.tar.gz
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas 146422894 Dec 18 03:15 HITS.pool.root.1
[2025-12-18 03:17:28] -rw------- 1 boincer umatlas   2150400 Dec 18 03:17 result.tar.gz
03:17:30 (10646): run_atlas exited; CPU time 90682.046173
03:17:30 (10646): called boinc_finish(0)

</stderr_txt>
]]>

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