Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:54:40 (80890): wrapper (7.7.26015): starting
18:54:40 (80890): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 18:54:40] Arguments: --nthreads 4
[2025-12-18 18:54:40] Threads: 4
[2025-12-18 18:54:40] Checking for CVMFS
[2025-12-18 18:54:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 18:54:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 18:54:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 18:54:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 18:54:40] 2.9.2.0 3051 245 61408 154160 3 57 19777409 36864001 0 130560 0 202803 99.990 12357 33217 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 18:54:40] CVMFS is ok
[2025-12-18 18:54:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 18:54:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 18:54:40] Further information can be found at the LHC@home message board.
[2025-12-18 18:54:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 18:54:40] Checking for apptainer binary...
[2025-12-18 18:54:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 18:54:40] Running /usr/bin/apptainer --version
[2025-12-18 18:54:40] apptainer version 1.4.1-1.1
[2025-12-18 18:54:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 18:54:40] thA334
[2025-12-18 18:54:40] apptainer works
[2025-12-18 18:54:40] Set ATHENA_PROC_NUMBER=4
[2025-12-18 18:54:40] Set ATHENA_CORE_NUMBER=4
[2025-12-18 18:54:41] Starting ATLAS job with PandaID=6932560845
[2025-12-18 18:54:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 20:09:00]  *** The last 200 lines of the pilot log: ***
[2025-12-18 20:09:00] ID="centos"
[2025-12-18 20:09:00] ID_LIKE="rhel fedora"
[2025-12-18 20:09:00] VERSION_ID="7"
[2025-12-18 20:09:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 20:09:00] ANSI_COLOR="0;31"
[2025-12-18 20:09:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 20:09:00] HOME_URL="https://www.centos.org/"
[2025-12-18 20:09:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 20:09:00] 
[2025-12-18 20:09:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 20:09:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 20:09:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 20:09:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 20:09:00] 
[2025-12-18 20:09:00] 2025-12-18 19:07:54,545 | INFO     | ***************************************
[2025-12-18 20:09:00] 2025-12-18 19:07:55,048 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-18 20:09:00] 2025-12-18 19:07:55,065 | INFO     | sufficient remaining disk space (239929917440 B)
[2025-12-18 20:09:00] 2025-12-18 19:07:55,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 20:09:00] 2025-12-18 19:07:55,065 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 20:09:00] 2025-12-18 19:07:55,065 | INFO     | update_server=False
[2025-12-18 20:09:00] 2025-12-18 19:07:55,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 20:09:00] 2025-12-18 19:07:55,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 20:09:00] 2025-12-18 19:07:55,066 | INFO     | aborting loop
[2025-12-18 20:09:00] 2025-12-18 19:07:55,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 20:09:00] 2025-12-18 19:07:55,293 | INFO     | all payload control threads have been joined
[2025-12-18 20:09:00] 2025-12-18 19:07:55,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 20:09:00] 2025-12-18 19:07:55,657 | INFO     | all data control threads have been joined
[2025-12-18 20:09:00] 2025-12-18 19:07:55,921 | INFO     | all job control threads have been joined
[2025-12-18 20:09:00] 2025-12-18 19:07:56,071 | INFO     | [job] retrieve thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:56,071 | INFO     | [job] job monitor thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:56,072 | INFO     | [job] queue monitor thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:56,180 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:56,295 | INFO     | [payload] validate_post thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:56,296 | INFO     | [payload] control thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:56,426 | INFO     | [data] copytool_in thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:56,663 | INFO     | [data] control thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:56,927 | INFO     | [job] control thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:57,008 | INFO     | [payload] failed_post thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:57,078 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:57,303 | INFO     | [data] copytool_out thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:57,494 | INFO     | [job] validate thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:57,527 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:07:58,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 20:09:00] 2025-12-18 19:08:02,052 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:08:05,522 | INFO     | job.realtimelogging is not enabled
[2025-12-18 20:09:00] 2025-12-18 19:08:06,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 20:09:00] 2025-12-18 19:08:24,941 | INFO     | PID=84707 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-18 20:09:00] 2025-12-18 19:08:24,941 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 20:09:00] 2025-12-18 19:08:24,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 20:09:00] 2025-12-18 19:08:24,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 20:09:00] 2025-12-18 19:08:53,640 | INFO     | [monitor] cgroup control has ended
[2025-12-18 20:09:00] 2025-12-18 19:08:55,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643960981312)>', '<ExcThread(monitor, started 140643183613696)>']
[2025-12-18 20:09:00] 2025-12-18 19:08:56,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 20:09:00] 2025-12-18 19:08:56,108 | INFO     | [monitor] control thread has ended
[2025-12-18 20:09:00] 2025-12-18 19:09:00,691 | INFO     | all workflow threads have been joined
[2025-12-18 20:09:00] 2025-12-18 19:09:00,691 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 20:09:00] 2025-12-18 19:09:00,691 | INFO     | traces error code: 0
[2025-12-18 20:09:00] 2025-12-18 19:09:00,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 20:09:00] 2025-12-18 19:09:00,760 [wrapper] ==== pilot stdout END ====
[2025-12-18 20:09:00] 2025-12-18 19:09:00,764 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 20:09:00] 2025-12-18 19:09:00,767 [wrapper] pilotpid: 84707
[2025-12-18 20:09:00] 2025-12-18 19:09:00,771 [wrapper] Pilot exit status: 0
[2025-12-18 20:09:00] 2025-12-18 19:09:00,781 [wrapper] pandaids: 6932560845
[2025-12-18 20:09:00] 2025-12-18 19:09:00,803 [wrapper] cleanup supervisor_pilot  100742 84708
[2025-12-18 20:09:00] 2025-12-18 19:09:00,806 [wrapper] Test setup, not cleaning
[2025-12-18 20:09:00] 2025-12-18 19:09:00,810 [wrapper] apfmon messages muted
[2025-12-18 20:09:00] 2025-12-18 19:09:00,813 [wrapper] ==== wrapper stdout END ====
[2025-12-18 20:09:00] 2025-12-18 19:09:00,816 [wrapper] ==== wrapper stderr END ====
[2025-12-18 20:09:00]  *** Error codes and diagnostics ***
[2025-12-18 20:09:00]     "exeErrorCode": 0,
[2025-12-18 20:09:00]     "exeErrorDiag": "",
[2025-12-18 20:09:00]     "pilotErrorCode": 0,
[2025-12-18 20:09:00]     "pilotErrorDiag": "",
[2025-12-18 20:09:00]  *** Listing of results directory ***
[2025-12-18 20:09:00] total 336428
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc    579449 Dec 17 18:11 pilot3.tar.gz
[2025-12-18 20:09:00] -rwx------ 1 boinc boinc     36322 Dec 17 18:15 runpilot2-wrapper.sh
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc      5112 Dec 17 18:15 queuedata.json
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc       100 Dec 18 18:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 20:09:00] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 18:54 run_atlas
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc       105 Dec 18 18:54 job.xml
[2025-12-18 20:09:00] -rw-r--r-- 2 boinc boinc 191636858 Dec 18 18:54 EVNT.47886929._000458.pool.root.1
[2025-12-18 20:09:00] drwxrwx--x 2 boinc boinc      4096 Dec 18 18:54 shared
[2025-12-18 20:09:00] -rw-r--r-- 2 boinc boinc    592396 Dec 18 18:54 input.tar.gz
[2025-12-18 20:09:00] -rw-r--r-- 2 boinc boinc     15847 Dec 18 18:54 start_atlas.sh
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc         0 Dec 18 18:54 boinc_setup_complete
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc      6369 Dec 18 18:54 init_data.xml
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc         0 Dec 18 18:54 boinc_lockfile
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc      2515 Dec 18 18:54 pandaJob.out
[2025-12-18 20:09:00] -rw------- 1 boinc boinc    988125 Dec 18 18:54 agis_schedconf.cvmfs.json
[2025-12-18 20:09:00] -rw------- 1 boinc boinc   1516240 Dec 18 18:54 agis_ddmendpoints.agis.ALL.json
[2025-12-18 20:09:00] drwx------ 5 boinc boinc      4096 Dec 18 18:54 pilot3
[2025-12-18 20:09:00] -rw------- 1 boinc boinc 147153196 Dec 18 20:07 HITS.47886933._010335.pool.root.1
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc       529 Dec 18 20:07 boinc_task_state.xml
[2025-12-18 20:09:00] -rw------- 1 boinc boinc      1022 Dec 18 20:07 memory_monitor_summary.json
[2025-12-18 20:09:00] -rw------- 1 boinc boinc    257431 Dec 18 20:07 log.47886933._010335.job.log.tgz.1
[2025-12-18 20:09:00] -rw------- 1 boinc boinc      7765 Dec 18 20:07 heartbeat.json
[2025-12-18 20:09:00] -rw------- 1 boinc boinc        95 Dec 18 20:08 pilot_heartbeat.json
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc      8192 Dec 18 20:08 boinc_mmap_file
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc        27 Dec 18 20:08 wrapper_checkpoint.txt
[2025-12-18 20:09:00] -rw------- 1 boinc boinc      4822 Dec 18 20:09 pilotlog.txt
[2025-12-18 20:09:00] -rw------- 1 boinc boinc    648682 Dec 18 20:09 log.47886933._010335.job.log.1
[2025-12-18 20:09:00] -rw------- 1 boinc boinc       357 Dec 18 20:09 output.list
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc       620 Dec 18 20:09 runtime_log
[2025-12-18 20:09:00] -rw------- 1 boinc boinc    921600 Dec 18 20:09 result.tar.gz
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc      8897 Dec 18 20:09 runtime_log.err
[2025-12-18 20:09:00] -rw------- 1 boinc boinc       658 Dec 18 20:09 r1QNDmoIAq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeWcKDmPmYyVo.diag
[2025-12-18 20:09:00] -rw-r--r-- 1 boinc boinc      8705 Dec 18 20:09 stderr.txt
[2025-12-18 20:09:00] HITS file was successfully produced:
[2025-12-18 20:09:00] -rw------- 1 boinc boinc 147153196 Dec 18 20:07 shared/HITS.pool.root.1
[2025-12-18 20:09:00]  *** Contents of shared directory: ***
[2025-12-18 20:09:00] total 332360
[2025-12-18 20:09:00] -rw-r--r-- 2 boinc boinc 191636858 Dec 18 18:54 ATLAS.root_0
[2025-12-18 20:09:00] -rw-r--r-- 2 boinc boinc    592396 Dec 18 18:54 input.tar.gz
[2025-12-18 20:09:00] -rw-r--r-- 2 boinc boinc     15847 Dec 18 18:54 start_atlas.sh
[2025-12-18 20:09:00] -rw------- 1 boinc boinc 147153196 Dec 18 20:07 HITS.pool.root.1
[2025-12-18 20:09:00] -rw------- 1 boinc boinc    921600 Dec 18 20:09 result.tar.gz
20:09:01 (80890): run_atlas exited; CPU time 16558.637463
20:09:01 (80890): called boinc_finish(0)

</stderr_txt>
]]>

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