Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:29:33 (13607): wrapper (7.7.26015): starting
23:29:33 (13607): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 23:29:33] Arguments: --nthreads 8
[2025-12-17 23:29:33] Threads: 8
[2025-12-17 23:29:33] Checking for CVMFS
[2025-12-17 23:29:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 23:29:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 23:29:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 23:29:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 23:29:34] 2.11.2.0 18601 133067 139360 154134 1 56 10456577 18432000 1833 130560 0 94191647 99.985 4949361 31737 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 23:29:34] CVMFS is ok
[2025-12-17 23:29:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 23:29:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 23:29:34] Further information can be found at the LHC@home message board.
[2025-12-17 23:29:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 23:29:34] Checking for apptainer binary...
[2025-12-17 23:29:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 23:29:34] Running /usr/bin/apptainer --version
[2025-12-17 23:29:34] apptainer version 1.3.2-1.el7
[2025-12-17 23:29:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 23:29:34] c-206-13.aglt2.org
[2025-12-17 23:29:34] apptainer works
[2025-12-17 23:29:34] Set ATHENA_PROC_NUMBER=8
[2025-12-17 23:29:34] Set ATHENA_CORE_NUMBER=8
[2025-12-17 23:29:34] Starting ATLAS job with PandaID=6932560744
[2025-12-17 23:29:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 02:49:10]  *** The last 200 lines of the pilot log: ***
[2025-12-18 02:49:10] 2025-12-18 07:48:29,689 | INFO     | total number of processed events: 400 (read)
[2025-12-18 02:49:10] 2025-12-18 07:48:29,690 | INFO     | executing command: lscpu
[2025-12-18 02:49:10] 2025-12-18 07:48:29,716 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 02:49:10] 2025-12-18 07:48:30,498 | INFO     | monitor loop #867: job 0:6932560744 is in state 'finished'
[2025-12-18 02:49:10] 2025-12-18 07:48:30,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 02:49:10] 2025-12-18 07:48:31,426 | INFO     | time since job start (11926s) is within the limit (174528.0s)
[2025-12-18 02:49:10] 2025-12-18 07:48:33,001 | INFO     | monitor loop #868: job 0:6932560744 is in state 'finished'
[2025-12-18 02:49:10] 2025-12-18 07:48:33,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 02:49:10] 2025-12-18 07:48:33,431 | INFO     | time since job start (11928s) is within the limit (174528.0s)
[2025-12-18 02:49:10] 2025-12-18 07:48:33,962 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-18 02:49:10] 2025-12-18 07:48:33,968 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2527.875
[2025-12-18 02:49:10] 2025-12-18 07:48:33,972 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6932560744/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 02:49:10] 2025-12-18 07:48:33,973 | INFO     | extracted standard info from prmon json
[2025-12-18 02:49:10] 2025-12-18 07:48:33,973 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 02:49:10] 2025-12-18 07:48:33,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 02:49:10] 2025-12-18 07:48:33,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 02:49:10] 2025-12-18 07:48:33,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 02:49:10] 2025-12-18 07:48:33,980 | INFO     | fitting pss+swap vs Time
[2025-12-18 02:49:10] 2025-12-18 07:48:33,980 | INFO     | sum of square deviations: 2299168690.0
[2025-12-18 02:49:10] 2025-12-18 07:48:33,982 | INFO     | sum of deviations: 687445843.9999988
[2025-12-18 02:49:10] 2025-12-18 07:48:33,982 | INFO     | mean x: 1766038127.0
[2025-12-18 02:49:10] 2025-12-18 07:48:33,982 | INFO     | mean y: 2491695.4307692307
[2025-12-18 02:49:10] 2025-12-18 07:48:33,983 | INFO     | intersect: -525549407.4391955
[2025-12-18 02:49:10] 2025-12-18 07:48:33,983 | INFO     | chi2: 1.5098513812236614
[2025-12-18 02:49:10] 2025-12-18 07:48:33,984 | INFO     | sum of square deviations: 2126802667.5
[2025-12-18 02:49:10] 2025-12-18 07:48:33,985 | INFO     | sum of deviations: 765906179.0000024
[2025-12-18 02:49:10] 2025-12-18 07:48:33,985 | INFO     | mean x: 1766037974.5
[2025-12-18 02:49:10] 2025-12-18 07:48:33,986 | INFO     | mean y: 2491764.863157895
[2025-12-18 02:49:10] 2025-12-18 07:48:33,986 | INFO     | intersect: -633495493.2345418
[2025-12-18 02:49:10] 2025-12-18 07:48:33,986 | INFO     | chi2: 1.5101087004513083
[2025-12-18 02:49:10] 2025-12-18 07:48:33,986 | INFO     | current chi2=1.5101087004513083 (change=-0.017042685846231448 %)
[2025-12-18 02:49:10] 2025-12-18 07:48:33,986 | INFO     | right removable region: 189
[2025-12-18 02:49:10] 2025-12-18 07:48:33,987 | INFO     | sum of square deviations: 2126802667.5
[2025-12-18 02:49:10] 2025-12-18 07:48:33,988 | INFO     | sum of deviations: -27256584433.0
[2025-12-18 02:49:10] 2025-12-18 07:48:33,989 | INFO     | mean x: 1766038279.5
[2025-12-18 02:49:10] 2025-12-18 07:48:33,989 | INFO     | mean y: 2516116.136842105
[2025-12-18 02:49:10] 2025-12-18 07:48:33,989 | INFO     | intersect: 22635632113.534283
[2025-12-18 02:49:10] 2025-12-18 07:48:33,990 | INFO     | chi2: 0.1261260962820633
[2025-12-18 02:49:10] 2025-12-18 07:48:33,990 | INFO     | current chi2=0.1261260962820633 (change=91.64645621081962 %)
[2025-12-18 02:49:10] 2025-12-18 07:48:33,990 | INFO     | sum of square deviations: 1963274020.0
[2025-12-18 02:49:10] 2025-12-18 07:48:33,992 | INFO     | sum of deviations: -25440507927.0
[2025-12-18 02:49:10] 2025-12-18 07:48:33,992 | INFO     | mean x: 1766038432.0
[2025-12-18 02:49:10] 2025-12-18 07:48:33,992 | INFO     | mean y: 2514371.1513513513
[2025-12-18 02:49:10] 2025-12-18 07:48:33,992 | INFO     | intersect: 22887203044.759254
[2025-12-18 02:49:10] 2025-12-18 07:48:33,993 | INFO     | chi2: 0.11094134721894378
[2025-12-18 02:49:10] 2025-12-18 07:48:33,993 | INFO     | current chi2=0.11094134721894378 (change=12.039339605945605 %)
[2025-12-18 02:49:10] 2025-12-18 07:48:33,993 | INFO     | left removable region: 20
[2025-12-18 02:49:10] 2025-12-18 07:48:33,993 | INFO     | sum of square deviations: 1496660620.0
[2025-12-18 02:49:10] 2025-12-18 07:48:33,995 | INFO     | sum of deviations: -12268209163.0
[2025-12-18 02:49:10] 2025-12-18 07:48:33,995 | INFO     | mean x: 1766038554.0
[2025-12-18 02:49:10] 2025-12-18 07:48:33,995 | INFO     | mean y: 2501857.520710059
[2025-12-18 02:49:10] 2025-12-18 07:48:33,995 | INFO     | intersect: 14478816715.323324
[2025-12-18 02:49:10] 2025-12-18 07:48:33,996 | INFO     | chi2: 0.06401236945798922
[2025-12-18 02:49:10] 2025-12-18 07:48:33,996 | INFO     | current memory leak: -8.20 B/s (using 169 data points, chi2=0.06)
[2025-12-18 02:49:10] 2025-12-18 07:48:33,997 | INFO     | could have reported an average CPU frequency of 2545 MHz (10 samples)
[2025-12-18 02:49:10] 2025-12-18 07:48:33,997 | INFO     | ..............................
[2025-12-18 02:49:10] 2025-12-18 07:48:33,997 | INFO     | . Timing measurements:
[2025-12-18 02:49:10] 2025-12-18 07:48:33,997 | INFO     | . get job = 0 s
[2025-12-18 02:49:10] 2025-12-18 07:48:33,997 | INFO     | . initial setup = 2 s
[2025-12-18 02:49:10] 2025-12-18 07:48:33,997 | INFO     | . payload setup = 4 s
[2025-12-18 02:49:10] 2025-12-18 07:48:33,998 | INFO     | . stage-in = 0 s
[2025-12-18 02:49:10] 2025-12-18 07:48:33,998 | INFO     | . payload execution = 11895 s
[2025-12-18 02:49:10] 2025-12-18 07:48:33,998 | INFO     | . stage-out = 2 s
[2025-12-18 02:49:10] 2025-12-18 07:48:33,998 | INFO     | . log creation = 0 s
[2025-12-18 02:49:10] 2025-12-18 07:48:33,998 | INFO     | ..............................
[2025-12-18 02:49:10] 2025-12-18 07:48:34,107 | INFO     | 
[2025-12-18 02:49:10] 2025-12-18 07:48:34,108 | INFO     | job summary report
[2025-12-18 02:49:10] 2025-12-18 07:48:34,108 | INFO     | --------------------------------------------------
[2025-12-18 02:49:10] 2025-12-18 07:48:34,108 | INFO     | PanDA job id: 6932560744
[2025-12-18 02:49:10] 2025-12-18 07:48:34,108 | INFO     | task id: 47886933
[2025-12-18 02:49:10] 2025-12-18 07:48:34,108 | INFO     | errors: (none)
[2025-12-18 02:49:10] 2025-12-18 07:48:34,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 02:49:10] 2025-12-18 07:48:34,109 | INFO     | pilot state: finished 
[2025-12-18 02:49:10] 2025-12-18 07:48:34,109 | INFO     | transexitcode: 0
[2025-12-18 02:49:10] 2025-12-18 07:48:34,109 | INFO     | exeerrorcode: 0
[2025-12-18 02:49:10] 2025-12-18 07:48:34,109 | INFO     | exeerrordiag: 
[2025-12-18 02:49:10] 2025-12-18 07:48:34,109 | INFO     | exitcode: 0
[2025-12-18 02:49:10] 2025-12-18 07:48:34,109 | INFO     | exitmsg: OK
[2025-12-18 02:49:10] 2025-12-18 07:48:34,110 | INFO     | cpuconsumptiontime: 88969 s
[2025-12-18 02:49:10] 2025-12-18 07:48:34,110 | INFO     | nevents: 400
[2025-12-18 02:49:10] 2025-12-18 07:48:34,110 | INFO     | neventsw: 0
[2025-12-18 02:49:10] 2025-12-18 07:48:34,110 | INFO     | pid: 23982
[2025-12-18 02:49:10] 2025-12-18 07:48:34,110 | INFO     | pgrp: 23982
[2025-12-18 02:49:10] 2025-12-18 07:48:34,110 | INFO     | corecount: 8
[2025-12-18 02:49:10] 2025-12-18 07:48:34,111 | INFO     | event service: False
[2025-12-18 02:49:10] 2025-12-18 07:48:34,111 | INFO     | sizes: {0: 2283965, 1: 2283993, 4: 2284255, 12: 2284283, 11904: 2313683, 11907: 2322681, 11908: 2322865, 11913: 2323059}
[2025-12-18 02:49:10] 2025-12-18 07:48:34,111 | INFO     | --------------------------------------------------
[2025-12-18 02:49:10] 2025-12-18 07:48:34,111 | INFO     | 
[2025-12-18 02:49:10] 2025-12-18 07:48:34,111 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-18 02:49:10] 2025-12-18 07:48:34,126 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,127 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,127 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,127 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 02:49:10] 2025-12-18 07:48:34,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 02:49:10] 2025-12-18 07:48:34,130 | INFO     | job 6932560744 has completed (purged errors)
[2025-12-18 02:49:10] 2025-12-18 07:48:34,130 | INFO     | overall cleanup function is called
[2025-12-18 02:49:10] 2025-12-18 07:48:35,139 | INFO     | --- collectZombieJob: --- 10, [23982]
[2025-12-18 02:49:10] 2025-12-18 07:48:35,140 | INFO     | zombie collector waiting for pid 23982
[2025-12-18 02:49:10] 2025-12-18 07:48:35,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 02:49:10] 2025-12-18 07:48:35,140 | INFO     | collected zombie processes
[2025-12-18 02:49:10] 2025-12-18 07:48:35,141 | INFO     | will attempt to kill all subprocesses of pid=23982
[2025-12-18 02:49:10] 2025-12-18 07:48:35,298 | INFO     | process IDs to be killed: [23982] (in reverse order)
[2025-12-18 02:49:10] 2025-12-18 07:48:35,353 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 02:49:10] 2025-12-18 07:48:35,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 02:49:10] 2025-12-18 07:48:35,359 | INFO     | did not find any defunct processes belonging to 23982
[2025-12-18 02:49:10] 2025-12-18 07:48:35,364 | INFO     | did not find any defunct processes belonging to 23982
[2025-12-18 02:49:10] 2025-12-18 07:48:35,364 | INFO     | ready for new job
[2025-12-18 02:49:10] 2025-12-18 07:48:35,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 02:49:10] 2025-12-18 07:48:35,366 | INFO     | ***************************************
[2025-12-18 02:49:10] 2025-12-18 07:48:35,367 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 02:49:10] 2025-12-18 07:48:35,367 | INFO     | ***************************************
[2025-12-18 02:49:10] 2025-12-18 07:48:35,367 | INFO     | 
[2025-12-18 02:49:10] 2025-12-18 07:48:35,368 | INFO     | architecture information:
[2025-12-18 02:49:10] 2025-12-18 07:48:35,369 | INFO     | executing command: cat /etc/os-release
[2025-12-18 02:49:10] 2025-12-18 07:48:35,382 | INFO     | cat /etc/os-release:
[2025-12-18 02:49:10] NAME="CentOS Linux"
[2025-12-18 02:49:10] VERSION="7 (Core)"
[2025-12-18 02:49:10] ID="centos"
[2025-12-18 02:49:10] ID_LIKE="rhel fedora"
[2025-12-18 02:49:10] VERSION_ID="7"
[2025-12-18 02:49:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 02:49:10] ANSI_COLOR="0;31"
[2025-12-18 02:49:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 02:49:10] HOME_URL="https://www.centos.org/"
[2025-12-18 02:49:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 02:49:10] 
[2025-12-18 02:49:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 02:49:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 02:49:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 02:49:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 02:49:10] 
[2025-12-18 02:49:10] 2025-12-18 07:48:35,382 | INFO     | ***************************************
[2025-12-18 02:49:10] 2025-12-18 07:48:35,886 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-18 02:49:10] 2025-12-18 07:48:35,910 | INFO     | sufficient remaining disk space (28336717824 B)
[2025-12-18 02:49:10] 2025-12-18 07:48:35,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 02:49:10] 2025-12-18 07:48:35,911 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 02:49:10] 2025-12-18 07:48:35,911 | INFO     | update_server=False
[2025-12-18 02:49:10] 2025-12-18 07:48:35,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 02:49:10] 2025-12-18 07:48:35,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 02:49:10] 2025-12-18 07:48:36,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 02:49:10] 2025-12-18 07:48:36,164 | INFO     | all payload control threads have been joined
[2025-12-18 02:49:10] 2025-12-18 07:48:36,263 | INFO     | all data control threads have been joined
[2025-12-18 02:49:10] 2025-12-18 07:48:36,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 02:49:10] 2025-12-18 07:48:36,515 | INFO     | aborting loop
[2025-12-18 02:49:10] 2025-12-18 07:48:36,917 | INFO     | [job] retrieve thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:36,917 | INFO     | [job] queue monitor thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:37,169 | INFO     | [payload] control thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:37,269 | INFO     | [data] control thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:37,330 | INFO     | [payload] validate_post thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:37,368 | INFO     | all job control threads have been joined
[2025-12-18 02:49:10] 2025-12-18 07:48:37,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:37,466 | INFO     | [job] validate thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:37,520 | INFO     | [job] job monitor thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:37,523 | INFO     | [payload] failed_post thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:37,813 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:37,961 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:38,019 | INFO     | [data] copytool_out thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:38,144 | INFO     | [data] copytool_in thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:38,158 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:38,374 | INFO     | [job] control thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:48:39,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 02:49:10] 2025-12-18 07:48:43,267 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 02:49:10] 2025-12-18 07:49:04,154 | INFO     | [monitor] cgroup control has ended
[2025-12-18 02:49:10] 2025-12-18 07:49:05,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647641282368)>', '<ExcThread(monitor, started 140647201752832)>']
[2025-12-18 02:49:10] 2025-12-18 07:49:06,621 | INFO     | PID=17279 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-18 02:49:10] 2025-12-18 07:49:06,621 | INFO     | .. there are 3 such processes running
[2025-12-18 02:49:10] 2025-12-18 07:49:06,622 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 02:49:10] 2025-12-18 07:49:06,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 02:49:10] 2025-12-18 07:49:06,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 02:49:10] 2025-12-18 07:49:06,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 02:49:10] 2025-12-18 07:49:06,622 | INFO     | [monitor] control thread has ended
[2025-12-18 02:49:10] 2025-12-18 07:49:10,035 | INFO     | all workflow threads have been joined
[2025-12-18 02:49:10] 2025-12-18 07:49:10,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 02:49:10] 2025-12-18 07:49:10,036 | INFO     | traces error code: 0
[2025-12-18 02:49:10] 2025-12-18 07:49:10,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 02:49:10] 2025-12-18 07:49:10,162 [wrapper] ==== pilot stdout END ====
[2025-12-18 02:49:10] 2025-12-18 07:49:10,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 02:49:10] 2025-12-18 07:49:10,167 [wrapper] pilotpid: 17279
[2025-12-18 02:49:10] 2025-12-18 07:49:10,169 [wrapper] Pilot exit status: 0
[2025-12-18 02:49:10] 2025-12-18 07:49:10,179 [wrapper] pandaids: 6932560744
[2025-12-18 02:49:10] 2025-12-18 07:49:10,217 [wrapper] cleanup supervisor_pilot 28807 17280
[2025-12-18 02:49:10] 2025-12-18 07:49:10,219 [wrapper] Test setup, not cleaning
[2025-12-18 02:49:10] 2025-12-18 07:49:10,222 [wrapper] apfmon messages muted
[2025-12-18 02:49:10] 2025-12-18 07:49:10,224 [wrapper] ==== wrapper stdout END ====
[2025-12-18 02:49:10] 2025-12-18 07:49:10,226 [wrapper] ==== wrapper stderr END ====
[2025-12-18 02:49:10]  *** Error codes and diagnostics ***
[2025-12-18 02:49:10]     "exeErrorCode": 0,
[2025-12-18 02:49:10]     "exeErrorDiag": "",
[2025-12-18 02:49:10]     "pilotErrorCode": 0,
[2025-12-18 02:49:10]     "pilotErrorDiag": "",
[2025-12-18 02:49:10]  *** Listing of results directory ***
[2025-12-18 02:49:10] total 345520
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas    579449 Dec 17 12:11 pilot3.tar.gz
[2025-12-18 02:49:10] -rwx------ 1 boincer umatlas     36322 Dec 17 12:15 runpilot2-wrapper.sh
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas      5112 Dec 17 12:15 queuedata.json
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas       100 Dec 17 23:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 02:49:10] -rwxr-xr-x 1 boincer umatlas      7986 Dec 17 23:29 run_atlas
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas       105 Dec 17 23:29 job.xml
[2025-12-18 02:49:10] -rw-r--r-- 2 boincer umatlas 192374300 Dec 17 23:29 EVNT.47886929._000454.pool.root.1
[2025-12-18 02:49:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 23:29 start_atlas.sh
[2025-12-18 02:49:10] drwxrwx--x 2 boincer umatlas      4096 Dec 17 23:29 shared
[2025-12-18 02:49:10] -rw-r--r-- 2 boincer umatlas    592393 Dec 17 23:29 input.tar.gz
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas         0 Dec 17 23:29 boinc_lockfile
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas      2513 Dec 17 23:29 pandaJob.out
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas        57 Dec 17 23:29 setup.sh.local
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas    988110 Dec 17 23:29 agis_schedconf.cvmfs.json
[2025-12-18 02:49:10] drwx------ 5 boincer umatlas      4096 Dec 17 23:29 pilot3
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas      5951 Dec 18 02:46 init_data.xml
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas 153313858 Dec 18 02:47 HITS.47886933._010234.pool.root.1
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas      1052 Dec 18 02:48 memory_monitor_summary.json
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas   1516240 Dec 18 02:48 agis_ddmendpoints.agis.ALL.json
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas    428290 Dec 18 02:48 log.47886933._010234.job.log.tgz.1
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas       531 Dec 18 02:48 boinc_task_state.xml
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas      7854 Dec 18 02:48 heartbeat.json
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas      8192 Dec 18 02:48 boinc_mmap_file
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas        28 Dec 18 02:48 wrapper_checkpoint.txt
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas        95 Dec 18 02:49 pilot_heartbeat.json
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas      4821 Dec 18 02:49 pilotlog.txt
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas   1673312 Dec 18 02:49 log.47886933._010234.job.log.1
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas       357 Dec 18 02:49 output.list
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas       620 Dec 18 02:49 runtime_log
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas   2119680 Dec 18 02:49 result.tar.gz
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas      9343 Dec 18 02:49 runtime_log.err
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas       662 Dec 18 02:49 1NRKDmpIAq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtvXKDmTskYcn.diag
[2025-12-18 02:49:10] -rw-r--r-- 1 boincer umatlas     21342 Dec 18 02:49 stderr.txt
[2025-12-18 02:49:10] HITS file was successfully produced:
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas 153313858 Dec 18 02:47 shared/HITS.pool.root.1
[2025-12-18 02:49:10]  *** Contents of shared directory: ***
[2025-12-18 02:49:10] total 340268
[2025-12-18 02:49:10] -rw-r--r-- 2 boincer umatlas 192374300 Dec 17 23:29 ATLAS.root_0
[2025-12-18 02:49:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 23:29 start_atlas.sh
[2025-12-18 02:49:10] -rw-r--r-- 2 boincer umatlas    592393 Dec 17 23:29 input.tar.gz
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas 153313858 Dec 18 02:47 HITS.pool.root.1
[2025-12-18 02:49:10] -rw------- 1 boincer umatlas   2119680 Dec 18 02:49 result.tar.gz
02:49:11 (13607): run_atlas exited; CPU time 89139.667808
02:49:11 (13607): called boinc_finish(0)

</stderr_txt>
]]>

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