Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:03:26 (1971701): wrapper (7.7.26015): starting
18:03:26 (1971701): wrapper: running run_atlas (--nthreads 3)
[2025-12-18 18:03:26] Arguments: --nthreads 3
[2025-12-18 18:03:26] Threads: 3
[2025-12-18 18:03:26] Checking for CVMFS
[2025-12-18 18:03:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 18:03:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 18:03:26] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 18:03:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 18:03:26] 2.9.2.0 19183 7915 72576 154157 1 57 32424675 36864000 0 130560 0 5145373 99.989 290221 8733 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 18:03:26] CVMFS is ok
[2025-12-18 18:03:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 18:03:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 18:03:26] Further information can be found at the LHC@home message board.
[2025-12-18 18:03:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 18:03:26] Checking for apptainer binary...
[2025-12-18 18:03:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 18:03:26] Running /usr/bin/apptainer --version
[2025-12-18 18:03:26] apptainer version 1.4.1-1.1
[2025-12-18 18:03:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 18:03:26] magicA244b
[2025-12-18 18:03:26] apptainer works
[2025-12-18 18:03:26] Set ATHENA_PROC_NUMBER=3
[2025-12-18 18:03:26] Set ATHENA_CORE_NUMBER=3
[2025-12-18 18:03:26] Starting ATLAS job with PandaID=6932559914
[2025-12-18 18:03:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 19:41:03]  *** The last 200 lines of the pilot log: ***
[2025-12-18 19:41:03] 2025-12-18 18:40:32,984 | INFO     | will abort loop
[2025-12-18 19:41:03] 2025-12-18 18:40:33,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 19:41:03] 2025-12-18 18:40:33,342 | INFO     | all job control threads have been joined
[2025-12-18 19:41:03] 2025-12-18 18:40:33,677 | INFO     | [job] retrieve thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:33,678 | INFO     | [job] queue monitor thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:33,711 | INFO     | [payload] failed_post thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:33,714 | INFO     | [data] control thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:33,972 | INFO     | all payload control threads have been joined
[2025-12-18 19:41:03] 2025-12-18 18:40:33,990 | INFO     | [job] job monitor thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:34,013 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:34,032 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:34,348 | INFO     | [job] control thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:34,351 | INFO     | [data] copytool_in thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:34,429 | INFO     | [job] validate thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:34,822 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:34,851 | INFO     | [payload] validate_post thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:34,978 | INFO     | [payload] control thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:35,188 | INFO     | [data] copytool_out thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:36,679 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:42,511 | INFO     | [monitor] cgroup control has ended
[2025-12-18 19:41:03] 2025-12-18 18:40:43,670 | INFO     | job.realtimelogging is not enabled
[2025-12-18 19:41:03] 2025-12-18 18:40:44,676 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 19:41:03] 2025-12-18 18:40:46,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797744584512)>', '<ExcThread(monitor, started 139797251204864)>']
[2025-12-18 19:41:03] 2025-12-18 18:40:51,269 | INFO     | all workflow threads have been joined
[2025-12-18 19:41:03] 2025-12-18 18:40:51,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 19:41:03] 2025-12-18 18:40:51,270 | INFO     | traces error code: 0
[2025-12-18 19:41:03] 2025-12-18 18:40:51,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 19:41:03] 2025-12-18 18:41:03,036 | INFO     | PID=1975430 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 19:41:03] 2025-12-18 18:41:03,036 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 19:41:03] 2025-12-18 18:41:03,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 19:41:03] 2025-12-18 18:41:03,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 19:41:03] 2025-12-18 18:41:03,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 19:41:03] 2025-12-18 18:41:03,036 | INFO     | [monitor] control thread has ended
[2025-12-18 19:41:03] 2025-12-18 18:41:03,080 [wrapper] ==== pilot stdout END ====
[2025-12-18 19:41:03] 2025-12-18 18:41:03,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 19:41:03] 2025-12-18 18:41:03,085 [wrapper] pilotpid: 1975430
[2025-12-18 19:41:03] 2025-12-18 18:41:03,088 [wrapper] Pilot exit status: 0
[2025-12-18 19:41:03] 2025-12-18 18:41:03,095 [wrapper] pandaids: 6932559914
[2025-12-18 19:41:03] 2025-12-18 18:41:03,110 [wrapper] cleanup supervisor_pilot 1993821 1975431
[2025-12-18 19:41:03] 2025-12-18 18:41:03,113 [wrapper] Test setup, not cleaning
[2025-12-18 19:41:03] 2025-12-18 18:41:03,115 [wrapper] apfmon messages muted
[2025-12-18 19:41:03] 2025-12-18 18:41:03,118 [wrapper] ==== wrapper stdout END ====
[2025-12-18 19:41:03] 2025-12-18 18:41:03,121 [wrapper] ==== wrapper stderr END ====
[2025-12-18 19:41:03]  *** Error codes and diagnostics ***
[2025-12-18 19:41:03]     "exeErrorCode": 0,
[2025-12-18 19:41:03]     "exeErrorDiag": "",
[2025-12-18 19:41:03]     "pilotErrorCode": 0,
[2025-12-18 19:41:03]     "pilotErrorDiag": "",
[2025-12-18 19:41:03]  *** Listing of results directory ***
[2025-12-18 19:41:03] total 338104
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc      5112 Dec 17 18:11 queuedata.json
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc    579449 Dec 17 18:11 pilot3.tar.gz
[2025-12-18 19:41:03] -rwx------ 1 boinc boinc     36322 Dec 17 18:12 runpilot2-wrapper.sh
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc       100 Dec 18 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 19:41:03] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 18:03 run_atlas
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc       105 Dec 18 18:03 job.xml
[2025-12-18 19:41:03] -rw-r--r-- 2 boinc boinc 193305856 Dec 18 18:03 EVNT.47886929._000384.pool.root.1
[2025-12-18 19:41:03] -rw-r--r-- 2 boinc boinc    592397 Dec 18 18:03 input.tar.gz
[2025-12-18 19:41:03] -rw-r--r-- 2 boinc boinc     15847 Dec 18 18:03 start_atlas.sh
[2025-12-18 19:41:03] drwxrwx--x 2 boinc boinc      4096 Dec 18 18:03 shared
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc         0 Dec 18 18:03 boinc_setup_complete
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc      6199 Dec 18 18:03 init_data.xml
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc         0 Dec 18 18:03 boinc_lockfile
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc      2513 Dec 18 18:03 pandaJob.out
[2025-12-18 19:41:03] -rw------- 1 boinc boinc    988125 Dec 18 18:03 agis_schedconf.cvmfs.json
[2025-12-18 19:41:03] -rw------- 1 boinc boinc   1516240 Dec 18 18:03 agis_ddmendpoints.agis.ALL.json
[2025-12-18 19:41:03] drwx------ 5 boinc boinc      4096 Dec 18 18:03 pilot3
[2025-12-18 19:41:03] -rw------- 1 boinc boinc 146788185 Dec 18 19:40 HITS.47886933._009492.pool.root.1
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc       530 Dec 18 19:40 boinc_task_state.xml
[2025-12-18 19:41:03] -rw------- 1 boinc boinc      1012 Dec 18 19:40 memory_monitor_summary.json
[2025-12-18 19:41:03] -rw------- 1 boinc boinc    270207 Dec 18 19:40 log.47886933._009492.job.log.tgz.1
[2025-12-18 19:41:03] -rw------- 1 boinc boinc      7750 Dec 18 19:40 heartbeat.json
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc      8192 Dec 18 19:40 boinc_mmap_file
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc        27 Dec 18 19:40 wrapper_checkpoint.txt
[2025-12-18 19:41:03] -rw------- 1 boinc boinc       747 Dec 18 19:41 pilotlog.txt
[2025-12-18 19:41:03] -rw------- 1 boinc boinc        95 Dec 18 19:41 pilot_heartbeat.json
[2025-12-18 19:41:03] -rw------- 1 boinc boinc    847584 Dec 18 19:41 log.47886933._009492.job.log.1
[2025-12-18 19:41:03] -rw------- 1 boinc boinc       357 Dec 18 19:41 output.list
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc       620 Dec 18 19:41 runtime_log
[2025-12-18 19:41:03] -rw------- 1 boinc boinc   1136640 Dec 18 19:41 result.tar.gz
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc      8917 Dec 18 19:41 runtime_log.err
[2025-12-18 19:41:03] -rw------- 1 boinc boinc       662 Dec 18 19:41 kXBLDmtFAq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaNcKDmiXMyvn.diag
[2025-12-18 19:41:03] -rw-r--r-- 1 boinc boinc      6803 Dec 18 19:41 stderr.txt
[2025-12-18 19:41:03] HITS file was successfully produced:
[2025-12-18 19:41:03] -rw------- 1 boinc boinc 146788185 Dec 18 19:40 shared/HITS.pool.root.1
[2025-12-18 19:41:03]  *** Contents of shared directory: ***
[2025-12-18 19:41:03] total 333840
[2025-12-18 19:41:03] -rw-r--r-- 2 boinc boinc 193305856 Dec 18 18:03 ATLAS.root_0
[2025-12-18 19:41:03] -rw-r--r-- 2 boinc boinc    592397 Dec 18 18:03 input.tar.gz
[2025-12-18 19:41:03] -rw-r--r-- 2 boinc boinc     15847 Dec 18 18:03 start_atlas.sh
[2025-12-18 19:41:03] -rw------- 1 boinc boinc 146788185 Dec 18 19:40 HITS.pool.root.1
[2025-12-18 19:41:03] -rw------- 1 boinc boinc   1136640 Dec 18 19:41 result.tar.gz
19:41:04 (1971701): run_atlas exited; CPU time 16790.679563
19:41:04 (1971701): called boinc_finish(0)

</stderr_txt>
]]>

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