Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:57:28 (3553275): wrapper (7.7.26015): starting
19:57:28 (3553275): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 19:57:28] Arguments: --nthreads 12
[2025-12-17 19:57:28] Threads: 12
[2025-12-17 19:57:28] Checking for CVMFS
[2025-12-17 19:57:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 19:57:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 19:57:29] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 19:57:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 19:57:29] 2.11.5.0 1719783 59270 364516 154132 2 680 27969929 45568000 16509 130560 0 493111968 99.779 307979646 24431 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-17 19:57:29] CVMFS is ok
[2025-12-17 19:57:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 19:57:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 19:57:29] Further information can be found at the LHC@home message board.
[2025-12-17 19:57:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 19:57:29] Checking for apptainer binary...
[2025-12-17 19:57:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 19:57:29] Running /usr/bin/apptainer --version
[2025-12-17 19:57:29] apptainer version 1.4.1-1.el9
[2025-12-17 19:57:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 19:57:30] wns0060.triumf.lcg
[2025-12-17 19:57:30] apptainer works
[2025-12-17 19:57:30] Set ATHENA_PROC_NUMBER=12
[2025-12-17 19:57:30] Set ATHENA_CORE_NUMBER=12
[2025-12-17 19:57:31] Starting ATLAS job with PandaID=6932712384
[2025-12-17 19:57:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 20:02:04]  *** The last 200 lines of the pilot log: ***
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | WARNING  | found no stored workdir sizes
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | INFO     | will not add max space = 0 B to job metrics
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | WARNING  | wrong length of table data, x=[1766030319.0], y=[1562.0] (must be same and length>=4)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | could have reported an average CPU frequency of 2556 MHz (4 samples)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | ..............................
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . Timing measurements:
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . get job = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . initial setup = 4 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . payload setup = 12 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . stage-in = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . payload execution = 25 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . stage-out = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . log creation = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | ..............................
[2025-12-17 20:02:04] 2025-12-18 04:01:08,339 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 20:02:04] 2025-12-18 04:01:08,339 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932712384/pilotlog.txt
[2025-12-17 20:02:04] 2025-12-18 04:01:08,349 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-17 20:02:04] - Log from pilotlog.txt -
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | WARNING  | found no stored workdir sizes
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | INFO     | will not add max space = 0 B to job metrics
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | WARNING  | wrong length of table data, x=[1766030319.0], y=[1562.0] (must be same and length>=4)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | could have reported an average CPU frequency of 2556 MHz (4 samples)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | ..............................
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . Timing measurements:
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . get job = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . initial setup = 4 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . payload setup = 12 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . stage-in = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . payload execution = 25 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . stage-out = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . log creation = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | ..............................
[2025-12-17 20:02:04] 2025-12-18 04:01:08,339 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 20:02:04] 2025-12-18 04:01:08,339 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932712384/pilotlog.txt
[2025-12-17 20:02:04] 2025-12-18 04:01:08,350 | WARNING  | 
[2025-12-17 20:02:04] [begin log extracts]
[2025-12-17 20:02:04] - Log from pilotlog.txt -
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | WARNING  | found no stored workdir sizes
[2025-12-17 20:02:04] 2025-12-18 04:01:08,337 | INFO     | will not add max space = 0 B to job metrics
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | WARNING  | wrong length of table data, x=[1766030319.0], y=[1562.0] (must be same and length>=4)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | could have reported an average CPU frequency of 2556 MHz (4 samples)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | ..............................
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . Timing measurements:
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . get job = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . initial setup = 4 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . payload setup = 12 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . stage-in = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . payload execution = 25 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . stage-out = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | . log creation = 0 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,338 | INFO     | ..............................
[2025-12-17 20:02:04] 2025-12-18 04:01:08,339 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 20:02:04] 2025-12-18 04:01:08,339 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932712384/pilotlog.txt
[2025-12-17 20:02:04] [end log extracts]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,350 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,351 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | 
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | job summary report
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | --------------------------------------------------
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | PanDA job id: 6932712384
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | task id: 47886933
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-17 19:58:50,905 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | pilot state: failed 
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | transexitcode: 65
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | exeerrorcode: 65
[2025-12-17 20:02:04] 2025-12-18 04:01:08,407 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | exitcode: 65
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | cpuconsumptiontime: 16 s
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | nevents: 0
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | neventsw: 0
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | pid: 3563540
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | pgrp: 3563540
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | corecount: 12
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | event service: False
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | sizes: {0: 2283964, 1: 2283964, 9: 2284254, 11: 2284282, 42: 2307475, 44: 2311767, 45: 2311923, 171: 2312089}
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | --------------------------------------------------
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | 
[2025-12-17 20:02:04] 2025-12-18 04:01:08,408 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | job 6932712384 has completed (purged errors)
[2025-12-17 20:02:04] 2025-12-18 04:01:08,423 | INFO     | overall cleanup function is called
[2025-12-17 20:02:04] 2025-12-18 04:01:09,429 | INFO     | --- collectZombieJob: --- 10, [3563540]
[2025-12-17 20:02:04] 2025-12-18 04:01:09,430 | INFO     | zombie collector waiting for pid 3563540
[2025-12-17 20:02:04] 2025-12-18 04:01:09,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 20:02:04] 2025-12-18 04:01:09,430 | INFO     | collected zombie processes
[2025-12-17 20:02:04] 2025-12-18 04:01:09,430 | INFO     | will attempt to kill all subprocesses of pid=3563540
[2025-12-17 20:02:04] 2025-12-18 04:01:09,911 | INFO     | process IDs to be killed: [3563540] (in reverse order)
[2025-12-17 20:02:04] 2025-12-18 04:01:10,049 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 20:02:04] 2025-12-18 04:01:10,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 20:02:04] 2025-12-18 04:01:10,109 | INFO     | did not find any defunct processes belonging to 3563540
[2025-12-17 20:02:04] 2025-12-18 04:01:10,131 | INFO     | did not find any defunct processes belonging to 3563540
[2025-12-17 20:02:04] 2025-12-18 04:01:10,131 | INFO     | ready for new job
[2025-12-17 20:02:04] 2025-12-18 04:01:10,131 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 20:02:04] 2025-12-18 04:01:10,132 | INFO     | ***************************************
[2025-12-17 20:02:04] 2025-12-18 04:01:10,132 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 20:02:04] 2025-12-18 04:01:10,132 | INFO     | ***************************************
[2025-12-17 20:02:04] 2025-12-18 04:01:10,133 | INFO     | 
[2025-12-17 20:02:04] 2025-12-18 04:01:10,189 | INFO     | architecture information:
[2025-12-17 20:02:04] 2025-12-18 04:01:10,197 | INFO     | executing command: cat /etc/os-release
[2025-12-17 20:02:04] 2025-12-18 04:01:10,290 | INFO     | cat /etc/os-release:
[2025-12-17 20:02:04] NAME="CentOS Linux"
[2025-12-17 20:02:04] VERSION="7 (Core)"
[2025-12-17 20:02:04] ID="centos"
[2025-12-17 20:02:04] ID_LIKE="rhel fedora"
[2025-12-17 20:02:04] VERSION_ID="7"
[2025-12-17 20:02:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 20:02:04] ANSI_COLOR="0;31"
[2025-12-17 20:02:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 20:02:04] HOME_URL="https://www.centos.org/"
[2025-12-17 20:02:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 20:02:04] 
[2025-12-17 20:02:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 20:02:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 20:02:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 20:02:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 20:02:04] 
[2025-12-17 20:02:04] 2025-12-18 04:01:10,290 | INFO     | ***************************************
[2025-12-17 20:02:04] 2025-12-18 04:01:10,794 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-17 20:02:04] 2025-12-18 04:01:10,843 | INFO     | sufficient remaining disk space (1942064463872 B)
[2025-12-17 20:02:04] 2025-12-18 04:01:10,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 20:02:04] 2025-12-18 04:01:10,843 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 20:02:04] 2025-12-18 04:01:10,843 | INFO     | update_server=False
[2025-12-17 20:02:04] 2025-12-18 04:01:10,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 20:02:04] 2025-12-18 04:01:10,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 20:02:04] 2025-12-18 04:01:11,497 | INFO     | all payload control threads have been joined
[2025-12-17 20:02:04] 2025-12-18 04:01:11,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 20:02:04] 2025-12-18 04:01:11,628 | INFO     | aborting loop
[2025-12-17 20:02:04] 2025-12-18 04:01:11,683 | INFO     | all job control threads have been joined
[2025-12-17 20:02:04] 2025-12-18 04:01:11,813 | INFO     | all data control threads have been joined
[2025-12-17 20:02:04] 2025-12-18 04:01:11,853 | INFO     | [job] retrieve thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:11,898 | INFO     | [data] copytool_in thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 20:02:04] 2025-12-18 04:01:12,211 | INFO     | [payload] validate_post thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,274 | INFO     | [payload] failed_post thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,472 | INFO     | [job] validate thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,504 | INFO     | [payload] control thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,634 | INFO     | [job] job monitor thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,688 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,689 | INFO     | [job] control thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,774 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,819 | INFO     | [data] control thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,857 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:12,917 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:13,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 20:02:04] 2025-12-18 04:01:14,216 | INFO     | [data] copytool_out thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:14,428 | INFO     | [job] queue monitor thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:14,860 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 20:02:04] 2025-12-18 04:01:41,512 | INFO     | PID=3556950 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 20:02:04] 2025-12-18 04:01:41,512 | INFO     | .. there are 21 such processes running
[2025-12-17 20:02:04] 2025-12-18 04:01:41,512 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 20:02:04] 2025-12-18 04:01:41,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 20:02:04] 2025-12-18 04:01:41,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 20:02:04] 2025-12-18 04:01:56,967 | INFO     | [monitor] cgroup control has ended
[2025-12-17 20:02:04] 2025-12-18 04:01:58,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655177115456)>', '<ExcThread(monitor, started 140654105573120)>']
[2025-12-17 20:02:04] 2025-12-18 04:01:59,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 20:02:04] 2025-12-18 04:01:59,639 | INFO     | [monitor] control thread has ended
[2025-12-17 20:02:04] 2025-12-18 04:02:03,885 | INFO     | all workflow threads have been joined
[2025-12-17 20:02:04] 2025-12-18 04:02:03,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 20:02:04] 2025-12-18 04:02:03,886 | INFO     | traces error code: 0
[2025-12-17 20:02:04] 2025-12-18 04:02:03,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 20:02:04] 2025-12-18 04:02:04,072 [wrapper] ==== pilot stdout END ====
[2025-12-17 20:02:04] 2025-12-18 04:02:04,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 20:02:04] 2025-12-18 04:02:04,088 [wrapper] pilotpid: 3556950
[2025-12-17 20:02:04] 2025-12-18 04:02:04,090 [wrapper] Pilot exit status: 0
[2025-12-17 20:02:04] 2025-12-18 04:02:04,214 [wrapper] pandaids: 6932712384
[2025-12-17 20:02:04] 2025-12-18 04:02:04,350 [wrapper] cleanup supervisor_pilot 3556956 3556951
[2025-12-17 20:02:04] 2025-12-18 04:02:04,353 [wrapper] Test setup, not cleaning
[2025-12-17 20:02:04] 2025-12-18 04:02:04,355 [wrapper] apfmon messages muted
[2025-12-17 20:02:04] 2025-12-18 04:02:04,357 [wrapper] ==== wrapper stdout END ====
[2025-12-17 20:02:04] 2025-12-18 04:02:04,359 [wrapper] ==== wrapper stderr END ====
[2025-12-17 20:02:04]  *** Error codes and diagnostics ***
[2025-12-17 20:02:04]     "exeErrorCode": 65,
[2025-12-17 20:02:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-17 20:02:04]     "pilotErrorCode": 1305,
[2025-12-17 20:02:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-17 20:02:04]  *** Listing of results directory ***
[2025-12-17 20:02:04] total 190876
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc    579449 Dec 17 14:04 pilot3.tar.gz
[2025-12-17 20:02:04] -rwx------. 1 boinc boinc     36322 Dec 17 14:08 runpilot2-wrapper.sh
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc      5112 Dec 17 14:09 queuedata.json
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc       100 Dec 17 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 20:02:04] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 19:57 run_atlas
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc       105 Dec 17 19:57 job.xml
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc      6596 Dec 17 19:57 init_data.xml
[2025-12-17 20:02:04] -rw-r--r--. 2 boinc boinc 191339507 Dec 17 19:57 EVNT.47886929._000491.pool.root.1
[2025-12-17 20:02:04] -rw-r--r--. 2 boinc boinc     15847 Dec 17 19:57 start_atlas.sh
[2025-12-17 20:02:04] drwxrwx--x. 2 boinc boinc      4096 Dec 17 19:57 shared
[2025-12-17 20:02:04] -rw-r--r--. 2 boinc boinc    592404 Dec 17 19:57 input.tar.gz
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc         0 Dec 17 19:57 boinc_lockfile
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc      2514 Dec 17 19:57 pandaJob.out
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc    988118 Dec 17 19:57 agis_schedconf.cvmfs.json
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc   1516240 Dec 17 19:57 agis_ddmendpoints.agis.ALL.json
[2025-12-17 20:02:04] drwx------. 5 boinc boinc      4096 Dec 17 19:57 pilot3
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc       522 Dec 17 19:58 boinc_task_state.xml
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc       945 Dec 17 19:58 memory_monitor_summary.json
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc     21253 Dec 17 19:59 log.47886933._012212.job.log.tgz.1
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc        95 Dec 17 20:00 pilot_heartbeat.json
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc      8378 Dec 17 20:01 heartbeat.json
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc      4823 Dec 17 20:02 pilotlog.txt
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc     85486 Dec 17 20:02 log.47886933._012212.job.log.1
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc        22 Dec 17 20:02 wrapper_checkpoint.txt
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc       188 Dec 17 20:02 output.list
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc       620 Dec 17 20:02 runtime_log
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc    122880 Dec 17 20:02 result.tar.gz
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc      8636 Dec 17 20:02 runtime_log.err
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc       644 Dec 17 20:02 HYMODmOsEq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUJYKDm8iE4Jn.diag
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc      8192 Dec 17 20:02 boinc_mmap_file
[2025-12-17 20:02:04] -rw-r--r--. 1 boinc boinc     21652 Dec 17 20:02 stderr.txt
[2025-12-17 20:02:04] No HITS result produced
[2025-12-17 20:02:04]  *** Contents of shared directory: ***
[2025-12-17 20:02:04] total 187572
[2025-12-17 20:02:04] -rw-r--r--. 2 boinc boinc 191339507 Dec 17 19:57 ATLAS.root_0
[2025-12-17 20:02:04] -rw-r--r--. 2 boinc boinc     15847 Dec 17 19:57 start_atlas.sh
[2025-12-17 20:02:04] -rw-r--r--. 2 boinc boinc    592404 Dec 17 19:57 input.tar.gz
[2025-12-17 20:02:04] -rw-------. 1 boinc boinc    122880 Dec 17 20:02 result.tar.gz
20:02:06 (3553275): run_atlas exited; CPU time 22.959293
20:02:06 (3553275): called boinc_finish(0)

</stderr_txt>
]]>

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