Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:20:41 (2791021): wrapper (7.7.26015): starting
12:20:41 (2791021): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 12:20:41] Arguments: --nthreads 4
[2025-12-18 12:20:41] Threads: 4
[2025-12-18 12:20:41] Checking for CVMFS
[2025-12-18 12:20:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 12:20:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 12:20:41] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 12:20:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 12:20:41] 2.9.2.0 639704 7405 100568 154149 2 57 19883731 36864000 0 130560 0 5414943 99.990 271582 18072 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 12:20:41] CVMFS is ok
[2025-12-18 12:20:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 12:20:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 12:20:41] Further information can be found at the LHC@home message board.
[2025-12-18 12:20:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 12:20:41] Checking for apptainer binary...
[2025-12-18 12:20:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 12:20:41] Running /usr/bin/apptainer --version
[2025-12-18 12:20:41] apptainer version 1.4.1-1.1
[2025-12-18 12:20:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 12:20:41] thA309
[2025-12-18 12:20:41] apptainer works
[2025-12-18 12:20:41] Set ATHENA_PROC_NUMBER=4
[2025-12-18 12:20:41] Set ATHENA_CORE_NUMBER=4
[2025-12-18 12:20:41] Starting ATLAS job with PandaID=6932674775
[2025-12-18 12:20:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 14:00:16]  *** The last 200 lines of the pilot log: ***
[2025-12-18 14:00:16] NAME="CentOS Linux"
[2025-12-18 14:00:16] VERSION="7 (Core)"
[2025-12-18 14:00:16] ID="centos"
[2025-12-18 14:00:16] ID_LIKE="rhel fedora"
[2025-12-18 14:00:16] VERSION_ID="7"
[2025-12-18 14:00:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 14:00:16] ANSI_COLOR="0;31"
[2025-12-18 14:00:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 14:00:16] HOME_URL="https://www.centos.org/"
[2025-12-18 14:00:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 14:00:16] 
[2025-12-18 14:00:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 14:00:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 14:00:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 14:00:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 14:00:16] 
[2025-12-18 14:00:16] 2025-12-18 12:59:45,397 | INFO     | ***************************************
[2025-12-18 14:00:16] 2025-12-18 12:59:45,901 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-18 14:00:16] 2025-12-18 12:59:45,918 | INFO     | sufficient remaining disk space (240068329472 B)
[2025-12-18 14:00:16] 2025-12-18 12:59:45,919 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 14:00:16] 2025-12-18 12:59:45,919 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 14:00:16] 2025-12-18 12:59:45,919 | INFO     | update_server=False
[2025-12-18 14:00:16] 2025-12-18 12:59:45,919 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 14:00:16] 2025-12-18 12:59:45,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 14:00:16] 2025-12-18 12:59:46,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 14:00:16] 2025-12-18 12:59:46,027 | INFO     | aborting loop
[2025-12-18 14:00:16] 2025-12-18 12:59:46,202 | INFO     | all job control threads have been joined
[2025-12-18 14:00:16] 2025-12-18 12:59:46,388 | INFO     | all data control threads have been joined
[2025-12-18 14:00:16] 2025-12-18 12:59:46,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 14:00:16] 2025-12-18 12:59:46,924 | INFO     | [job] retrieve thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:46,925 | INFO     | [job] queue monitor thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:46,980 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:47,015 | INFO     | all payload control threads have been joined
[2025-12-18 14:00:16] 2025-12-18 12:59:47,033 | INFO     | [job] job monitor thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:47,086 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:47,208 | INFO     | [job] control thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:47,382 | INFO     | [payload] failed_post thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:47,391 | INFO     | [data] control thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:47,438 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:47,687 | INFO     | [data] copytool_in thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:48,020 | INFO     | [payload] control thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:48,182 | INFO     | [payload] validate_post thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:48,401 | INFO     | [job] validate thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:48,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 14:00:16] 2025-12-18 12:59:48,890 | INFO     | [data] copytool_out thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:52,779 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:56,499 | INFO     | job.realtimelogging is not enabled
[2025-12-18 14:00:16] 2025-12-18 12:59:56,935 | INFO     | [monitor] cgroup control has ended
[2025-12-18 14:00:16] 2025-12-18 12:59:57,504 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 14:00:16] 2025-12-18 12:59:57,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139634371708736)>', '<ExcThread(monitor, started 139633564292864)>']
[2025-12-18 14:00:16] 2025-12-18 13:00:02,940 | INFO     | all workflow threads have been joined
[2025-12-18 14:00:16] 2025-12-18 13:00:02,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 14:00:16] 2025-12-18 13:00:02,940 | INFO     | traces error code: 0
[2025-12-18 14:00:16] 2025-12-18 13:00:02,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 14:00:16] 2025-12-18 13:00:16,063 | INFO     | PID=2794804 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 14:00:16] 2025-12-18 13:00:16,063 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 14:00:16] 2025-12-18 13:00:16,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 14:00:16] 2025-12-18 13:00:16,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 14:00:16] 2025-12-18 13:00:16,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 14:00:16] 2025-12-18 13:00:16,063 | INFO     | [monitor] control thread has ended
[2025-12-18 14:00:16] 2025-12-18 13:00:16,142 [wrapper] ==== pilot stdout END ====
[2025-12-18 14:00:16] 2025-12-18 13:00:16,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 14:00:16] 2025-12-18 13:00:16,151 [wrapper] pilotpid: 2794804
[2025-12-18 14:00:16] 2025-12-18 13:00:16,155 [wrapper] Pilot exit status: 0
[2025-12-18 14:00:16] 2025-12-18 13:00:16,168 [wrapper] pandaids: 6932674775
[2025-12-18 14:00:16] 2025-12-18 13:00:16,192 [wrapper] cleanup supervisor_pilot 2816967 2794805
[2025-12-18 14:00:16] 2025-12-18 13:00:16,196 [wrapper] Test setup, not cleaning
[2025-12-18 14:00:16] 2025-12-18 13:00:16,200 [wrapper] apfmon messages muted
[2025-12-18 14:00:16] 2025-12-18 13:00:16,204 [wrapper] ==== wrapper stdout END ====
[2025-12-18 14:00:16] 2025-12-18 13:00:16,208 [wrapper] ==== wrapper stderr END ====
[2025-12-18 14:00:16]  *** Error codes and diagnostics ***
[2025-12-18 14:00:16]     "exeErrorCode": 0,
[2025-12-18 14:00:16]     "exeErrorDiag": "",
[2025-12-18 14:00:16]     "pilotErrorCode": 0,
[2025-12-18 14:00:16]     "pilotErrorDiag": "",
[2025-12-18 14:00:16]  *** Listing of results directory ***
[2025-12-18 14:00:16] total 436756
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc    579449 Dec 17 23:04 pilot3.tar.gz
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc      5112 Dec 17 23:05 queuedata.json
[2025-12-18 14:00:16] -rwx------ 1 boinc boinc     36322 Dec 17 23:05 runpilot2-wrapper.sh
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc       100 Dec 18 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 14:00:16] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 12:20 run_atlas
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc       105 Dec 18 12:20 job.xml
[2025-12-18 14:00:16] -rw-r--r-- 2 boinc boinc 221833687 Dec 18 12:20 EVNT.47898761._000823.pool.root.1
[2025-12-18 14:00:16] -rw-r--r-- 2 boinc boinc    592396 Dec 18 12:20 input.tar.gz
[2025-12-18 14:00:16] -rw-r--r-- 2 boinc boinc     15847 Dec 18 12:20 start_atlas.sh
[2025-12-18 14:00:16] drwxrwx--x 2 boinc boinc      4096 Dec 18 12:20 shared
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc         0 Dec 18 12:20 boinc_setup_complete
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc      6377 Dec 18 12:20 init_data.xml
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc         0 Dec 18 12:20 boinc_lockfile
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc      2508 Dec 18 12:20 pandaJob.out
[2025-12-18 14:00:16] -rw------- 1 boinc boinc    988141 Dec 18 12:20 agis_schedconf.cvmfs.json
[2025-12-18 14:00:16] -rw------- 1 boinc boinc   1516240 Dec 18 12:20 agis_ddmendpoints.agis.ALL.json
[2025-12-18 14:00:16] drwx------ 5 boinc boinc      4096 Dec 18 12:20 pilot3
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc       529 Dec 18 13:59 boinc_task_state.xml
[2025-12-18 14:00:16] -rw------- 1 boinc boinc 219191636 Dec 18 13:59 HITS.47898763._021413.pool.root.1
[2025-12-18 14:00:16] -rw------- 1 boinc boinc        95 Dec 18 13:59 pilot_heartbeat.json
[2025-12-18 14:00:16] -rw------- 1 boinc boinc      1022 Dec 18 13:59 memory_monitor_summary.json
[2025-12-18 14:00:16] -rw------- 1 boinc boinc    294719 Dec 18 13:59 log.47898763._021413.job.log.tgz.1
[2025-12-18 14:00:16] -rw------- 1 boinc boinc      7771 Dec 18 13:59 heartbeat.json
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc      8192 Dec 18 14:00 boinc_mmap_file
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc        27 Dec 18 14:00 wrapper_checkpoint.txt
[2025-12-18 14:00:16] -rw------- 1 boinc boinc       747 Dec 18 14:00 pilotlog.txt
[2025-12-18 14:00:16] -rw------- 1 boinc boinc    861608 Dec 18 14:00 log.47898763._021413.job.log.1
[2025-12-18 14:00:16] -rw------- 1 boinc boinc       357 Dec 18 14:00 output.list
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc       620 Dec 18 14:00 runtime_log
[2025-12-18 14:00:16] -rw------- 1 boinc boinc   1177600 Dec 18 14:00 result.tar.gz
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc      8897 Dec 18 14:00 runtime_log.err
[2025-12-18 14:00:16] -rw------- 1 boinc boinc       659 Dec 18 14:00 EmjNDmqpEq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2rcKDmyq33Gm.diag
[2025-12-18 14:00:16] -rw-r--r-- 1 boinc boinc      8802 Dec 18 14:00 stderr.txt
[2025-12-18 14:00:16] HITS file was successfully produced:
[2025-12-18 14:00:16] -rw------- 1 boinc boinc 219191636 Dec 18 13:59 shared/HITS.pool.root.1
[2025-12-18 14:00:16]  *** Contents of shared directory: ***
[2025-12-18 14:00:16] total 432448
[2025-12-18 14:00:16] -rw-r--r-- 2 boinc boinc 221833687 Dec 18 12:20 ATLAS.root_0
[2025-12-18 14:00:16] -rw-r--r-- 2 boinc boinc    592396 Dec 18 12:20 input.tar.gz
[2025-12-18 14:00:16] -rw-r--r-- 2 boinc boinc     15847 Dec 18 12:20 start_atlas.sh
[2025-12-18 14:00:16] -rw------- 1 boinc boinc 219191636 Dec 18 13:59 HITS.pool.root.1
[2025-12-18 14:00:16] -rw------- 1 boinc boinc   1177600 Dec 18 14:00 result.tar.gz
14:00:17 (2791021): run_atlas exited; CPU time 22601.010390
14:00:17 (2791021): called boinc_finish(0)

</stderr_txt>
]]>

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