Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:24 (4073091): wrapper (7.7.26015): starting
00:04:24 (4073091): wrapper: running run_atlas (--nthreads 12)
[2025-12-18 00:04:24] Arguments: --nthreads 12
[2025-12-18 00:04:24] Threads: 12
[2025-12-18 00:04:24] Checking for CVMFS
[2025-12-18 00:04:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 00:04:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 00:04:26] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 00:04:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 00:04:28] 2.13.2.0 9379 65006 324316 154134 0 219 22215688 39288832 12045 16776704 0 64828545 99.538 86990317 37410 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-18 00:04:28] CVMFS is ok
[2025-12-18 00:04:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 00:04:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 00:04:28] Further information can be found at the LHC@home message board.
[2025-12-18 00:04:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 00:04:28] Checking for apptainer binary...
[2025-12-18 00:04:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 00:04:28] Running /usr/bin/apptainer --version
[2025-12-18 00:04:28] apptainer version 1.4.5-2.el9
[2025-12-18 00:04:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 00:04:29] c-210-19.aglt2.org
[2025-12-18 00:04:29] apptainer works
[2025-12-18 00:04:30] Set ATHENA_PROC_NUMBER=12
[2025-12-18 00:04:30] Set ATHENA_CORE_NUMBER=12
[2025-12-18 00:04:30] Starting ATLAS job with PandaID=6932674759
[2025-12-18 00:04:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 12:22:44]  *** The last 200 lines of the pilot log: ***
[2025-12-18 12:22:44] 2025-12-18 17:15:13,826 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8488750000006
[2025-12-18 12:22:44] 2025-12-18 17:15:13,859 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6932674759/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 12:22:44] 2025-12-18 17:15:13,860 | INFO     | extracted standard info from prmon json
[2025-12-18 12:22:44] 2025-12-18 17:15:13,860 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 12:22:44] 2025-12-18 17:15:13,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 12:22:44] 2025-12-18 17:15:13,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 12:22:44] 2025-12-18 17:15:13,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 12:22:44] 2025-12-18 17:15:13,904 | INFO     | fitting pss+swap vs Time
[2025-12-18 12:22:44] 2025-12-18 17:15:13,906 | INFO     | sum of square deviations: 111926562516.51573
[2025-12-18 12:22:44] 2025-12-18 17:15:13,926 | INFO     | time since job start (43721s) is within the limit (174528.0s)
[2025-12-18 12:22:44] 2025-12-18 17:15:13,951 | INFO     | sum of deviations: 1164921273913.9836
[2025-12-18 12:22:44] 2025-12-18 17:15:13,959 | INFO     | mean x: 1766056328.602528
[2025-12-18 12:22:44] 2025-12-18 17:15:13,959 | INFO     | mean y: 2580875.342696629
[2025-12-18 12:22:44] 2025-12-18 17:15:13,959 | INFO     | intersect: -18378369471.595142
[2025-12-18 12:22:44] 2025-12-18 17:15:13,961 | INFO     | chi2: 14.513755642872182
[2025-12-18 12:22:44] 2025-12-18 17:15:13,962 | INFO     | sum of square deviations: 109585834173.04681
[2025-12-18 12:22:44] 2025-12-18 17:15:14,013 | INFO     | sum of deviations: 1403350550585.6816
[2025-12-18 12:22:44] 2025-12-18 17:15:14,014 | INFO     | mean x: 1766056176.1244695
[2025-12-18 12:22:44] 2025-12-18 17:15:14,014 | INFO     | mean y: 2596408.810466761
[2025-12-18 12:22:44] 2025-12-18 17:15:14,014 | INFO     | intersect: -22613428060.336586
[2025-12-18 12:22:44] 2025-12-18 17:15:14,015 | INFO     | chi2: 10.826183360496383
[2025-12-18 12:22:44] 2025-12-18 17:15:14,015 | INFO     | current chi2=10.826183360496383 (change=25.407429841819017 %)
[2025-12-18 12:22:44] 2025-12-18 17:15:14,016 | INFO     | sum of square deviations: 107277731678.09674
[2025-12-18 12:22:44] 2025-12-18 17:15:14,058 | INFO     | sum of deviations: 1390723407927.539
[2025-12-18 12:22:44] 2025-12-18 17:15:14,058 | INFO     | mean x: 1766056023.6381767
[2025-12-18 12:22:44] 2025-12-18 17:15:14,058 | INFO     | mean y: 2595574.576923077
[2025-12-18 12:22:44] 2025-12-18 17:15:14,058 | INFO     | intersect: -22892141416.646324
[2025-12-18 12:22:44] 2025-12-18 17:15:14,068 | INFO     | chi2: 10.819993814358165
[2025-12-18 12:22:44] 2025-12-18 17:15:14,068 | INFO     | current chi2=10.819993814358165 (change=0.057172005425321124 %)
[2025-12-18 12:22:44] 2025-12-18 17:15:14,068 | INFO     | right removable region: 701
[2025-12-18 12:22:44] 2025-12-18 17:15:14,069 | INFO     | sum of square deviations: 109584486683.04674
[2025-12-18 12:22:44] 2025-12-18 17:15:14,114 | INFO     | sum of deviations: 924961431808.4677
[2025-12-18 12:22:44] 2025-12-18 17:15:14,114 | INFO     | mean x: 1766056481.1244695
[2025-12-18 12:22:44] 2025-12-18 17:15:14,114 | INFO     | mean y: 2596494.915134371
[2025-12-18 12:22:44] 2025-12-18 17:15:14,114 | INFO     | intersect: -14904021958.846617
[2025-12-18 12:22:44] 2025-12-18 17:15:14,125 | INFO     | chi2: 10.658700024554538
[2025-12-18 12:22:44] 2025-12-18 17:15:14,125 | INFO     | current chi2=10.658700024554538 (change=26.561392606956918 %)
[2025-12-18 12:22:44] 2025-12-18 17:15:14,126 | INFO     | sum of square deviations: 107275467837.53769
[2025-12-18 12:22:44] 2025-12-18 17:15:14,168 | INFO     | sum of deviations: 724722626616.8463
[2025-12-18 12:22:44] 2025-12-18 17:15:14,169 | INFO     | mean x: 1766056633.6410255
[2025-12-18 12:22:44] 2025-12-18 17:15:14,169 | INFO     | mean y: 2609721.4914529915
[2025-12-18 12:22:44] 2025-12-18 17:15:14,169 | INFO     | intersect: -11928367864.406971
[2025-12-18 12:22:44] 2025-12-18 17:15:14,178 | INFO     | monitor loop #2285: job 0:6932674759 is in state 'finished'
[2025-12-18 12:22:44] 2025-12-18 17:15:14,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 12:22:44] 2025-12-18 17:15:14,179 | INFO     | chi2: 8.132699967503836
[2025-12-18 12:22:44] 2025-12-18 17:15:14,179 | INFO     | current chi2=8.132699967503836 (change=23.698950634050437 %)
[2025-12-18 12:22:44] 2025-12-18 17:15:14,179 | INFO     | left removable region: 20
[2025-12-18 12:22:44] 2025-12-18 17:15:14,180 | INFO     | sum of square deviations: 97933761255.83531
[2025-12-18 12:22:44] 2025-12-18 17:15:14,220 | INFO     | sum of deviations: 659998371594.4501
[2025-12-18 12:22:44] 2025-12-18 17:15:14,220 | INFO     | mean x: 1766056603.2173274
[2025-12-18 12:22:44] 2025-12-18 17:15:14,221 | INFO     | mean y: 2645212.368575624
[2025-12-18 12:22:44] 2025-12-18 17:15:14,221 | INFO     | intersect: -11899220572.42595
[2025-12-18 12:22:44] 2025-12-18 17:15:14,222 | INFO     | chi2: 1.686201164027012
[2025-12-18 12:22:44] 2025-12-18 17:15:14,230 | INFO     | current memory leak: 6.74 B/s (using 681 data points, chi2=1.69)
[2025-12-18 12:22:44] 2025-12-18 17:15:14,231 | INFO     | could have reported an average CPU frequency of 2599 MHz (27 samples)
[2025-12-18 12:22:44] 2025-12-18 17:15:14,231 | INFO     | ..............................
[2025-12-18 12:22:44] 2025-12-18 17:15:14,232 | INFO     | . Timing measurements:
[2025-12-18 12:22:44] 2025-12-18 17:15:14,232 | INFO     | . get job = 0 s
[2025-12-18 12:22:44] 2025-12-18 17:15:14,232 | INFO     | . initial setup = 14 s
[2025-12-18 12:22:44] 2025-12-18 17:15:14,232 | INFO     | . payload setup = 82 s
[2025-12-18 12:22:44] 2025-12-18 17:15:14,232 | INFO     | . stage-in = 1 s
[2025-12-18 12:22:44] 2025-12-18 17:15:14,232 | INFO     | . payload execution = 43487 s
[2025-12-18 12:22:44] 2025-12-18 17:15:14,232 | INFO     | . stage-out = 5 s
[2025-12-18 12:22:44] 2025-12-18 17:15:14,232 | INFO     | . log creation = 1 s
[2025-12-18 12:22:44] 2025-12-18 17:15:14,232 | INFO     | ..............................
[2025-12-18 12:22:44] 2025-12-18 17:15:14,694 | INFO     | 
[2025-12-18 12:22:44] 2025-12-18 17:15:14,694 | INFO     | job summary report
[2025-12-18 12:22:44] 2025-12-18 17:15:14,694 | INFO     | --------------------------------------------------
[2025-12-18 12:22:44] 2025-12-18 17:15:14,694 | INFO     | PanDA job id: 6932674759
[2025-12-18 12:22:44] 2025-12-18 17:15:14,695 | INFO     | task id: 47898763
[2025-12-18 12:22:44] 2025-12-18 17:15:14,695 | INFO     | errors: (none)
[2025-12-18 12:22:44] 2025-12-18 17:15:14,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 12:22:44] 2025-12-18 17:15:14,695 | INFO     | pilot state: finished 
[2025-12-18 12:22:44] 2025-12-18 17:15:14,695 | INFO     | transexitcode: 0
[2025-12-18 12:22:44] 2025-12-18 17:15:14,695 | INFO     | exeerrorcode: 0
[2025-12-18 12:22:44] 2025-12-18 17:15:14,695 | INFO     | exeerrordiag: 
[2025-12-18 12:22:44] 2025-12-18 17:15:14,695 | INFO     | exitcode: 0
[2025-12-18 12:22:44] 2025-12-18 17:15:14,695 | INFO     | exitmsg: OK
[2025-12-18 12:22:44] 2025-12-18 17:15:14,695 | INFO     | cpuconsumptiontime: 73693 s
[2025-12-18 12:22:44] 2025-12-18 17:15:14,696 | INFO     | nevents: 400
[2025-12-18 12:22:44] 2025-12-18 17:15:14,696 | INFO     | neventsw: 0
[2025-12-18 12:22:44] 2025-12-18 17:15:14,696 | INFO     | pid: 4095120
[2025-12-18 12:22:44] 2025-12-18 17:15:14,696 | INFO     | pgrp: 4095120
[2025-12-18 12:22:44] 2025-12-18 17:15:14,696 | INFO     | corecount: 12
[2025-12-18 12:22:44] 2025-12-18 17:15:14,696 | INFO     | event service: False
[2025-12-18 12:22:44] 2025-12-18 17:15:14,696 | INFO     | sizes: {0: 2283130, 1: 2283731, 2: 2283815, 4: 2283871, 6: 2283871, 7: 2284042, 9: 2284198, 21: 2284226, 33: 2284254, 45: 2284310, 55: 2284600, 56: 2284908, 43575:
[2025-12-18 12:22:44] 2025-12-18 17:15:14,696 | INFO     | --------------------------------------------------
[2025-12-18 12:22:44] 2025-12-18 17:15:14,696 | INFO     | 
[2025-12-18 12:22:44] 2025-12-18 17:15:14,697 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-18 12:22:44] 2025-12-18 17:15:14,956 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,957 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,957 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,957 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,957 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,957 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,958 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,958 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,958 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,958 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,958 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,958 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,958 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 12:22:44] 2025-12-18 17:15:14,959 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,962 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 12:22:44] 2025-12-18 17:15:14,962 | INFO     | job 6932674759 has completed (purged errors)
[2025-12-18 12:22:44] 2025-12-18 17:15:14,962 | INFO     | overall cleanup function is called
[2025-12-18 12:22:44] 2025-12-18 17:15:15,979 | INFO     | --- collectZombieJob: --- 10, [4095120]
[2025-12-18 12:22:44] 2025-12-18 17:15:15,979 | INFO     | zombie collector waiting for pid 4095120
[2025-12-18 12:22:44] 2025-12-18 17:15:15,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 12:22:44] 2025-12-18 17:15:15,979 | INFO     | collected zombie processes
[2025-12-18 12:22:44] 2025-12-18 17:15:15,979 | INFO     | will attempt to kill all subprocesses of pid=4095120
[2025-12-18 12:22:44] 2025-12-18 17:15:17,499 | INFO     | process IDs to be killed: [4095120] (in reverse order)
[2025-12-18 12:22:44] 2025-12-18 17:15:17,650 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 12:22:44] 2025-12-18 17:15:17,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 12:22:44] 2025-12-18 17:15:17,680 | INFO     | did not find any defunct processes belonging to 4095120
[2025-12-18 12:22:44] 2025-12-18 17:15:17,716 | INFO     | did not find any defunct processes belonging to 4095120
[2025-12-18 12:22:44] 2025-12-18 17:15:17,717 | INFO     | ready for new job
[2025-12-18 12:22:44] 2025-12-18 17:15:17,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 12:22:44] 2025-12-18 17:15:17,734 | INFO     | ***************************************
[2025-12-18 12:22:44] 2025-12-18 17:15:17,747 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 12:22:44] 2025-12-18 17:15:17,747 | INFO     | ***************************************
[2025-12-18 12:22:44] 2025-12-18 17:15:17,747 | INFO     | 
[2025-12-18 12:22:44] 2025-12-18 17:15:17,749 | INFO     | architecture information:
[2025-12-18 12:22:44] 2025-12-18 17:15:17,757 | INFO     | executing command: cat /etc/os-release
[2025-12-18 12:22:44] 2025-12-18 17:15:17,901 | INFO     | cat /etc/os-release:
[2025-12-18 12:22:44] NAME="CentOS Linux"
[2025-12-18 12:22:44] VERSION="7 (Core)"
[2025-12-18 12:22:44] ID="centos"
[2025-12-18 12:22:44] ID_LIKE="rhel fedora"
[2025-12-18 12:22:44] VERSION_ID="7"
[2025-12-18 12:22:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 12:22:44] ANSI_COLOR="0;31"
[2025-12-18 12:22:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 12:22:44] HOME_URL="https://www.centos.org/"
[2025-12-18 12:22:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 12:22:44] 
[2025-12-18 12:22:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 12:22:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 12:22:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 12:22:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 12:22:44] 
[2025-12-18 12:22:44] 2025-12-18 17:15:17,902 | INFO     | ***************************************
[2025-12-18 12:22:44] 2025-12-18 17:15:18,404 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-18 12:22:44] 2025-12-18 17:15:18,466 | INFO     | sufficient remaining disk space (52544143360 B)
[2025-12-18 12:22:44] 2025-12-18 17:15:18,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 12:22:44] 2025-12-18 17:15:18,467 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 12:22:44] 2025-12-18 17:15:18,467 | INFO     | update_server=False
[2025-12-18 12:22:44] 2025-12-18 17:15:18,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 12:22:44] 2025-12-18 17:15:18,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 12:22:44] 2025-12-18 17:15:18,468 | INFO     | aborting loop
[2025-12-18 12:22:44] 2025-12-18 17:15:18,812 | INFO     | all payload control threads have been joined
[2025-12-18 12:22:44] 2025-12-18 17:15:18,980 | INFO     | all data control threads have been joined
[2025-12-18 12:22:44] 2025-12-18 17:15:19,024 | INFO     | all job control threads have been joined
[2025-12-18 12:22:44] 2025-12-18 17:15:19,473 | INFO     | [job] retrieve thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:19,474 | INFO     | [job] job monitor thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:19,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 12:22:44] 2025-12-18 17:15:19,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 12:22:44] 2025-12-18 17:15:19,771 | INFO     | [payload] failed_post thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:19,817 | INFO     | [payload] control thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:19,986 | INFO     | [data] control thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:20,030 | INFO     | [job] control thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:20,039 | INFO     | [data] copytool_in thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:20,088 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:20,088 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:20,174 | INFO     | [job] validate thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:20,493 | INFO     | [payload] validate_post thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:20,599 | INFO     | [job] queue monitor thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:20,669 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:20,940 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:21,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 12:22:44] 2025-12-18 17:15:21,710 | INFO     | [data] copytool_out thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:25,485 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 12:22:44] 2025-12-18 17:15:49,369 | INFO     | PID=4080119 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 12:22:44] 2025-12-18 17:15:49,369 | INFO     | .. there are 14 such processes running
[2025-12-18 12:22:44] 2025-12-18 17:15:49,370 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 12:22:44] 2025-12-18 17:15:49,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 12:22:44] 2025-12-18 17:15:49,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 12:22:44] 2025-12-18 17:16:01,454 | INFO     | [monitor] cgroup control has ended
[2025-12-18 12:22:44] 2025-12-18 17:16:02,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140366958049088)>', '<ExcThread(monitor, started 140366233724672)>']
[2025-12-18 12:22:44] 2025-12-18 17:16:03,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 12:22:44] 2025-12-18 17:16:03,478 | INFO     | [monitor] control thread has ended
[2025-12-18 12:22:44] 2025-12-18 17:16:07,914 | INFO     | all workflow threads have been joined
[2025-12-18 12:22:44] 2025-12-18 17:16:07,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 12:22:44] 2025-12-18 17:16:07,914 | INFO     | traces error code: 0
[2025-12-18 12:22:44] 2025-12-18 17:16:07,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 12:22:44] 2025-12-18 17:16:09,900 [wrapper] ==== pilot stdout END ====
[2025-12-18 12:22:44] 2025-12-18 17:16:09,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 12:22:44] 2025-12-18 17:16:09,905 [wrapper] pilotpid: 4080119
[2025-12-18 12:22:44] 2025-12-18 17:16:09,907 [wrapper] Pilot exit status: 0
[2025-12-18 12:22:44] 2025-12-18 17:16:10,035 [wrapper] pandaids: 6932674759
[2025-12-18 12:22:44] 2025-12-18 17:16:10,405 [wrapper] cleanup supervisor_pilot 1924084 4080120
[2025-12-18 12:22:44] 2025-12-18 17:16:10,417 [wrapper] Test setup, not cleaning
[2025-12-18 12:22:44] 2025-12-18 17:16:10,433 [wrapper] apfmon messages muted
[2025-12-18 12:22:44] 2025-12-18 17:16:10,456 [wrapper] ==== wrapper stdout END ====
[2025-12-18 12:22:44] 2025-12-18 17:16:10,481 [wrapper] ==== wrapper stderr END ====
[2025-12-18 12:22:44]  *** Error codes and diagnostics ***
[2025-12-18 12:22:44]     "exeErrorCode": 0,
[2025-12-18 12:22:44]     "exeErrorDiag": "",
[2025-12-18 12:22:44]     "pilotErrorCode": 0,
[2025-12-18 12:22:44]     "pilotErrorDiag": "",
[2025-12-18 12:22:44]  *** Listing of results directory ***
[2025-12-18 12:22:44] total 451288
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 17:04 pilot3.tar.gz
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 17:05 queuedata.json
[2025-12-18 12:22:44] -rwx------. 1 boincer umatlas     36322 Dec 17 17:05 runpilot2-wrapper.sh
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas       100 Dec 18 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 12:22:44] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 18 00:04 run_atlas
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas       105 Dec 18 00:04 job.xml
[2025-12-18 12:22:44] -rw-r--r--. 2 boincer umatlas 221833687 Dec 18 00:04 EVNT.47898761._000823.pool.root.1
[2025-12-18 12:22:44] -rw-r--r--. 2 boincer umatlas     15847 Dec 18 00:04 start_atlas.sh
[2025-12-18 12:22:44] drwxrwx--x. 2 boincer umatlas      4096 Dec 18 00:04 shared
[2025-12-18 12:22:44] -rw-r--r--. 2 boincer umatlas    592401 Dec 18 00:04 input.tar.gz
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas         0 Dec 18 00:04 boinc_lockfile
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas      2508 Dec 18 00:04 pandaJob.out
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas        57 Dec 18 00:04 setup.sh.local
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas    988110 Dec 18 00:06 agis_schedconf.cvmfs.json
[2025-12-18 12:22:44] drwx------. 5 boincer umatlas      4096 Dec 18 00:06 pilot3
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas 224713604 Dec 18 12:09 HITS.47898763._021397.pool.root.1
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas       530 Dec 18 12:09 boinc_task_state.xml
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas      1043 Dec 18 12:14 memory_monitor_summary.json
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas   1516240 Dec 18 12:14 agis_ddmendpoints.agis.ALL.json
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas    853314 Dec 18 12:14 log.47898763._021397.job.log.tgz.1
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas        95 Dec 18 12:14 pilot_heartbeat.json
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas      7829 Dec 18 12:15 heartbeat.json
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas      4824 Dec 18 12:16 pilotlog.txt
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas   4975177 Dec 18 12:16 log.47898763._021397.job.log.1
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas       357 Dec 18 12:16 output.list
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas       620 Dec 18 12:16 runtime_log
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas   5847040 Dec 18 12:16 result.tar.gz
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas      9345 Dec 18 12:16 runtime_log.err
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas       658 Dec 18 12:16 9jSNDmqpEq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrrcKDm9fBkum.diag
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas      6709 Dec 18 12:22 init_data.xml
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas        27 Dec 18 12:22 wrapper_checkpoint.txt
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas      8192 Dec 18 12:22 boinc_mmap_file
[2025-12-18 12:22:44] -rw-r--r--. 1 boincer umatlas     21282 Dec 18 12:22 stderr.txt
[2025-12-18 12:22:44] HITS file was successfully produced:
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas 224713604 Dec 18 12:09 shared/HITS.pool.root.1
[2025-12-18 12:22:44]  *** Contents of shared directory: ***
[2025-12-18 12:22:44] total 442396
[2025-12-18 12:22:44] -rw-r--r--. 2 boincer umatlas 221833687 Dec 18 00:04 ATLAS.root_0
[2025-12-18 12:22:44] -rw-r--r--. 2 boincer umatlas     15847 Dec 18 00:04 start_atlas.sh
[2025-12-18 12:22:44] -rw-r--r--. 2 boincer umatlas    592401 Dec 18 00:04 input.tar.gz
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas 224713604 Dec 18 12:09 HITS.pool.root.1
[2025-12-18 12:22:44] -rw-------. 1 boincer umatlas   5847040 Dec 18 12:16 result.tar.gz
12:22:46 (4073091): run_atlas exited; CPU time 74976.259619
12:22:46 (4073091): called boinc_finish(0)

</stderr_txt>
]]>

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