Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:59:26 (2305361): wrapper (7.7.26015): starting
13:59:26 (2305361): wrapper: running run_atlas (--nthreads 3)
[2025-12-18 13:59:26] Arguments: --nthreads 3
[2025-12-18 13:59:26] Threads: 3
[2025-12-18 13:59:26] Checking for CVMFS
[2025-12-18 13:59:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 13:59:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 13:59:26] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 13:59:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 13:59:26] 2.9.2.0 415797 7121 83304 154151 1 56 20834283 36864000 0 130560 0 4905871 99.990 255380 17360 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 13:59:26] CVMFS is ok
[2025-12-18 13:59:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 13:59:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 13:59:26] Further information can be found at the LHC@home message board.
[2025-12-18 13:59:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 13:59:26] Checking for apptainer binary...
[2025-12-18 13:59:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 13:59:26] Running /usr/bin/apptainer --version
[2025-12-18 13:59:26] apptainer version 1.4.1-1.1
[2025-12-18 13:59:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 13:59:26] magicA246a
[2025-12-18 13:59:26] apptainer works
[2025-12-18 13:59:26] Set ATHENA_PROC_NUMBER=3
[2025-12-18 13:59:26] Set ATHENA_CORE_NUMBER=3
[2025-12-18 13:59:26] Starting ATLAS job with PandaID=6932535369
[2025-12-18 13:59:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 15:37:05]  *** The last 200 lines of the pilot log: ***
[2025-12-18 15:37:05] 2025-12-18 14:36:36,296 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:36,298 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:36,315 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 15:37:05] 2025-12-18 14:36:36,499 | INFO     | [data] control thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:36,602 | INFO     | [job] control thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:36,908 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:36,993 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:37,064 | INFO     | [job] job monitor thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:37,075 | INFO     | [payload] control thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:37,167 | INFO     | [payload] failed_post thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:37,261 | INFO     | [data] copytool_in thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:37,695 | INFO     | [payload] validate_post thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:37,718 | INFO     | [job] validate thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:38,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 15:37:05] 2025-12-18 14:36:38,321 | INFO     | [data] copytool_out thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:38,342 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 15:37:05] 2025-12-18 14:36:39,212 | INFO     | [job] queue monitor thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:39,301 | INFO     | [monitor] cgroup control has ended
[2025-12-18 15:37:05] 2025-12-18 14:36:42,349 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 15:37:05] 2025-12-18 14:36:44,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762346219328)>', '<ExcThread(monitor, started 139761574467328)>']
[2025-12-18 15:37:05] 2025-12-18 14:36:49,166 | INFO     | all workflow threads have been joined
[2025-12-18 15:37:05] 2025-12-18 14:36:49,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 15:37:05] 2025-12-18 14:36:49,166 | INFO     | traces error code: 0
[2025-12-18 15:37:05] 2025-12-18 14:36:49,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 15:37:05] 2025-12-18 14:37:05,433 | INFO     | PID=2309088 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 15:37:05] 2025-12-18 14:37:05,434 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 15:37:05] 2025-12-18 14:37:05,434 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 15:37:05] 2025-12-18 14:37:05,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 15:37:05] 2025-12-18 14:37:05,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 15:37:05] 2025-12-18 14:37:05,434 | INFO     | [monitor] control thread has ended
[2025-12-18 15:37:05] 2025-12-18 14:37:05,483 [wrapper] ==== pilot stdout END ====
[2025-12-18 15:37:05] 2025-12-18 14:37:05,485 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 15:37:05] 2025-12-18 14:37:05,488 [wrapper] pilotpid: 2309088
[2025-12-18 15:37:05] 2025-12-18 14:37:05,490 [wrapper] Pilot exit status: 0
[2025-12-18 15:37:05] 2025-12-18 14:37:05,497 [wrapper] pandaids: 6932535369
[2025-12-18 15:37:05] 2025-12-18 14:37:05,514 [wrapper] cleanup supervisor_pilot 2328570 2309089
[2025-12-18 15:37:05] 2025-12-18 14:37:05,516 [wrapper] Test setup, not cleaning
[2025-12-18 15:37:05] 2025-12-18 14:37:05,519 [wrapper] apfmon messages muted
[2025-12-18 15:37:05] 2025-12-18 14:37:05,521 [wrapper] ==== wrapper stdout END ====
[2025-12-18 15:37:05] 2025-12-18 14:37:05,523 [wrapper] ==== wrapper stderr END ====
[2025-12-18 15:37:05]  *** Error codes and diagnostics ***
[2025-12-18 15:37:05]     "exeErrorCode": 0,
[2025-12-18 15:37:05]     "exeErrorDiag": "",
[2025-12-18 15:37:05]     "pilotErrorCode": 0,
[2025-12-18 15:37:05]     "pilotErrorDiag": "",
[2025-12-18 15:37:05]  *** Listing of results directory ***
[2025-12-18 15:37:05] total 526852
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc    579449 Dec 17 15:12 pilot3.tar.gz
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc      5112 Dec 17 15:14 queuedata.json
[2025-12-18 15:37:05] -rwx------ 1 boinc boinc     36322 Dec 17 15:17 runpilot2-wrapper.sh
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc       100 Dec 18 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 15:37:05] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 13:59 run_atlas
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc       105 Dec 18 13:59 job.xml
[2025-12-18 15:37:05] -rw-r--r-- 2 boinc boinc 292620894 Dec 18 13:59 EVNT.47929045._000021.pool.root.1
[2025-12-18 15:37:05] drwxrwx--x 2 boinc boinc      4096 Dec 18 13:59 shared
[2025-12-18 15:37:05] -rw-r--r-- 2 boinc boinc    592416 Dec 18 13:59 input.tar.gz
[2025-12-18 15:37:05] -rw-r--r-- 2 boinc boinc     15847 Dec 18 13:59 start_atlas.sh
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc         0 Dec 18 13:59 boinc_setup_complete
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc      6447 Dec 18 13:59 init_data.xml
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc         0 Dec 18 13:59 boinc_lockfile
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc      2590 Dec 18 13:59 pandaJob.out
[2025-12-18 15:37:05] -rw------- 1 boinc boinc    988141 Dec 18 13:59 agis_schedconf.cvmfs.json
[2025-12-18 15:37:05] -rw------- 1 boinc boinc   1516240 Dec 18 13:59 agis_ddmendpoints.agis.ALL.json
[2025-12-18 15:37:05] drwx------ 5 boinc boinc      4096 Dec 18 13:59 pilot3
[2025-12-18 15:37:05] -rw------- 1 boinc boinc 240741252 Dec 18 15:36 HITS.47929047._000517.pool.root.1
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc       530 Dec 18 15:36 boinc_task_state.xml
[2025-12-18 15:37:05] -rw------- 1 boinc boinc      1012 Dec 18 15:36 memory_monitor_summary.json
[2025-12-18 15:37:05] -rw------- 1 boinc boinc    272100 Dec 18 15:36 log.47929047._000517.job.log.tgz.1
[2025-12-18 15:37:05] -rw------- 1 boinc boinc      7742 Dec 18 15:36 heartbeat.json
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc        27 Dec 18 15:36 wrapper_checkpoint.txt
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc      8192 Dec 18 15:36 boinc_mmap_file
[2025-12-18 15:37:05] -rw------- 1 boinc boinc       747 Dec 18 15:37 pilotlog.txt
[2025-12-18 15:37:05] -rw------- 1 boinc boinc        95 Dec 18 15:37 pilot_heartbeat.json
[2025-12-18 15:37:05] -rw------- 1 boinc boinc    847883 Dec 18 15:37 log.47929047._000517.job.log.1
[2025-12-18 15:37:05] -rw------- 1 boinc boinc       357 Dec 18 15:37 output.list
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc       620 Dec 18 15:37 runtime_log
[2025-12-18 15:37:05] -rw------- 1 boinc boinc   1136640 Dec 18 15:37 result.tar.gz
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc      8917 Dec 18 15:37 runtime_log.err
[2025-12-18 15:37:05] -rw------- 1 boinc boinc       663 Dec 18 15:37 3XJODm6V7p8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmkXKDmy1l6Nm.diag
[2025-12-18 15:37:05] -rw-r--r-- 1 boinc boinc      6600 Dec 18 15:37 stderr.txt
[2025-12-18 15:37:05] HITS file was successfully produced:
[2025-12-18 15:37:05] -rw------- 1 boinc boinc 240741252 Dec 18 15:36 shared/HITS.pool.root.1
[2025-12-18 15:37:05]  *** Contents of shared directory: ***
[2025-12-18 15:37:05] total 522580
[2025-12-18 15:37:05] -rw-r--r-- 2 boinc boinc 292620894 Dec 18 13:59 ATLAS.root_0
[2025-12-18 15:37:05] -rw-r--r-- 2 boinc boinc    592416 Dec 18 13:59 input.tar.gz
[2025-12-18 15:37:05] -rw-r--r-- 2 boinc boinc     15847 Dec 18 13:59 start_atlas.sh
[2025-12-18 15:37:05] -rw------- 1 boinc boinc 240741252 Dec 18 15:36 HITS.pool.root.1
[2025-12-18 15:37:05] -rw------- 1 boinc boinc   1136640 Dec 18 15:37 result.tar.gz
15:37:07 (2305361): run_atlas exited; CPU time 16767.789517
15:37:07 (2305361): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN