Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:12:03 (20492): wrapper (7.7.26015): starting
20:12:03 (20492): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 20:12:03] Arguments: --nthreads 8
[2025-12-17 20:12:03] Threads: 8
[2025-12-17 20:12:03] Checking for CVMFS
[2025-12-17 20:12:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 20:12:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 20:12:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 20:12:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 20:12:03] 2.11.2.0 18601 132870 139128 154128 3 188 10421899 18432001 908 130560 0 93962596 99.985 4941202 31733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 20:12:03] CVMFS is ok
[2025-12-17 20:12:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 20:12:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 20:12:03] Further information can be found at the LHC@home message board.
[2025-12-17 20:12:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 20:12:03] Checking for apptainer binary...
[2025-12-17 20:12:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 20:12:03] Running /usr/bin/apptainer --version
[2025-12-17 20:12:03] apptainer version 1.3.2-1.el7
[2025-12-17 20:12:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 20:12:04] c-206-13.aglt2.org
[2025-12-17 20:12:04] apptainer works
[2025-12-17 20:12:04] Set ATHENA_PROC_NUMBER=8
[2025-12-17 20:12:04] Set ATHENA_CORE_NUMBER=8
[2025-12-17 20:12:04] Starting ATLAS job with PandaID=6932561511
[2025-12-17 20:12:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 00:27:49]  *** The last 200 lines of the pilot log: ***
[2025-12-18 00:27:49] 2025-12-18 05:27:00,455 | INFO     | right removable region: 244
[2025-12-18 00:27:49] 2025-12-18 05:27:00,455 | INFO     | sum of square deviations: 4560048290.0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,457 | INFO     | sum of deviations: 10708683711.999998
[2025-12-18 00:27:49] 2025-12-18 05:27:00,457 | INFO     | mean x: 1766028110.0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,457 | INFO     | mean y: 2490764.3836734695
[2025-12-18 00:27:49] 2025-12-18 05:27:00,457 | INFO     | intersect: -4144797872.4415174
[2025-12-18 00:27:49] 2025-12-18 05:27:00,457 | INFO     | chi2: 0.0030991295693843
[2025-12-18 00:27:49] 2025-12-18 05:27:00,457 | INFO     | current chi2=0.0030991295693843 (change=99.75228431933118 %)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,458 | INFO     | sum of square deviations: 4286517580.0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,459 | INFO     | sum of deviations: 9352795323.5
[2025-12-18 00:27:49] 2025-12-18 05:27:00,459 | INFO     | mean x: 1766028262.5
[2025-12-18 00:27:49] 2025-12-18 05:27:00,459 | INFO     | mean y: 2491527.129166667
[2025-12-18 00:27:49] 2025-12-18 05:27:00,459 | INFO     | intersect: -3850823096.318343
[2025-12-18 00:27:49] 2025-12-18 05:27:00,460 | INFO     | chi2: 0.0016733083633997598
[2025-12-18 00:27:49] 2025-12-18 05:27:00,460 | INFO     | current chi2=0.0016733083633997598 (change=46.00715052606872 %)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,460 | INFO     | sum of square deviations: 4024149870.0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,461 | INFO     | sum of deviations: 7678110748.000001
[2025-12-18 00:27:49] 2025-12-18 05:27:00,461 | INFO     | mean x: 1766028415.0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,462 | INFO     | mean y: 2492499.540425532
[2025-12-18 00:27:49] 2025-12-18 05:27:00,462 | INFO     | intersect: -3367104109.0682163
[2025-12-18 00:27:49] 2025-12-18 05:27:00,462 | INFO     | chi2: 0.0008522823503587321
[2025-12-18 00:27:49] 2025-12-18 05:27:00,462 | INFO     | current chi2=0.0008522823503587321 (change=49.06603176075093 %)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,462 | INFO     | sum of square deviations: 3772712597.5
[2025-12-18 00:27:49] 2025-12-18 05:27:00,464 | INFO     | sum of deviations: 6464131020.999998
[2025-12-18 00:27:49] 2025-12-18 05:27:00,464 | INFO     | mean x: 1766028567.5
[2025-12-18 00:27:49] 2025-12-18 05:27:00,464 | INFO     | mean y: 2493234.6695652176
[2025-12-18 00:27:49] 2025-12-18 05:27:00,464 | INFO     | intersect: -3023403849.2253704
[2025-12-18 00:27:49] 2025-12-18 05:27:00,464 | INFO     | chi2: 0.0004603339719914401
[2025-12-18 00:27:49] 2025-12-18 05:27:00,464 | INFO     | current chi2=0.0004603339719914401 (change=45.98809047287181 %)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,465 | INFO     | sum of square deviations: 3531973200.0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,466 | INFO     | sum of deviations: 5490586697.999999
[2025-12-18 00:27:49] 2025-12-18 05:27:00,466 | INFO     | mean x: 1766028720.0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,466 | INFO     | mean y: 2493850.9644444445
[2025-12-18 00:27:49] 2025-12-18 05:27:00,466 | INFO     | intersect: -2742864975.177828
[2025-12-18 00:27:49] 2025-12-18 05:27:00,466 | INFO     | chi2: 0.00023177957954882749
[2025-12-18 00:27:49] 2025-12-18 05:27:00,467 | INFO     | current chi2=0.00023177957954882749 (change=49.649690517923055 %)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,467 | INFO     | sum of square deviations: 3301699115.0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,468 | INFO     | sum of deviations: 5057524334.999996
[2025-12-18 00:27:49] 2025-12-18 05:27:00,468 | INFO     | mean x: 1766028872.5
[2025-12-18 00:27:49] 2025-12-18 05:27:00,468 | INFO     | mean y: 2494137.581818182
[2025-12-18 00:27:49] 2025-12-18 05:27:00,468 | INFO     | intersect: -2702699063.8227124
[2025-12-18 00:27:49] 2025-12-18 05:27:00,469 | INFO     | chi2: 0.00022713817321975543
[2025-12-18 00:27:49] 2025-12-18 05:27:00,469 | INFO     | current chi2=0.00022713817321975543 (change=2.0025087361478637 %)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,469 | INFO     | left removable region: 60
[2025-12-18 00:27:49] 2025-12-18 05:27:00,469 | INFO     | sum of square deviations: 1931608310.0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,470 | INFO     | sum of deviations: 2593049518.5
[2025-12-18 00:27:49] 2025-12-18 05:27:00,470 | INFO     | mean x: 1766029604.5
[2025-12-18 00:27:49] 2025-12-18 05:27:00,470 | INFO     | mean y: 2495845.777173913
[2025-12-18 00:27:49] 2025-12-18 05:27:00,470 | INFO     | intersect: -2368275801.8170896
[2025-12-18 00:27:49] 2025-12-18 05:27:00,471 | INFO     | chi2: 0.0001501841421826292
[2025-12-18 00:27:49] 2025-12-18 05:27:00,471 | INFO     | current memory leak: 1.34 B/s (using 184 data points, chi2=0.00)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,471 | INFO     | could have reported an average CPU frequency of 2416 MHz (12 samples)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,471 | INFO     | ..............................
[2025-12-18 00:27:49] 2025-12-18 05:27:00,471 | INFO     | . Timing measurements:
[2025-12-18 00:27:49] 2025-12-18 05:27:00,472 | INFO     | . get job = 0 s
[2025-12-18 00:27:49] 2025-12-18 05:27:00,472 | INFO     | . initial setup = 2 s
[2025-12-18 00:27:49] 2025-12-18 05:27:00,472 | INFO     | . payload setup = 5 s
[2025-12-18 00:27:49] 2025-12-18 05:27:00,472 | INFO     | . stage-in = 0 s
[2025-12-18 00:27:49] 2025-12-18 05:27:00,472 | INFO     | . payload execution = 15249 s
[2025-12-18 00:27:49] 2025-12-18 05:27:00,472 | INFO     | . stage-out = 2 s
[2025-12-18 00:27:49] 2025-12-18 05:27:00,472 | INFO     | . log creation = 0 s
[2025-12-18 00:27:49] 2025-12-18 05:27:00,472 | INFO     | ..............................
[2025-12-18 00:27:49] 2025-12-18 05:27:00,891 | INFO     | 
[2025-12-18 00:27:49] 2025-12-18 05:27:00,891 | INFO     | job summary report
[2025-12-18 00:27:49] 2025-12-18 05:27:00,892 | INFO     | --------------------------------------------------
[2025-12-18 00:27:49] 2025-12-18 05:27:00,892 | INFO     | PanDA job id: 6932561511
[2025-12-18 00:27:49] 2025-12-18 05:27:00,892 | INFO     | task id: 47898763
[2025-12-18 00:27:49] 2025-12-18 05:27:00,892 | INFO     | errors: (none)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 00:27:49] 2025-12-18 05:27:00,892 | INFO     | pilot state: finished 
[2025-12-18 00:27:49] 2025-12-18 05:27:00,893 | INFO     | transexitcode: 0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,893 | INFO     | exeerrorcode: 0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,893 | INFO     | exeerrordiag: 
[2025-12-18 00:27:49] 2025-12-18 05:27:00,893 | INFO     | exitcode: 0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,893 | INFO     | exitmsg: OK
[2025-12-18 00:27:49] 2025-12-18 05:27:00,893 | INFO     | cpuconsumptiontime: 117476 s
[2025-12-18 00:27:49] 2025-12-18 05:27:00,894 | INFO     | nevents: 400
[2025-12-18 00:27:49] 2025-12-18 05:27:00,894 | INFO     | neventsw: 0
[2025-12-18 00:27:49] 2025-12-18 05:27:00,894 | INFO     | pid: 7524
[2025-12-18 00:27:49] 2025-12-18 05:27:00,894 | INFO     | pgrp: 7524
[2025-12-18 00:27:49] 2025-12-18 05:27:00,894 | INFO     | corecount: 8
[2025-12-18 00:27:49] 2025-12-18 05:27:00,894 | INFO     | event service: False
[2025-12-18 00:27:49] 2025-12-18 05:27:00,895 | INFO     | sizes: {0: 2283958, 4: 2284220, 11: 2284248, 15258: 2315259, 15262: 2324313, 15268: 2324451}
[2025-12-18 00:27:49] 2025-12-18 05:27:00,895 | INFO     | --------------------------------------------------
[2025-12-18 00:27:49] 2025-12-18 05:27:00,895 | INFO     | 
[2025-12-18 00:27:49] 2025-12-18 05:27:00,895 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-18 00:27:49] 2025-12-18 05:27:00,912 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 00:27:49] 2025-12-18 05:27:00,916 | INFO     | job 6932561511 has completed (purged errors)
[2025-12-18 00:27:49] 2025-12-18 05:27:00,917 | INFO     | overall cleanup function is called
[2025-12-18 00:27:49] 2025-12-18 05:27:01,925 | INFO     | --- collectZombieJob: --- 10, [7524]
[2025-12-18 00:27:49] 2025-12-18 05:27:01,926 | INFO     | zombie collector waiting for pid 7524
[2025-12-18 00:27:49] 2025-12-18 05:27:01,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 00:27:49] 2025-12-18 05:27:01,926 | INFO     | collected zombie processes
[2025-12-18 00:27:49] 2025-12-18 05:27:01,926 | INFO     | will attempt to kill all subprocesses of pid=7524
[2025-12-18 00:27:49] 2025-12-18 05:27:02,093 | INFO     | process IDs to be killed: [7524] (in reverse order)
[2025-12-18 00:27:49] 2025-12-18 05:27:02,161 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 00:27:49] 2025-12-18 05:27:02,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 00:27:49] 2025-12-18 05:27:02,164 | INFO     | did not find any defunct processes belonging to 7524
[2025-12-18 00:27:49] 2025-12-18 05:27:02,167 | INFO     | did not find any defunct processes belonging to 7524
[2025-12-18 00:27:49] 2025-12-18 05:27:02,167 | INFO     | ready for new job
[2025-12-18 00:27:49] 2025-12-18 05:27:02,167 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 00:27:49] 2025-12-18 05:27:02,169 | INFO     | ***************************************
[2025-12-18 00:27:49] 2025-12-18 05:27:02,169 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 00:27:49] 2025-12-18 05:27:02,169 | INFO     | ***************************************
[2025-12-18 00:27:49] 2025-12-18 05:27:02,169 | INFO     | 
[2025-12-18 00:27:49] 2025-12-18 05:27:02,170 | INFO     | architecture information:
[2025-12-18 00:27:49] 2025-12-18 05:27:02,170 | INFO     | executing command: cat /etc/os-release
[2025-12-18 00:27:49] 2025-12-18 05:27:02,182 | INFO     | cat /etc/os-release:
[2025-12-18 00:27:49] NAME="CentOS Linux"
[2025-12-18 00:27:49] VERSION="7 (Core)"
[2025-12-18 00:27:49] ID="centos"
[2025-12-18 00:27:49] ID_LIKE="rhel fedora"
[2025-12-18 00:27:49] VERSION_ID="7"
[2025-12-18 00:27:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 00:27:49] ANSI_COLOR="0;31"
[2025-12-18 00:27:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 00:27:49] HOME_URL="https://www.centos.org/"
[2025-12-18 00:27:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 00:27:49] 
[2025-12-18 00:27:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 00:27:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 00:27:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 00:27:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 00:27:49] 
[2025-12-18 00:27:49] 2025-12-18 05:27:02,183 | INFO     | ***************************************
[2025-12-18 00:27:49] 2025-12-18 05:27:02,686 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-18 00:27:49] 2025-12-18 05:27:02,710 | INFO     | sufficient remaining disk space (28455206912 B)
[2025-12-18 00:27:49] 2025-12-18 05:27:02,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 00:27:49] 2025-12-18 05:27:02,711 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 00:27:49] 2025-12-18 05:27:02,711 | INFO     | update_server=False
[2025-12-18 00:27:49] 2025-12-18 05:27:02,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 00:27:49] 2025-12-18 05:27:02,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 00:27:49] 2025-12-18 05:27:02,846 | INFO     | all data control threads have been joined
[2025-12-18 00:27:49] 2025-12-18 05:27:02,954 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-18 00:27:49] 2025-12-18 05:27:02,955 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-18 00:27:49] 2025-12-18 05:27:02,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 00:27:49] 2025-12-18 05:27:02,955 | INFO     | will abort loop
[2025-12-18 00:27:49] 2025-12-18 05:27:03,717 | INFO     | [job] retrieve thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:03,776 | INFO     | all payload control threads have been joined
[2025-12-18 00:27:49] 2025-12-18 05:27:03,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:03,838 | INFO     | [payload] failed_post thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:03,852 | INFO     | [data] control thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:03,920 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:03,961 | INFO     | [job] job monitor thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:04,065 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:04,262 | INFO     | [job] validate thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:04,289 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:04,299 | INFO     | [data] copytool_in thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:04,403 | INFO     | all job control threads have been joined
[2025-12-18 00:27:49] 2025-12-18 05:27:04,717 | INFO     | [data] copytool_out thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:04,782 | INFO     | [payload] control thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:05,009 | INFO     | [payload] validate_post thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:05,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 00:27:49] 2025-12-18 05:27:05,411 | INFO     | [job] control thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:05,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 00:27:49] 2025-12-18 05:27:06,606 | INFO     | [job] queue monitor thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:09,238 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 00:27:49] 2025-12-18 05:27:15,625 [wrapper] supervise_pilot (15 min periods counter: 18)
[2025-12-18 00:27:49] 2025-12-18 05:27:32,491 | INFO     | PID=26065 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-18 00:27:49] 2025-12-18 05:27:32,491 | INFO     | .. there are 3 such processes running
[2025-12-18 00:27:49] 2025-12-18 05:27:32,492 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 00:27:49] 2025-12-18 05:27:32,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 00:27:49] 2025-12-18 05:27:32,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 00:27:49] 2025-12-18 05:27:41,874 | INFO     | [monitor] cgroup control has ended
[2025-12-18 00:27:49] 2025-12-18 05:27:43,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683301099328)>', '<ExcThread(monitor, started 140683074111232)>']
[2025-12-18 00:27:49] 2025-12-18 05:27:44,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 00:27:49] 2025-12-18 05:27:44,545 | INFO     | [monitor] control thread has ended
[2025-12-18 00:27:49] 2025-12-18 05:27:48,786 | INFO     | all workflow threads have been joined
[2025-12-18 00:27:49] 2025-12-18 05:27:48,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 00:27:49] 2025-12-18 05:27:48,787 | INFO     | traces error code: 0
[2025-12-18 00:27:49] 2025-12-18 05:27:48,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 00:27:49] 2025-12-18 05:27:48,907 [wrapper] ==== pilot stdout END ====
[2025-12-18 00:27:49] 2025-12-18 05:27:48,909 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 00:27:49] 2025-12-18 05:27:48,911 [wrapper] pilotpid: 26065
[2025-12-18 00:27:49] 2025-12-18 05:27:48,913 [wrapper] Pilot exit status: 0
[2025-12-18 00:27:49] 2025-12-18 05:27:48,920 [wrapper] pandaids: 6932561511
[2025-12-18 00:27:49] 2025-12-18 05:27:48,954 [wrapper] cleanup supervisor_pilot 12705 26066
[2025-12-18 00:27:49] 2025-12-18 05:27:48,957 [wrapper] Test setup, not cleaning
[2025-12-18 00:27:49] 2025-12-18 05:27:48,960 [wrapper] apfmon messages muted
[2025-12-18 00:27:49] 2025-12-18 05:27:48,962 [wrapper] ==== wrapper stdout END ====
[2025-12-18 00:27:49] 2025-12-18 05:27:48,965 [wrapper] ==== wrapper stderr END ====
[2025-12-18 00:27:49]  *** Error codes and diagnostics ***
[2025-12-18 00:27:49]     "exeErrorCode": 0,
[2025-12-18 00:27:49]     "exeErrorDiag": "",
[2025-12-18 00:27:49]     "pilotErrorCode": 0,
[2025-12-18 00:27:49]     "pilotErrorDiag": "",
[2025-12-18 00:27:49]  *** Listing of results directory ***
[2025-12-18 00:27:49] total 443220
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas    579449 Dec 17 14:55 pilot3.tar.gz
[2025-12-18 00:27:49] -rwx------ 1 boincer umatlas     36322 Dec 17 14:58 runpilot2-wrapper.sh
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas      5112 Dec 17 14:59 queuedata.json
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas       100 Dec 17 20:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 00:27:49] -rwxr-xr-x 1 boincer umatlas      7986 Dec 17 20:12 run_atlas
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas       105 Dec 17 20:12 job.xml
[2025-12-18 00:27:49] -rw-r--r-- 2 boincer umatlas 225739217 Dec 17 20:12 EVNT.47898761._000813.pool.root.1
[2025-12-18 00:27:49] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 20:12 start_atlas.sh
[2025-12-18 00:27:49] drwxrwx--x 2 boincer umatlas      4096 Dec 17 20:12 shared
[2025-12-18 00:27:49] -rw-r--r-- 2 boincer umatlas    592399 Dec 17 20:12 input.tar.gz
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas         0 Dec 17 20:12 boinc_lockfile
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas      2508 Dec 17 20:12 pandaJob.out
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas        57 Dec 17 20:12 setup.sh.local
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas    988134 Dec 17 20:12 agis_schedconf.cvmfs.json
[2025-12-18 00:27:49] drwx------ 5 boincer umatlas      4096 Dec 17 20:12 pilot3
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas      5952 Dec 18 00:18 init_data.xml
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas 218959501 Dec 18 00:26 HITS.47898763._021117.pool.root.1
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas       531 Dec 18 00:26 boinc_task_state.xml
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas      1054 Dec 18 00:26 memory_monitor_summary.json
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas   1516240 Dec 18 00:26 agis_ddmendpoints.agis.ALL.json
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas    481618 Dec 18 00:26 log.47898763._021117.job.log.tgz.1
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas      7857 Dec 18 00:27 heartbeat.json
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas        95 Dec 18 00:27 pilot_heartbeat.json
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas      8192 Dec 18 00:27 boinc_mmap_file
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas        29 Dec 18 00:27 wrapper_checkpoint.txt
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas      5007 Dec 18 00:27 pilotlog.txt
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas   2137631 Dec 18 00:27 log.47898763._021117.job.log.1
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas       357 Dec 18 00:27 output.list
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas       620 Dec 18 00:27 runtime_log
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas   2641920 Dec 18 00:27 result.tar.gz
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas       663 Dec 18 00:27 ykbKDmaqCq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmU6XKDmRgzqwm.diag
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas      9343 Dec 18 00:27 runtime_log.err
[2025-12-18 00:27:49] -rw-r--r-- 1 boincer umatlas     20954 Dec 18 00:27 stderr.txt
[2025-12-18 00:27:49] HITS file was successfully produced:
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas 218959501 Dec 18 00:26 shared/HITS.pool.root.1
[2025-12-18 00:27:49]  *** Contents of shared directory: ***
[2025-12-18 00:27:49] total 437464
[2025-12-18 00:27:49] -rw-r--r-- 2 boincer umatlas 225739217 Dec 17 20:12 ATLAS.root_0
[2025-12-18 00:27:49] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 20:12 start_atlas.sh
[2025-12-18 00:27:49] -rw-r--r-- 2 boincer umatlas    592399 Dec 17 20:12 input.tar.gz
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas 218959501 Dec 18 00:26 HITS.pool.root.1
[2025-12-18 00:27:49] -rw------- 1 boincer umatlas   2641920 Dec 18 00:27 result.tar.gz
00:27:50 (20492): run_atlas exited; CPU time 117696.621408
00:27:50 (20492): called boinc_finish(0)

</stderr_txt>
]]>

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