Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:42 (2690852): wrapper (7.7.26015): starting
00:01:42 (2690852): wrapper: running run_atlas (--nthreads 12)
[2025-12-18 00:01:42] Arguments: --nthreads 12
[2025-12-18 00:01:42] Threads: 12
[2025-12-18 00:01:42] Checking for CVMFS
[2025-12-18 00:01:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 00:01:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 00:01:43] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 00:01:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 00:01:44] 2.13.3.0 5210 21945 317568 154134 1 535 30586582 32935936 19199 16776704 0 54824094 99.329 96590041 32854 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-18 00:01:44] CVMFS is ok
[2025-12-18 00:01:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 00:01:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 00:01:44] Further information can be found at the LHC@home message board.
[2025-12-18 00:01:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 00:01:44] Checking for apptainer binary...
[2025-12-18 00:01:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 00:01:44] Running /usr/bin/apptainer --version
[2025-12-18 00:01:44] apptainer version 1.4.5-2.el9
[2025-12-18 00:01:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 00:01:45] c6-1-26-2.aglt2.org
[2025-12-18 00:01:45] apptainer works
[2025-12-18 00:01:45] Set ATHENA_PROC_NUMBER=12
[2025-12-18 00:01:45] Set ATHENA_CORE_NUMBER=12
[2025-12-18 00:01:45] Starting ATLAS job with PandaID=6932561292
[2025-12-18 00:01:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 07:03:47]  *** The last 200 lines of the pilot log: ***
[2025-12-18 07:03:47] 2025-12-18 12:02:44,913 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 07:03:47] 2025-12-18 12:02:44,920 | INFO     | fitting pss+swap vs Time
[2025-12-18 07:03:47] 2025-12-18 12:02:44,921 | INFO     | sum of square deviations: 21527175681.167885
[2025-12-18 07:03:47] 2025-12-18 12:02:44,924 | INFO     | sum of deviations: 10803443639.000011
[2025-12-18 07:03:47] 2025-12-18 12:02:44,924 | INFO     | mean x: 1766046799.437956
[2025-12-18 07:03:47] 2025-12-18 12:02:44,924 | INFO     | mean y: 2238256.0
[2025-12-18 07:03:47] 2025-12-18 12:02:44,925 | INFO     | intersect: -884054834.3776239
[2025-12-18 07:03:47] 2025-12-18 12:02:44,925 | INFO     | chi2: 8.337969179286503
[2025-12-18 07:03:47] 2025-12-18 12:02:44,926 | INFO     | sum of square deviations: 20751183233.202095
[2025-12-18 07:03:47] 2025-12-18 12:02:44,937 | INFO     | sum of deviations: 132082630041.60092
[2025-12-18 07:03:47] 2025-12-18 12:02:44,937 | INFO     | mean x: 1766046646.955665
[2025-12-18 07:03:47] 2025-12-18 12:02:44,937 | INFO     | mean y: 2262079.4778325125
[2025-12-18 07:03:47] 2025-12-18 12:02:44,937 | INFO     | intersect: -11238739615.92574
[2025-12-18 07:03:47] 2025-12-18 12:02:44,938 | INFO     | chi2: 4.355273281356184
[2025-12-18 07:03:47] 2025-12-18 12:02:44,938 | INFO     | current chi2=4.355273281356184 (change=47.76577860019298 %)
[2025-12-18 07:03:47] 2025-12-18 12:02:44,938 | INFO     | sum of square deviations: 19994024965.8604
[2025-12-18 07:03:47] 2025-12-18 12:02:44,943 | INFO     | sum of deviations: 181379053229.621
[2025-12-18 07:03:47] 2025-12-18 12:02:44,944 | INFO     | mean x: 1766046494.468828
[2025-12-18 07:03:47] 2025-12-18 12:02:44,944 | INFO     | mean y: 2271935.1296758107
[2025-12-18 07:03:47] 2025-12-18 12:02:44,944 | INFO     | intersect: -16018706415.812515
[2025-12-18 07:03:47] 2025-12-18 12:02:44,944 | INFO     | chi2: 2.80613239237476
[2025-12-18 07:03:47] 2025-12-18 12:02:44,944 | INFO     | current chi2=2.80613239237476 (change=35.569315377129186 %)
[2025-12-18 07:03:47] 2025-12-18 12:02:44,945 | INFO     | sum of square deviations: 19255445559.74752
[2025-12-18 07:03:47] 2025-12-18 12:02:44,961 | INFO     | sum of deviations: 179560333915.17206
[2025-12-18 07:03:47] 2025-12-18 12:02:44,961 | INFO     | mean x: 1766046341.9747474
[2025-12-18 07:03:47] 2025-12-18 12:02:44,961 | INFO     | mean y: 2271558.717171717
[2025-12-18 07:03:47] 2025-12-18 12:02:44,961 | INFO     | intersect: -16466413618.71436
[2025-12-18 07:03:47] 2025-12-18 12:02:44,962 | INFO     | chi2: 2.803378016260395
[2025-12-18 07:03:47] 2025-12-18 12:02:44,962 | INFO     | current chi2=2.803378016260395 (change=0.09815560099193855 %)
[2025-12-18 07:03:47] 2025-12-18 12:02:44,962 | INFO     | right removable region: 395
[2025-12-18 07:03:47] 2025-12-18 12:02:44,963 | INFO     | sum of square deviations: 20750822723.2021
[2025-12-18 07:03:47] 2025-12-18 12:02:44,973 | INFO     | sum of deviations: -78724906476.19713
[2025-12-18 07:03:47] 2025-12-18 12:02:44,973 | INFO     | mean x: 1766046951.955665
[2025-12-18 07:03:47] 2025-12-18 12:02:44,973 | INFO     | mean y: 2255803.433497537
[2025-12-18 07:03:47] 2025-12-18 12:02:44,973 | INFO     | intersect: 6702321770.930157
[2025-12-18 07:03:47] 2025-12-18 12:02:44,973 | INFO     | chi2: 6.100348151522945
[2025-12-18 07:03:47] 2025-12-18 12:02:44,974 | INFO     | current chi2=6.100348151522945 (change=26.836523134702162 %)
[2025-12-18 07:03:47] 2025-12-18 12:02:44,974 | INFO     | sum of square deviations: 19993353839.97506
[2025-12-18 07:03:47] 2025-12-18 12:02:44,977 | INFO     | sum of deviations: -112121530344.01495
[2025-12-18 07:03:47] 2025-12-18 12:02:44,977 | INFO     | mean x: 1766047104.4738154
[2025-12-18 07:03:47] 2025-12-18 12:02:44,977 | INFO     | mean y: 2262511.2842892767
[2025-12-18 07:03:47] 2025-12-18 12:02:44,978 | INFO     | intersect: 9906148852.619987
[2025-12-18 07:03:47] 2025-12-18 12:02:44,978 | INFO     | chi2: 5.764902333866108
[2025-12-18 07:03:47] 2025-12-18 12:02:44,978 | INFO     | current chi2=5.764902333866108 (change=5.498797926362495 %)
[2025-12-18 07:03:47] 2025-12-18 12:02:44,978 | INFO     | left removable region: 20
[2025-12-18 07:03:47] 2025-12-18 12:02:44,979 | INFO     | sum of square deviations: 16351198979.59996
[2025-12-18 07:03:47] 2025-12-18 12:02:44,981 | INFO     | sum of deviations: 49652565101.07992
[2025-12-18 07:03:47] 2025-12-18 12:02:44,982 | INFO     | mean x: 1766046921.52
[2025-12-18 07:03:47] 2025-12-18 12:02:44,982 | INFO     | mean y: 2299251.256
[2025-12-18 07:03:47] 2025-12-18 12:02:44,982 | INFO     | intersect: -5360534376.524789
[2025-12-18 07:03:47] 2025-12-18 12:02:44,982 | INFO     | chi2: 0.12498459296387346
[2025-12-18 07:03:47] 2025-12-18 12:02:44,982 | INFO     | current memory leak: 3.04 B/s (using 375 data points, chi2=0.12)
[2025-12-18 07:03:47] 2025-12-18 12:02:44,983 | INFO     | could have reported an average CPU frequency of 2884 MHz (17 samples)
[2025-12-18 07:03:47] 2025-12-18 12:02:44,983 | INFO     | ..............................
[2025-12-18 07:03:47] 2025-12-18 12:02:44,983 | INFO     | . Timing measurements:
[2025-12-18 07:03:47] 2025-12-18 12:02:44,983 | INFO     | . get job = 0 s
[2025-12-18 07:03:47] 2025-12-18 12:02:44,983 | INFO     | . initial setup = 6 s
[2025-12-18 07:03:47] 2025-12-18 12:02:44,984 | INFO     | . payload setup = 34 s
[2025-12-18 07:03:47] 2025-12-18 12:02:44,984 | INFO     | . stage-in = 0 s
[2025-12-18 07:03:47] 2025-12-18 12:02:44,984 | INFO     | . payload execution = 25038 s
[2025-12-18 07:03:47] 2025-12-18 12:02:44,984 | INFO     | . stage-out = 9 s
[2025-12-18 07:03:47] 2025-12-18 12:02:44,984 | INFO     | . log creation = 1 s
[2025-12-18 07:03:47] 2025-12-18 12:02:44,984 | INFO     | ..............................
[2025-12-18 07:03:47] 2025-12-18 12:02:45,358 | INFO     | 
[2025-12-18 07:03:47] 2025-12-18 12:02:45,358 | INFO     | job summary report
[2025-12-18 07:03:47] 2025-12-18 12:02:45,358 | INFO     | --------------------------------------------------
[2025-12-18 07:03:47] 2025-12-18 12:02:45,358 | INFO     | PanDA job id: 6932561292
[2025-12-18 07:03:47] 2025-12-18 12:02:45,358 | INFO     | task id: 47886933
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | errors: (none)
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | pilot state: finished 
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | transexitcode: 0
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | exeerrorcode: 0
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | exeerrordiag: 
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | exitcode: 0
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | exitmsg: OK
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | cpuconsumptiontime: 46176 s
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | nevents: 400
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | neventsw: 0
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | pid: 2706174
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | pgrp: 2706174
[2025-12-18 07:03:47] 2025-12-18 12:02:45,359 | INFO     | corecount: 12
[2025-12-18 07:03:47] 2025-12-18 12:02:45,360 | INFO     | event service: False
[2025-12-18 07:03:47] 2025-12-18 12:02:45,360 | INFO     | sizes: {0: 2283798, 1: 2283997, 13: 2283997, 23: 2284053, 29: 2284343, 34: 2284371, 25078: 2319457, 25079: 2319456, 25091: 2328510, 25097: 2328566, 25134: 2328824}
[2025-12-18 07:03:47] 2025-12-18 12:02:45,360 | INFO     | --------------------------------------------------
[2025-12-18 07:03:47] 2025-12-18 12:02:45,360 | INFO     | 
[2025-12-18 07:03:47] 2025-12-18 12:02:45,360 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-18 07:03:47] 2025-12-18 12:02:45,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,504 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 07:03:47] 2025-12-18 12:02:45,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 07:03:47] 2025-12-18 12:02:45,546 | INFO     | job 6932561292 has completed (purged errors)
[2025-12-18 07:03:47] 2025-12-18 12:02:45,546 | INFO     | overall cleanup function is called
[2025-12-18 07:03:47] 2025-12-18 12:02:46,554 | INFO     | --- collectZombieJob: --- 10, [2706174]
[2025-12-18 07:03:47] 2025-12-18 12:02:46,555 | INFO     | zombie collector waiting for pid 2706174
[2025-12-18 07:03:47] 2025-12-18 12:02:46,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 07:03:47] 2025-12-18 12:02:46,555 | INFO     | collected zombie processes
[2025-12-18 07:03:47] 2025-12-18 12:02:46,555 | INFO     | will attempt to kill all subprocesses of pid=2706174
[2025-12-18 07:03:47] 2025-12-18 12:02:51,491 | INFO     | process IDs to be killed: [2706174] (in reverse order)
[2025-12-18 07:03:47] 2025-12-18 12:02:52,205 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 07:03:47] 2025-12-18 12:02:52,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 07:03:47] 2025-12-18 12:02:52,395 | INFO     | did not find any defunct processes belonging to 2706174
[2025-12-18 07:03:47] 2025-12-18 12:02:52,507 | INFO     | did not find any defunct processes belonging to 2706174
[2025-12-18 07:03:47] 2025-12-18 12:02:52,507 | INFO     | ready for new job
[2025-12-18 07:03:47] 2025-12-18 12:02:52,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 07:03:47] 2025-12-18 12:02:52,531 | INFO     | ***************************************
[2025-12-18 07:03:47] 2025-12-18 12:02:52,531 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 07:03:47] 2025-12-18 12:02:52,531 | INFO     | ***************************************
[2025-12-18 07:03:47] 2025-12-18 12:02:52,531 | INFO     | 
[2025-12-18 07:03:47] 2025-12-18 12:02:52,571 | INFO     | architecture information:
[2025-12-18 07:03:47] 2025-12-18 12:02:52,576 | INFO     | executing command: cat /etc/os-release
[2025-12-18 07:03:47] 2025-12-18 12:02:52,697 | INFO     | cat /etc/os-release:
[2025-12-18 07:03:47] NAME="CentOS Linux"
[2025-12-18 07:03:47] VERSION="7 (Core)"
[2025-12-18 07:03:47] ID="centos"
[2025-12-18 07:03:47] ID_LIKE="rhel fedora"
[2025-12-18 07:03:47] VERSION_ID="7"
[2025-12-18 07:03:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 07:03:47] ANSI_COLOR="0;31"
[2025-12-18 07:03:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 07:03:47] HOME_URL="https://www.centos.org/"
[2025-12-18 07:03:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 07:03:47] 
[2025-12-18 07:03:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 07:03:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 07:03:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 07:03:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 07:03:47] 
[2025-12-18 07:03:47] 2025-12-18 12:02:52,697 | INFO     | ***************************************
[2025-12-18 07:03:47] 2025-12-18 12:02:53,207 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-18 07:03:47] 2025-12-18 12:02:53,410 | INFO     | sufficient remaining disk space (74274832384 B)
[2025-12-18 07:03:47] 2025-12-18 12:02:53,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 07:03:47] 2025-12-18 12:02:53,411 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 07:03:47] 2025-12-18 12:02:53,411 | INFO     | update_server=False
[2025-12-18 07:03:47] 2025-12-18 12:02:53,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 07:03:47] 2025-12-18 12:02:53,689 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-18 07:03:47] 2025-12-18 12:02:53,690 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-18 07:03:47] 2025-12-18 12:02:53,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 07:03:47] 2025-12-18 12:02:53,690 | INFO     | will abort loop
[2025-12-18 07:03:47] 2025-12-18 12:02:53,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 07:03:47] 2025-12-18 12:02:54,114 | INFO     | all job control threads have been joined
[2025-12-18 07:03:47] 2025-12-18 12:02:54,371 | INFO     | all data control threads have been joined
[2025-12-18 07:03:47] 2025-12-18 12:02:54,429 | INFO     | [job] retrieve thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:54,483 | INFO     | all payload control threads have been joined
[2025-12-18 07:03:47] 2025-12-18 12:02:54,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 07:03:47] 2025-12-18 12:02:54,746 | INFO     | [job] job monitor thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:54,772 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:54,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 07:03:47] 2025-12-18 12:02:55,015 | INFO     | [job] validate thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,121 | INFO     | [job] control thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,159 | INFO     | [payload] failed_post thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,163 | INFO     | [data] copytool_in thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,377 | INFO     | [data] control thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,497 | INFO     | [payload] control thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,632 | INFO     | [job] queue monitor thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,634 | INFO     | [payload] validate_post thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,657 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,823 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:55,836 | INFO     | [data] copytool_out thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:02:58,962 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 07:03:47] 2025-12-18 12:03:20,488 | INFO     | PID=2695047 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 07:03:47] 2025-12-18 12:03:20,488 | INFO     | .. there are 25 such processes running
[2025-12-18 07:03:47] 2025-12-18 12:03:20,489 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 07:03:47] 2025-12-18 12:03:20,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 07:03:47] 2025-12-18 12:03:20,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 07:03:47] 2025-12-18 12:03:36,904 | INFO     | [monitor] cgroup control has ended
[2025-12-18 07:03:47] 2025-12-18 12:03:37,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243721172800)>', '<ExcThread(monitor, started 140243072173824)>']
[2025-12-18 07:03:47] 2025-12-18 12:03:37,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 07:03:47] 2025-12-18 12:03:37,679 | INFO     | [monitor] control thread has ended
[2025-12-18 07:03:47] 2025-12-18 12:03:42,652 | INFO     | all workflow threads have been joined
[2025-12-18 07:03:47] 2025-12-18 12:03:42,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 07:03:47] 2025-12-18 12:03:42,653 | INFO     | traces error code: 0
[2025-12-18 07:03:47] 2025-12-18 12:03:42,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 07:03:47] 2025-12-18 12:03:45,375 [wrapper] ==== pilot stdout END ====
[2025-12-18 07:03:47] 2025-12-18 12:03:45,379 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 07:03:47] 2025-12-18 12:03:45,423 [wrapper] pilotpid: 2695047
[2025-12-18 07:03:47] 2025-12-18 12:03:45,481 [wrapper] Pilot exit status: 0
[2025-12-18 07:03:47] 2025-12-18 12:03:45,781 [wrapper] pandaids: 6932561292
[2025-12-18 07:03:47] 2025-12-18 12:03:46,026 [wrapper] cleanup supervisor_pilot    5647 2695048
[2025-12-18 07:03:47] 2025-12-18 12:03:46,034 [wrapper] Test setup, not cleaning
[2025-12-18 07:03:47] 2025-12-18 12:03:46,071 [wrapper] apfmon messages muted
[2025-12-18 07:03:47] 2025-12-18 12:03:46,101 [wrapper] ==== wrapper stdout END ====
[2025-12-18 07:03:47] 2025-12-18 12:03:46,138 [wrapper] ==== wrapper stderr END ====
[2025-12-18 07:03:48]  *** Error codes and diagnostics ***
[2025-12-18 07:03:48]     "exeErrorCode": 0,
[2025-12-18 07:03:48]     "exeErrorDiag": "",
[2025-12-18 07:03:48]     "pilotErrorCode": 0,
[2025-12-18 07:03:48]     "pilotErrorDiag": "",
[2025-12-18 07:03:48]  *** Listing of results directory ***
[2025-12-18 07:03:48] total 356304
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 14:55 pilot3.tar.gz
[2025-12-18 07:03:48] -rwx------. 1 boincer umatlas     36322 Dec 17 14:58 runpilot2-wrapper.sh
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 14:59 queuedata.json
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas       100 Dec 18 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 07:03:48] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 18 00:01 run_atlas
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas       105 Dec 18 00:01 job.xml
[2025-12-18 07:03:48] -rw-r--r--. 2 boincer umatlas 194193472 Dec 18 00:01 EVNT.47886929._000471.pool.root.1
[2025-12-18 07:03:48] -rw-r--r--. 2 boincer umatlas     15847 Dec 18 00:01 start_atlas.sh
[2025-12-18 07:03:48] drwxrwx--x. 2 boincer umatlas      4096 Dec 18 00:01 shared
[2025-12-18 07:03:48] -rw-r--r--. 2 boincer umatlas    592400 Dec 18 00:01 input.tar.gz
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas         0 Dec 18 00:01 boinc_lockfile
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas      2515 Dec 18 00:01 pandaJob.out
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas        57 Dec 18 00:01 setup.sh.local
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas    988110 Dec 18 00:02 agis_schedconf.cvmfs.json
[2025-12-18 07:03:48] drwx------. 5 boincer umatlas      4096 Dec 18 00:02 pilot3
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas 159814257 Dec 18 06:55 HITS.47886933._010708.pool.root.1
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas       530 Dec 18 06:55 boinc_task_state.xml
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas      6844 Dec 18 07:00 init_data.xml
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas      1041 Dec 18 07:01 memory_monitor_summary.json
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas   1516240 Dec 18 07:01 agis_ddmendpoints.agis.ALL.json
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas    627700 Dec 18 07:01 log.47886933._010708.job.log.tgz.1
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas        95 Dec 18 07:02 pilot_heartbeat.json
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas      7827 Dec 18 07:02 heartbeat.json
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas      5010 Dec 18 07:03 pilotlog.txt
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas      8192 Dec 18 07:03 boinc_mmap_file
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas        28 Dec 18 07:03 wrapper_checkpoint.txt
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas   2839289 Dec 18 07:03 log.47886933._010708.job.log.1
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas       357 Dec 18 07:03 output.list
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas       620 Dec 18 07:03 runtime_log
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas   3481600 Dec 18 07:03 result.tar.gz
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas      9350 Dec 18 07:03 runtime_log.err
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas       658 Dec 18 07:03 NZELDmQqCq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmr4XKDmS4gQWm.diag
[2025-12-18 07:03:48] -rw-r--r--. 1 boincer umatlas     21049 Dec 18 07:03 stderr.txt
[2025-12-18 07:03:48] HITS file was successfully produced:
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas 159814257 Dec 18 06:55 shared/HITS.pool.root.1
[2025-12-18 07:03:48]  *** Contents of shared directory: ***
[2025-12-18 07:03:48] total 349716
[2025-12-18 07:03:48] -rw-r--r--. 2 boincer umatlas 194193472 Dec 18 00:01 ATLAS.root_0
[2025-12-18 07:03:48] -rw-r--r--. 2 boincer umatlas     15847 Dec 18 00:01 start_atlas.sh
[2025-12-18 07:03:48] -rw-r--r--. 2 boincer umatlas    592400 Dec 18 00:01 input.tar.gz
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas 159814257 Dec 18 06:55 HITS.pool.root.1
[2025-12-18 07:03:48] -rw-------. 1 boincer umatlas   3481600 Dec 18 07:03 result.tar.gz
07:03:50 (2690852): run_atlas exited; CPU time 46948.806932
07:03:50 (2690852): called boinc_finish(0)

</stderr_txt>
]]>

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