Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:06:50 (224669): wrapper (7.7.26015): starting
17:06:50 (224669): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 17:06:50] Arguments: --nthreads 12
[2025-12-17 17:06:50] Threads: 12
[2025-12-17 17:06:50] Checking for CVMFS
[2025-12-17 17:06:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 17:06:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 17:06:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 17:06:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 17:06:51] 2.11.5.0 4065894 24175 355484 154128 1 386 41083894 45568000 10249 130560 0 166776563 99.762 118279628 23437 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-17 17:06:51] CVMFS is ok
[2025-12-17 17:06:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 17:06:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 17:06:51] Further information can be found at the LHC@home message board.
[2025-12-17 17:06:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 17:06:51] Checking for apptainer binary...
[2025-12-17 17:06:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 17:06:51] Running /usr/bin/apptainer --version
[2025-12-17 17:06:51] apptainer version 1.4.1-1.el9
[2025-12-17 17:06:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 17:06:51] wns0085.triumf.lcg
[2025-12-17 17:06:51] apptainer works
[2025-12-17 17:06:51] Set ATHENA_PROC_NUMBER=12
[2025-12-17 17:06:51] Set ATHENA_CORE_NUMBER=12
[2025-12-17 17:06:51] Starting ATLAS job with PandaID=6932561738
[2025-12-17 17:06:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 17:11:14]  *** The last 200 lines of the pilot log: ***
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | wrong length of table data, x=[1766020084.0], y=[1131.0] (must be same and length>=4)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | could have reported an average CPU frequency of 2639 MHz (4 samples)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | ..............................
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . Timing measurements:
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . get job = 0 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . initial setup = 4 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . payload setup = 14 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . stage-in = 0 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . payload execution = 23 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . stage-out = 1 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . log creation = 0 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | ..............................
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932561738/pilotlog.txt
[2025-12-17 17:11:14] 2025-12-18 01:10:40,248 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-17 17:11:14] - Log from pilotlog.txt -
[2025-12-17 17:11:14] 2025-12-18 01:10:40,193 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6932561738/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | INFO     | extracted standard info from prmon json
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | wrong length of table data, x=[1766020084.0], y=[1131.0] (must be same and length>=4)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | could have reported an average CPU frequency of 2639 MHz (4 samples)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | ..............................
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . Timing measurements:
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . get job = 0 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . initial setup = 4 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . payload setup = 14 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . stage-in = 0 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . payload execution = 23 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . stage-out = 1 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . log creation = 0 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | ..............................
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932561738/pilotlog.txt
[2025-12-17 17:11:14] 2025-12-18 01:10:40,248 | WARNING  | 
[2025-12-17 17:11:14] [begin log extracts]
[2025-12-17 17:11:14] - Log from pilotlog.txt -
[2025-12-17 17:11:14] 2025-12-18 01:10:40,193 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6932561738/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | INFO     | extracted standard info from prmon json
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 17:11:14] 2025-12-18 01:10:40,194 | WARNING  | wrong length of table data, x=[1766020084.0], y=[1131.0] (must be same and length>=4)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | could have reported an average CPU frequency of 2639 MHz (4 samples)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | ..............................
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . Timing measurements:
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . get job = 0 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . initial setup = 4 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . payload setup = 14 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . stage-in = 0 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . payload execution = 23 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . stage-out = 1 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | . log creation = 0 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | ..............................
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 17:11:14] 2025-12-18 01:10:40,195 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932561738/pilotlog.txt
[2025-12-17 17:11:14] [end log extracts]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,249 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,249 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-17 17:11:14] 2025-12-18 01:10:40,304 | INFO     | 
[2025-12-17 17:11:14] 2025-12-18 01:10:40,304 | INFO     | job summary report
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | --------------------------------------------------
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | PanDA job id: 6932561738
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | task id: 47898782
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-17 17:08:12,950 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | pilot state: failed 
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | transexitcode: 65
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | exeerrorcode: 65
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | exitcode: 65
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | cpuconsumptiontime: 15 s
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | nevents: 0
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | neventsw: 0
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | pid: 234902
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | pgrp: 234902
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | corecount: 12
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | event service: False
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | sizes: {0: 2283750, 1: 2283834, 2: 2284005, 12: 2284033, 15: 2284323, 23: 2284351, 43: 2307817, 44: 2307793, 46: 2312113, 49: 2312141, 178: 2312307}
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | --------------------------------------------------
[2025-12-17 17:11:14] 2025-12-18 01:10:40,305 | INFO     | 
[2025-12-17 17:11:14] 2025-12-18 01:10:40,306 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | job 6932561738 has completed (purged errors)
[2025-12-17 17:11:14] 2025-12-18 01:10:40,320 | INFO     | overall cleanup function is called
[2025-12-17 17:11:14] 2025-12-18 01:10:41,326 | INFO     | --- collectZombieJob: --- 10, [234902]
[2025-12-17 17:11:14] 2025-12-18 01:10:41,326 | INFO     | zombie collector waiting for pid 234902
[2025-12-17 17:11:14] 2025-12-18 01:10:41,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 17:11:14] 2025-12-18 01:10:41,327 | INFO     | collected zombie processes
[2025-12-17 17:11:14] 2025-12-18 01:10:41,327 | INFO     | will attempt to kill all subprocesses of pid=234902
[2025-12-17 17:11:14] 2025-12-18 01:10:42,168 | INFO     | process IDs to be killed: [234902] (in reverse order)
[2025-12-17 17:11:14] 2025-12-18 01:10:42,478 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 17:11:14] 2025-12-18 01:10:42,478 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 17:11:14] 2025-12-18 01:10:42,484 | INFO     | did not find any defunct processes belonging to 234902
[2025-12-17 17:11:14] 2025-12-18 01:10:42,490 | INFO     | did not find any defunct processes belonging to 234902
[2025-12-17 17:11:14] 2025-12-18 01:10:42,491 | INFO     | ready for new job
[2025-12-17 17:11:14] 2025-12-18 01:10:42,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 17:11:14] 2025-12-18 01:10:42,493 | INFO     | ***************************************
[2025-12-17 17:11:14] 2025-12-18 01:10:42,493 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 17:11:14] 2025-12-18 01:10:42,493 | INFO     | ***************************************
[2025-12-17 17:11:14] 2025-12-18 01:10:42,493 | INFO     | 
[2025-12-17 17:11:14] 2025-12-18 01:10:42,495 | INFO     | architecture information:
[2025-12-17 17:11:14] 2025-12-18 01:10:42,495 | INFO     | executing command: cat /etc/os-release
[2025-12-17 17:11:14] 2025-12-18 01:10:42,510 | INFO     | cat /etc/os-release:
[2025-12-17 17:11:14] NAME="CentOS Linux"
[2025-12-17 17:11:14] VERSION="7 (Core)"
[2025-12-17 17:11:14] ID="centos"
[2025-12-17 17:11:14] ID_LIKE="rhel fedora"
[2025-12-17 17:11:14] VERSION_ID="7"
[2025-12-17 17:11:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 17:11:14] ANSI_COLOR="0;31"
[2025-12-17 17:11:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 17:11:14] HOME_URL="https://www.centos.org/"
[2025-12-17 17:11:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 17:11:14] 
[2025-12-17 17:11:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 17:11:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 17:11:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 17:11:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 17:11:14] 
[2025-12-17 17:11:14] 2025-12-18 01:10:42,511 | INFO     | ***************************************
[2025-12-17 17:11:14] 2025-12-18 01:10:43,015 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-17 17:11:14] 2025-12-18 01:10:43,105 | INFO     | sufficient remaining disk space (2126591819776 B)
[2025-12-17 17:11:14] 2025-12-18 01:10:43,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 17:11:14] 2025-12-18 01:10:43,105 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 17:11:14] 2025-12-18 01:10:43,105 | INFO     | update_server=False
[2025-12-17 17:11:14] 2025-12-18 01:10:43,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 17:11:14] 2025-12-18 01:10:43,106 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 17:11:14] 2025-12-18 01:10:43,107 | INFO     | aborting loop
[2025-12-17 17:11:14] 2025-12-18 01:10:43,846 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 17:11:14] 2025-12-18 01:10:43,916 | INFO     | all data control threads have been joined
[2025-12-17 17:11:14] 2025-12-18 01:10:44,111 | INFO     | [job] retrieve thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:44,112 | INFO     | [job] job monitor thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:44,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 17:11:14] 2025-12-18 01:10:44,312 | INFO     | all payload control threads have been joined
[2025-12-17 17:11:14] 2025-12-18 01:10:44,317 | INFO     | all job control threads have been joined
[2025-12-17 17:11:14] 2025-12-18 01:10:44,375 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:44,448 | INFO     | [payload] validate_post thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:44,749 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:44,752 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:44,787 | INFO     | [data] copytool_in thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:44,931 | INFO     | [data] control thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:45,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:45,318 | INFO     | [payload] control thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:45,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 17:11:14] 2025-12-18 01:10:45,323 | INFO     | [job] control thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:45,370 | INFO     | [payload] failed_post thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:45,413 | INFO     | [job] validate thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:46,317 | INFO     | [data] copytool_out thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:46,328 | INFO     | [job] queue monitor thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:10:47,855 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 17:11:14] 2025-12-18 01:11:07,691 | INFO     | [monitor] cgroup control has ended
[2025-12-17 17:11:14] 2025-12-18 01:11:08,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811355711296)>', '<ExcThread(monitor, started 139810354218752)>']
[2025-12-17 17:11:14] 2025-12-18 01:11:12,495 | INFO     | PID=228325 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 17:11:14] 2025-12-18 01:11:12,495 | INFO     | .. there are 14 such processes running
[2025-12-17 17:11:14] 2025-12-18 01:11:12,496 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 17:11:14] 2025-12-18 01:11:12,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 17:11:14] 2025-12-18 01:11:12,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 17:11:14] 2025-12-18 01:11:12,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 17:11:14] 2025-12-18 01:11:12,496 | INFO     | [monitor] control thread has ended
[2025-12-17 17:11:14] 2025-12-18 01:11:13,322 | INFO     | all workflow threads have been joined
[2025-12-17 17:11:14] 2025-12-18 01:11:13,322 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 17:11:14] 2025-12-18 01:11:13,323 | INFO     | traces error code: 0
[2025-12-17 17:11:14] 2025-12-18 01:11:13,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 17:11:14] 2025-12-18 01:11:13,783 [wrapper] ==== pilot stdout END ====
[2025-12-17 17:11:14] 2025-12-18 01:11:13,818 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 17:11:14] 2025-12-18 01:11:13,852 [wrapper] pilotpid: 228325
[2025-12-17 17:11:14] 2025-12-18 01:11:13,888 [wrapper] Pilot exit status: 0
[2025-12-17 17:11:14] 2025-12-18 01:11:14,095 [wrapper] pandaids: 6932561738
[2025-12-17 17:11:14] 2025-12-18 01:11:14,318 [wrapper] cleanup supervisor_pilot  228331 228326
[2025-12-17 17:11:14] 2025-12-18 01:11:14,320 [wrapper] Test setup, not cleaning
[2025-12-17 17:11:14] 2025-12-18 01:11:14,322 [wrapper] apfmon messages muted
[2025-12-17 17:11:14] 2025-12-18 01:11:14,324 [wrapper] ==== wrapper stdout END ====
[2025-12-17 17:11:14] 2025-12-18 01:11:14,325 [wrapper] ==== wrapper stderr END ====
[2025-12-17 17:11:14]  *** Error codes and diagnostics ***
[2025-12-17 17:11:14]     "exeErrorCode": 65,
[2025-12-17 17:11:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-17 17:11:14]     "pilotErrorCode": 1305,
[2025-12-17 17:11:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-17 17:11:14]  *** Listing of results directory ***
[2025-12-17 17:11:14] total 214044
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc      5112 Dec 17 11:55 queuedata.json
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc    579449 Dec 17 11:55 pilot3.tar.gz
[2025-12-17 17:11:14] -rwx------. 1 boinc boinc     36322 Dec 17 11:56 runpilot2-wrapper.sh
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc       100 Dec 17 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 17:11:14] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 17:06 run_atlas
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc       105 Dec 17 17:06 job.xml
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc      6596 Dec 17 17:06 init_data.xml
[2025-12-17 17:11:14] -rw-r--r--. 2 boinc boinc 215043674 Dec 17 17:06 EVNT.47898779._000239.pool.root.1
[2025-12-17 17:11:14] -rw-r--r--. 2 boinc boinc     15847 Dec 17 17:06 start_atlas.sh
[2025-12-17 17:11:14] drwxrwx--x. 2 boinc boinc      4096 Dec 17 17:06 shared
[2025-12-17 17:11:14] -rw-r--r--. 2 boinc boinc    592394 Dec 17 17:06 input.tar.gz
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc         0 Dec 17 17:06 boinc_lockfile
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc      2522 Dec 17 17:06 pandaJob.out
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc    988134 Dec 17 17:07 agis_schedconf.cvmfs.json
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc   1516240 Dec 17 17:07 agis_ddmendpoints.agis.ALL.json
[2025-12-17 17:11:14] drwx------. 5 boinc boinc      4096 Dec 17 17:07 pilot3
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc       522 Dec 17 17:08 boinc_task_state.xml
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc       954 Dec 17 17:08 memory_monitor_summary.json
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc     21283 Dec 17 17:08 log.47898782._005930.job.log.tgz.1
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc      8389 Dec 17 17:10 heartbeat.json
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc        95 Dec 17 17:11 pilot_heartbeat.json
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc      4822 Dec 17 17:11 pilotlog.txt
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc      8192 Dec 17 17:11 boinc_mmap_file
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc        22 Dec 17 17:11 wrapper_checkpoint.txt
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc     89142 Dec 17 17:11 log.47898782._005930.job.log.1
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc       188 Dec 17 17:11 output.list
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc       620 Dec 17 17:11 runtime_log
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc    133120 Dec 17 17:11 result.tar.gz
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc      8636 Dec 17 17:11 runtime_log.err
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc       644 Dec 17 17:11 bjvNDmkoCq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtfcKDmEi34in.diag
[2025-12-17 17:11:14] -rw-r--r--. 1 boinc boinc     21819 Dec 17 17:11 stderr.txt
[2025-12-17 17:11:14] No HITS result produced
[2025-12-17 17:11:14]  *** Contents of shared directory: ***
[2025-12-17 17:11:14] total 210736
[2025-12-17 17:11:14] -rw-r--r--. 2 boinc boinc 215043674 Dec 17 17:06 ATLAS.root_0
[2025-12-17 17:11:14] -rw-r--r--. 2 boinc boinc     15847 Dec 17 17:06 start_atlas.sh
[2025-12-17 17:11:14] -rw-r--r--. 2 boinc boinc    592394 Dec 17 17:06 input.tar.gz
[2025-12-17 17:11:14] -rw-------. 1 boinc boinc    133120 Dec 17 17:11 result.tar.gz
17:11:16 (224669): run_atlas exited; CPU time 22.408896
17:11:16 (224669): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN