Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:11:45 (31024): wrapper (7.7.26015): starting
07:11:45 (31024): wrapper: running run_atlas (--nthreads 8)
[2025-12-18 07:11:45] Arguments: --nthreads 8
[2025-12-18 07:11:45] Threads: 8
[2025-12-18 07:11:45] Checking for CVMFS
[2025-12-18 07:11:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 07:11:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 07:11:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 07:11:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 07:11:47] 2.11.2.0 6904 3359 67264 154136 3 245 14215886 25165824 4430 130560 0 2486741 99.971 623852 2293 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-18 07:11:47] CVMFS is ok
[2025-12-18 07:11:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 07:11:47] Checking for apptainer binary...
[2025-12-18 07:11:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 07:11:47] Running /usr/bin/apptainer --version
[2025-12-18 07:11:47] apptainer version 1.3.2-1.el7
[2025-12-18 07:11:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 07:12:03] cg-vwn474.simple-grid.lan
[2025-12-18 07:12:03] apptainer works
[2025-12-18 07:12:03] Set ATHENA_PROC_NUMBER=8
[2025-12-18 07:12:03] Set ATHENA_CORE_NUMBER=8
[2025-12-18 07:12:03] Starting ATLAS job with PandaID=6932417630
[2025-12-18 07:12:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 12:36:05]  *** The last 200 lines of the pilot log: ***
[2025-12-18 12:36:05] 2025-12-18 11:35:29,262 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6932417630/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 12:36:05] 2025-12-18 11:35:29,263 | INFO     | extracted standard info from prmon json
[2025-12-18 12:36:05] 2025-12-18 11:35:29,263 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 12:36:05] 2025-12-18 11:35:29,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 12:36:05] 2025-12-18 11:35:29,263 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 12:36:05] 2025-12-18 11:35:29,263 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 12:36:05] 2025-12-18 11:35:29,269 | INFO     | fitting pss+swap vs Time
[2025-12-18 12:36:05] 2025-12-18 11:35:29,270 | INFO     | sum of square deviations: 9059954057.0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,273 | INFO     | sum of deviations: 60228601655.5
[2025-12-18 12:36:05] 2025-12-18 11:35:29,273 | INFO     | mean x: 1766048310.5
[2025-12-18 12:36:05] 2025-12-18 11:35:29,273 | INFO     | mean y: 2494781.2175324676
[2025-12-18 12:36:05] 2025-12-18 11:35:29,273 | INFO     | intersect: -11737809808.438873
[2025-12-18 12:36:05] 2025-12-18 11:35:29,274 | INFO     | chi2: 4.617924590439104
[2025-12-18 12:36:05] 2025-12-18 11:35:29,274 | INFO     | sum of square deviations: 8625843592.0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,277 | INFO     | sum of deviations: 59111082722.99991
[2025-12-18 12:36:05] 2025-12-18 11:35:29,277 | INFO     | mean x: 1766048158.0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,277 | INFO     | mean y: 2494388.610561056
[2025-12-18 12:36:05] 2025-12-18 11:35:29,277 | INFO     | intersect: -12099860314.082918
[2025-12-18 12:36:05] 2025-12-18 11:35:29,278 | INFO     | chi2: 4.621127637723454
[2025-12-18 12:36:05] 2025-12-18 11:35:29,278 | INFO     | current chi2=4.621127637723454 (change=-0.0693611864295356 %)
[2025-12-18 12:36:05] 2025-12-18 11:35:29,278 | INFO     | right removable region: 302
[2025-12-18 12:36:05] 2025-12-18 11:35:29,279 | INFO     | sum of square deviations: 8625843592.0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,281 | INFO     | sum of deviations: -39278874353.00001
[2025-12-18 12:36:05] 2025-12-18 11:35:29,282 | INFO     | mean x: 1766048463.0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,282 | INFO     | mean y: 2529693.8217821782
[2025-12-18 12:36:05] 2025-12-18 11:35:29,282 | INFO     | intersect: 8044455673.539429
[2025-12-18 12:36:05] 2025-12-18 11:35:29,282 | INFO     | chi2: 0.6602648755599754
[2025-12-18 12:36:05] 2025-12-18 11:35:29,283 | INFO     | current chi2=0.6602648755599754 (change=85.70212954696186 %)
[2025-12-18 12:36:05] 2025-12-18 11:35:29,283 | INFO     | sum of square deviations: 8205826414.5
[2025-12-18 12:36:05] 2025-12-18 11:35:29,286 | INFO     | sum of deviations: -63061217206.00001
[2025-12-18 12:36:05] 2025-12-18 11:35:29,286 | INFO     | mean x: 1766048615.5
[2025-12-18 12:36:05] 2025-12-18 11:35:29,286 | INFO     | mean y: 2538263.0402684566
[2025-12-18 12:36:05] 2025-12-18 11:35:29,286 | INFO     | intersect: 13574501611.1325
[2025-12-18 12:36:05] 2025-12-18 11:35:29,287 | INFO     | chi2: 0.2405711830485278
[2025-12-18 12:36:05] 2025-12-18 11:35:29,287 | INFO     | current chi2=0.2405711830485278 (change=63.56444330852863 %)
[2025-12-18 12:36:05] 2025-12-18 11:35:29,287 | INFO     | sum of square deviations: 7799669962.0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,290 | INFO     | sum of deviations: -55332342440.99999
[2025-12-18 12:36:05] 2025-12-18 11:35:29,290 | INFO     | mean x: 1766048768.0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,290 | INFO     | mean y: 2535358.3890784984
[2025-12-18 12:36:05] 2025-12-18 11:35:29,290 | INFO     | intersect: 12531221273.892199
[2025-12-18 12:36:05] 2025-12-18 11:35:29,291 | INFO     | chi2: 0.23283104068611007
[2025-12-18 12:36:05] 2025-12-18 11:35:29,291 | INFO     | current chi2=0.23283104068611007 (change=3.217402127858505 %)
[2025-12-18 12:36:05] 2025-12-18 11:35:29,291 | INFO     | left removable region: 30
[2025-12-18 12:36:05] 2025-12-18 11:35:29,292 | INFO     | sum of square deviations: 6239923508.0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,294 | INFO     | sum of deviations: -26482520205.499992
[2025-12-18 12:36:05] 2025-12-18 11:35:29,294 | INFO     | mean x: 1766049042.5
[2025-12-18 12:36:05] 2025-12-18 11:35:29,294 | INFO     | mean y: 2523959.9595588236
[2025-12-18 12:36:05] 2025-12-18 11:35:29,294 | INFO     | intersect: 7497716712.234265
[2025-12-18 12:36:05] 2025-12-18 11:35:29,295 | INFO     | chi2: 0.16968814345305794
[2025-12-18 12:36:05] 2025-12-18 11:35:29,295 | INFO     | current memory leak: -4.24 B/s (using 272 data points, chi2=0.17)
[2025-12-18 12:36:05] 2025-12-18 11:35:29,295 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2025-12-18 12:36:05] 2025-12-18 11:35:29,296 | INFO     | ..............................
[2025-12-18 12:36:05] 2025-12-18 11:35:29,296 | INFO     | . Timing measurements:
[2025-12-18 12:36:05] 2025-12-18 11:35:29,296 | INFO     | . get job = 1 s
[2025-12-18 12:36:05] 2025-12-18 11:35:29,296 | INFO     | . initial setup = 7 s
[2025-12-18 12:36:05] 2025-12-18 11:35:29,296 | INFO     | . payload setup = 116 s
[2025-12-18 12:36:05] 2025-12-18 11:35:29,296 | INFO     | . stage-in = 0 s
[2025-12-18 12:36:05] 2025-12-18 11:35:29,296 | INFO     | . payload execution = 18915 s
[2025-12-18 12:36:05] 2025-12-18 11:35:29,296 | INFO     | . stage-out = 1 s
[2025-12-18 12:36:05] 2025-12-18 11:35:29,296 | INFO     | . log creation = 0 s
[2025-12-18 12:36:05] 2025-12-18 11:35:29,296 | INFO     | ..............................
[2025-12-18 12:36:05] 2025-12-18 11:35:29,404 | INFO     | 
[2025-12-18 12:36:05] 2025-12-18 11:35:29,404 | INFO     | job summary report
[2025-12-18 12:36:05] 2025-12-18 11:35:29,404 | INFO     | --------------------------------------------------
[2025-12-18 12:36:05] 2025-12-18 11:35:29,404 | INFO     | PanDA job id: 6932417630
[2025-12-18 12:36:05] 2025-12-18 11:35:29,404 | INFO     | task id: 47898836
[2025-12-18 12:36:05] 2025-12-18 11:35:29,404 | INFO     | errors: (none)
[2025-12-18 12:36:05] 2025-12-18 11:35:29,404 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 12:36:05] 2025-12-18 11:35:29,404 | INFO     | pilot state: finished 
[2025-12-18 12:36:05] 2025-12-18 11:35:29,405 | INFO     | transexitcode: 0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,405 | INFO     | exeerrorcode: 0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,405 | INFO     | exeerrordiag: 
[2025-12-18 12:36:05] 2025-12-18 11:35:29,405 | INFO     | exitcode: 0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,405 | INFO     | exitmsg: OK
[2025-12-18 12:36:05] 2025-12-18 11:35:29,405 | INFO     | cpuconsumptiontime: 69635 s
[2025-12-18 12:36:05] 2025-12-18 11:35:29,405 | INFO     | nevents: 400
[2025-12-18 12:36:05] 2025-12-18 11:35:29,406 | INFO     | neventsw: 0
[2025-12-18 12:36:05] 2025-12-18 11:35:29,406 | INFO     | pid: 9027
[2025-12-18 12:36:05] 2025-12-18 11:35:29,406 | INFO     | pgrp: 9027
[2025-12-18 12:36:05] 2025-12-18 11:35:29,406 | INFO     | corecount: 8
[2025-12-18 12:36:05] 2025-12-18 11:35:29,406 | INFO     | event service: False
[2025-12-18 12:36:05] 2025-12-18 11:35:29,406 | INFO     | sizes: {0: 2283183, 1: 2284039, 2: 2284039, 13: 2284067, 23: 2284123, 34: 2284151, 45: 2284307, 55: 2284335, 66: 2284363, 77: 2284391, 80: 2284709, 88: 2285017, 19
[2025-12-18 12:36:05] 2025-12-18 11:35:29,406 | INFO     | --------------------------------------------------
[2025-12-18 12:36:05] 2025-12-18 11:35:29,406 | INFO     | 
[2025-12-18 12:36:05] 2025-12-18 11:35:29,406 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-18 12:36:05] 2025-12-18 11:35:29,429 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,429 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,429 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,429 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,431 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 12:36:05] 2025-12-18 11:35:29,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,431 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 12:36:05] 2025-12-18 11:35:29,431 | INFO     | job 6932417630 has completed (purged errors)
[2025-12-18 12:36:05] 2025-12-18 11:35:29,431 | INFO     | overall cleanup function is called
[2025-12-18 12:36:05] 2025-12-18 11:35:30,439 | INFO     | --- collectZombieJob: --- 10, [9027]
[2025-12-18 12:36:05] 2025-12-18 11:35:30,440 | INFO     | zombie collector waiting for pid 9027
[2025-12-18 12:36:05] 2025-12-18 11:35:30,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 12:36:05] 2025-12-18 11:35:30,440 | INFO     | collected zombie processes
[2025-12-18 12:36:05] 2025-12-18 11:35:30,440 | INFO     | will attempt to kill all subprocesses of pid=9027
[2025-12-18 12:36:05] 2025-12-18 11:35:30,550 | INFO     | process IDs to be killed: [9027] (in reverse order)
[2025-12-18 12:36:05] 2025-12-18 11:35:30,622 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 12:36:05] 2025-12-18 11:35:30,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 12:36:05] 2025-12-18 11:35:30,626 | INFO     | did not find any defunct processes belonging to 9027
[2025-12-18 12:36:05] 2025-12-18 11:35:30,629 | INFO     | did not find any defunct processes belonging to 9027
[2025-12-18 12:36:05] 2025-12-18 11:35:30,629 | INFO     | ready for new job
[2025-12-18 12:36:05] 2025-12-18 11:35:30,629 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 12:36:05] 2025-12-18 11:35:30,631 | INFO     | ***************************************
[2025-12-18 12:36:05] 2025-12-18 11:35:30,632 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 12:36:05] 2025-12-18 11:35:30,632 | INFO     | ***************************************
[2025-12-18 12:36:05] 2025-12-18 11:35:30,632 | INFO     | 
[2025-12-18 12:36:05] 2025-12-18 11:35:30,632 | INFO     | pilot is running in a VM
[2025-12-18 12:36:05] 2025-12-18 11:35:30,633 | INFO     | architecture information:
[2025-12-18 12:36:05] 2025-12-18 11:35:30,633 | INFO     | executing command: cat /etc/os-release
[2025-12-18 12:36:05] 2025-12-18 11:35:30,658 | INFO     | cat /etc/os-release:
[2025-12-18 12:36:05] NAME="CentOS Linux"
[2025-12-18 12:36:05] VERSION="7 (Core)"
[2025-12-18 12:36:05] ID="centos"
[2025-12-18 12:36:05] ID_LIKE="rhel fedora"
[2025-12-18 12:36:05] VERSION_ID="7"
[2025-12-18 12:36:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 12:36:05] ANSI_COLOR="0;31"
[2025-12-18 12:36:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 12:36:05] HOME_URL="https://www.centos.org/"
[2025-12-18 12:36:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 12:36:05] 
[2025-12-18 12:36:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 12:36:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 12:36:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 12:36:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 12:36:05] 
[2025-12-18 12:36:05] 2025-12-18 11:35:30,658 | INFO     | ***************************************
[2025-12-18 12:36:05] 2025-12-18 11:35:31,161 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-18 12:36:05] 2025-12-18 11:35:31,198 | INFO     | sufficient remaining disk space (496492347392 B)
[2025-12-18 12:36:05] 2025-12-18 11:35:31,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 12:36:05] 2025-12-18 11:35:31,198 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 12:36:05] 2025-12-18 11:35:31,198 | INFO     | update_server=False
[2025-12-18 12:36:05] 2025-12-18 11:35:31,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 12:36:05] 2025-12-18 11:35:31,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 12:36:05] 2025-12-18 11:35:31,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 12:36:05] 2025-12-18 11:35:31,374 | INFO     | all payload control threads have been joined
[2025-12-18 12:36:05] 2025-12-18 11:35:31,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 12:36:05] 2025-12-18 11:35:31,533 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-18 12:36:05] 2025-12-18 11:35:31,533 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-18 12:36:05] 2025-12-18 11:35:31,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 12:36:05] 2025-12-18 11:35:31,533 | INFO     | will abort loop
[2025-12-18 12:36:05] 2025-12-18 11:35:31,572 | INFO     | all data control threads have been joined
[2025-12-18 12:36:05] 2025-12-18 11:35:31,589 | INFO     | all job control threads have been joined
[2025-12-18 12:36:05] 2025-12-18 11:35:32,204 | INFO     | [job] queue monitor thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:32,205 | INFO     | [job] retrieve thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:32,369 | INFO     | [job] validate thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:32,380 | INFO     | [payload] control thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:32,508 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:32,539 | INFO     | [job] job monitor thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:32,578 | INFO     | [data] control thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:32,580 | INFO     | [payload] failed_post thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:32,594 | INFO     | [job] control thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:33,069 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:33,193 | INFO     | [payload] validate_post thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:33,255 | INFO     | [data] copytool_out thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:33,548 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:33,688 | INFO     | [data] copytool_in thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:35,394 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:42,198 | INFO     | job.realtimelogging is not enabled
[2025-12-18 12:36:05] 2025-12-18 11:35:43,204 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 12:36:05] 2025-12-18 11:35:43,555 | INFO     | [monitor] cgroup control has ended
[2025-12-18 12:36:05] 2025-12-18 11:35:44,242 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815315654464)>', '<ExcThread(monitor, started 139814741473024)>']
[2025-12-18 12:36:05] 2025-12-18 11:35:49,268 | INFO     | all workflow threads have been joined
[2025-12-18 12:36:05] 2025-12-18 11:35:49,268 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 12:36:05] 2025-12-18 11:35:49,269 | INFO     | traces error code: 0
[2025-12-18 12:36:05] 2025-12-18 11:35:49,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 12:36:05] 2025-12-18 11:36:01,213 | INFO     | PID=2401 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-18 12:36:05] 2025-12-18 11:36:01,214 | INFO     | .. there are 9 such processes running
[2025-12-18 12:36:05] 2025-12-18 11:36:01,215 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 12:36:05] 2025-12-18 11:36:01,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 12:36:05] 2025-12-18 11:36:01,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 12:36:05] 2025-12-18 11:36:01,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 12:36:05] 2025-12-18 11:36:01,216 | INFO     | [monitor] control thread has ended
[2025-12-18 12:36:05] 2025-12-18 11:36:01,436 [wrapper] ==== pilot stdout END ====
[2025-12-18 12:36:05] 2025-12-18 11:36:01,511 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 12:36:05] 2025-12-18 11:36:01,622 [wrapper] pilotpid: 2401
[2025-12-18 12:36:05] 2025-12-18 11:36:01,736 [wrapper] Pilot exit status: 0
[2025-12-18 12:36:05] 2025-12-18 11:36:02,119 [wrapper] pandaids: 6932417630
[2025-12-18 12:36:05] 2025-12-18 11:36:02,859 [wrapper] cleanup supervisor_pilot 25191 2402
[2025-12-18 12:36:05] 2025-12-18 11:36:02,904 [wrapper] Test setup, not cleaning
[2025-12-18 12:36:05] 2025-12-18 11:36:03,001 [wrapper] apfmon messages muted
[2025-12-18 12:36:05] 2025-12-18 11:36:03,060 [wrapper] ==== wrapper stdout END ====
[2025-12-18 12:36:05] 2025-12-18 11:36:03,132 [wrapper] ==== wrapper stderr END ====
[2025-12-18 12:36:05]  *** Error codes and diagnostics ***
[2025-12-18 12:36:05]     "exeErrorCode": 0,
[2025-12-18 12:36:05]     "exeErrorDiag": "",
[2025-12-18 12:36:05]     "pilotErrorCode": 0,
[2025-12-18 12:36:05]     "pilotErrorDiag": "",
[2025-12-18 12:36:05]  *** Listing of results directory ***
[2025-12-18 12:36:05] total 407796
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc    579449 Dec 17 12:17 pilot3.tar.gz
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc      5112 Dec 17 12:19 queuedata.json
[2025-12-18 12:36:05] -rwx------. 1 boinc boinc     36322 Dec 17 12:20 runpilot2-wrapper.sh
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc       100 Dec 18 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 12:36:05] -rwxr-xr-x. 1 boinc boinc      7986 Dec 18 07:11 run_atlas
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc       105 Dec 18 07:11 job.xml
[2025-12-18 12:36:05] -rw-r--r--. 2 boinc boinc 213264046 Dec 18 07:11 EVNT.47898833._000152.pool.root.1
[2025-12-18 12:36:05] -rw-r--r--. 2 boinc boinc     15847 Dec 18 07:11 start_atlas.sh
[2025-12-18 12:36:05] drwxrwx--x. 2 boinc boinc        68 Dec 18 07:11 shared
[2025-12-18 12:36:05] -rw-r--r--. 2 boinc boinc    592404 Dec 18 07:11 input.tar.gz
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc      6392 Dec 18 07:11 init_data.xml
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc         0 Dec 18 07:11 boinc_lockfile
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc      2553 Dec 18 07:12 pandaJob.out
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc    988102 Dec 18 07:15 agis_schedconf.cvmfs.json
[2025-12-18 12:36:05] drwx------. 5 boinc boinc      4096 Dec 18 07:15 pilot3
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc 194236016 Dec 18 12:34 HITS.47898836._003934.pool.root.1
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc       531 Dec 18 12:34 boinc_task_state.xml
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc      1018 Dec 18 12:35 memory_monitor_summary.json
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc   1516240 Dec 18 12:35 agis_ddmendpoints.agis.ALL.json
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc    533101 Dec 18 12:35 log.47898836._003934.job.log.tgz.1
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc      7778 Dec 18 12:35 heartbeat.json
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc      8192 Dec 18 12:35 boinc_mmap_file
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc        28 Dec 18 12:35 wrapper_checkpoint.txt
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc        95 Dec 18 12:36 pilot_heartbeat.json
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc       819 Dec 18 12:36 pilotlog.txt
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc   2562979 Dec 18 12:36 log.47898836._003934.job.log.1
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc       357 Dec 18 12:36 output.list
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc       620 Dec 18 12:36 runtime_log
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc   3112960 Dec 18 12:36 result.tar.gz
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc       657 Dec 18 12:36 zC5LDmSl4p8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFVXKDmwOrZNn.diag
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc      8817 Dec 18 12:36 runtime_log.err
[2025-12-18 12:36:05] -rw-r--r--. 1 boinc boinc     20752 Dec 18 12:36 stderr.txt
[2025-12-18 12:36:05] HITS file was successfully produced:
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc 194236016 Dec 18 12:34 shared/HITS.pool.root.1
[2025-12-18 12:36:05]  *** Contents of shared directory: ***
[2025-12-18 12:36:05] total 401588
[2025-12-18 12:36:05] -rw-r--r--. 2 boinc boinc 213264046 Dec 18 07:11 ATLAS.root_0
[2025-12-18 12:36:05] -rw-r--r--. 2 boinc boinc     15847 Dec 18 07:11 start_atlas.sh
[2025-12-18 12:36:05] -rw-r--r--. 2 boinc boinc    592404 Dec 18 07:11 input.tar.gz
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc 194236016 Dec 18 12:34 HITS.pool.root.1
[2025-12-18 12:36:05] -rw-------. 1 boinc boinc   3112960 Dec 18 12:36 result.tar.gz
12:36:06 (31024): run_atlas exited; CPU time 69884.974747
12:36:06 (31024): called boinc_finish(0)

</stderr_txt>
]]>

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