Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:17:04 (1167099): wrapper (7.7.26015): starting
16:17:04 (1167099): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 16:17:04] Arguments: --nthreads 4
[2025-12-18 16:17:04] Threads: 4
[2025-12-18 16:17:04] Checking for CVMFS
[2025-12-18 16:17:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 16:17:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 16:17:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 16:17:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 16:17:04] 2.9.2.0 3011181 7792 99928 154155 1 56 21362080 36864000 0 130560 0 6109771 99.991 283809 13296 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 16:17:04] CVMFS is ok
[2025-12-18 16:17:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 16:17:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 16:17:04] Further information can be found at the LHC@home message board.
[2025-12-18 16:17:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 16:17:04] Checking for apptainer binary...
[2025-12-18 16:17:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 16:17:04] Running /usr/bin/apptainer --version
[2025-12-18 16:17:04] apptainer version 1.4.1-1.1
[2025-12-18 16:17:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 16:17:04] atlasA139a
[2025-12-18 16:17:04] apptainer works
[2025-12-18 16:17:04] Set ATHENA_PROC_NUMBER=4
[2025-12-18 16:17:04] Set ATHENA_CORE_NUMBER=4
[2025-12-18 16:17:04] Starting ATLAS job with PandaID=6932172801
[2025-12-18 16:17:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 17:35:40]  *** The last 200 lines of the pilot log: ***
[2025-12-18 17:35:40] 2025-12-18 16:34:59,743 | INFO     | summary of transferred files:
[2025-12-18 17:35:40] 2025-12-18 16:34:59,743 | INFO     |  -- lfn=log.47886831._017196.job.log.tgz.1, status_code=0, status=transferred
[2025-12-18 17:35:40] 2025-12-18 16:34:59,743 | INFO     | stage-out finished correctly
[2025-12-18 17:35:40] 2025-12-18 16:35:00,028 | INFO     | PID=1170904 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 17:35:40] 2025-12-18 16:35:00,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-18 17:35:40] 2025-12-18 16:35:00,406 | WARNING  | process 1177474 can no longer be monitored (due to stat problems) - aborting
[2025-12-18 17:35:40] 2025-12-18 16:35:00,407 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6932172801/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 17:35:40] 2025-12-18 16:35:00,407 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6932172801/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 17:35:40] 2025-12-18 16:35:00,407 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-18 17:35:40] 2025-12-18 16:35:00,407 | WARNING  | maxPSS not found in memory monitor output
[2025-12-18 17:35:40] 2025-12-18 16:35:00,407 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2359450 B
[2025-12-18 17:35:40] 2025-12-18 16:35:00,408 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16082 B
[2025-12-18 17:35:40] 2025-12-18 16:35:00,408 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-18 17:35:40] 2025-12-18 16:35:00,425 | INFO     | sufficient remaining disk space (338226577408 B)
[2025-12-18 17:35:40] 2025-12-18 16:35:00,426 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-18 17:35:40] 2025-12-18 16:35:00,426 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6932172801: 2656289 B (within 2768240640 B limit)
[2025-12-18 17:35:40] 2025-12-18 16:35:00,426 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6932172801/HITS.47886831._017196.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-18 17:35:40] 2025-12-18 16:35:00,426 | INFO     | total size of present files: 0 B (workdir size: 2656289 B)
[2025-12-18 17:35:40] 2025-12-18 16:35:00,426 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6932172801/HITS.47886831._017196.pool.root.1 since it does not exist
[2025-12-18 17:35:40] 2025-12-18 16:35:00,468 | INFO     | number of running child processes to parent process 1177474: 1
[2025-12-18 17:35:40] 2025-12-18 16:35:00,468 | INFO     | maximum number of monitored processes: 6
[2025-12-18 17:35:40] 2025-12-18 16:35:01,029 | INFO     | time since job start (4668s) is within the limit (174528.0s)
[2025-12-18 17:35:40] 2025-12-18 16:35:01,693 | INFO     | job 6932172801 has state=finished
[2025-12-18 17:35:40] 2025-12-18 16:35:01,693 | INFO     | preparing for final server update for job 6932172801 in state='finished'
[2025-12-18 17:35:40] 2025-12-18 16:35:01,694 | INFO     | this job has now completed (state=finished)
[2025-12-18 17:35:40] 2025-12-18 16:35:01,694 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-18 17:35:40] 2025-12-18 16:35:01,694 | INFO     | log transfer has been attempted: DONE
[2025-12-18 17:35:40] 2025-12-18 16:35:01,694 | INFO     | job 6932172801 has finished - writing final server update
[2025-12-18 17:35:40] 2025-12-18 16:35:01,694 | INFO     | total number of processed events: 400 (read)
[2025-12-18 17:35:40] 2025-12-18 16:35:01,695 | INFO     | executing command: lscpu
[2025-12-18 17:35:40] 2025-12-18 16:35:01,717 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 17:35:40] 2025-12-18 16:35:02,972 | INFO     | monitor loop #359: job 0:6932172801 is in state 'finished'
[2025-12-18 17:35:40] 2025-12-18 16:35:02,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 17:35:40] 2025-12-18 16:35:03,034 | INFO     | time since job start (4670s) is within the limit (174528.0s)
[2025-12-18 17:35:40] 2025-12-18 16:35:05,040 | INFO     | time since job start (4672s) is within the limit (174528.0s)
[2025-12-18 17:35:40] 2025-12-18 16:35:05,474 | INFO     | monitor loop #360: job 0:6932172801 is in state 'finished'
[2025-12-18 17:35:40] 2025-12-18 16:35:05,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 17:35:40] 2025-12-18 16:35:07,046 | INFO     | time since job start (4674s) is within the limit (174528.0s)
[2025-12-18 17:35:40] 2025-12-18 16:35:07,502 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-18 17:35:40] 2025-12-18 16:35:07,503 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3336.7983749999994
[2025-12-18 17:35:40] 2025-12-18 16:35:07,505 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6932172801/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 17:35:40] 2025-12-18 16:35:07,505 | INFO     | extracted standard info from prmon json
[2025-12-18 17:35:40] 2025-12-18 16:35:07,505 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 17:35:40] 2025-12-18 16:35:07,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 17:35:40] 2025-12-18 16:35:07,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 17:35:40] 2025-12-18 16:35:07,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 17:35:40] 2025-12-18 16:35:07,506 | INFO     | fitting pss+swap vs Time
[2025-12-18 17:35:40] 2025-12-18 16:35:07,506 | INFO     | sum of square deviations: 106336877.5
[2025-12-18 17:35:40] 2025-12-18 16:35:07,506 | INFO     | sum of deviations: -8002692907.0
[2025-12-18 17:35:40] 2025-12-18 16:35:07,506 | INFO     | mean x: 1766073465.5
[2025-12-18 17:35:40] 2025-12-18 16:35:07,506 | INFO     | mean y: 2590429.8
[2025-12-18 17:35:40] 2025-12-18 16:35:07,506 | INFO     | intersect: 132913617421.33226
[2025-12-18 17:35:40] 2025-12-18 16:35:07,506 | INFO     | chi2: 0.048300264949368024
[2025-12-18 17:35:40] 2025-12-18 16:35:07,506 | INFO     | current memory leak: -75.26 B/s (using 70 data points, chi2=0.05)
[2025-12-18 17:35:40] 2025-12-18 16:35:07,506 | INFO     | could have reported an average CPU frequency of 3411 MHz (6 samples)
[2025-12-18 17:35:40] 2025-12-18 16:35:07,507 | INFO     | ..............................
[2025-12-18 17:35:40] 2025-12-18 16:35:07,507 | INFO     | . Timing measurements:
[2025-12-18 17:35:40] 2025-12-18 16:35:07,507 | INFO     | . get job = 0 s
[2025-12-18 17:35:40] 2025-12-18 16:35:07,507 | INFO     | . initial setup = 1 s
[2025-12-18 17:35:40] 2025-12-18 16:35:07,507 | INFO     | . payload setup = 4 s
[2025-12-18 17:35:40] 2025-12-18 16:35:07,507 | INFO     | . stage-in = 0 s
[2025-12-18 17:35:40] 2025-12-18 16:35:07,507 | INFO     | . payload execution = 4643 s
[2025-12-18 17:35:40] 2025-12-18 16:35:07,507 | INFO     | . stage-out = 0 s
[2025-12-18 17:35:40] 2025-12-18 16:35:07,507 | INFO     | . log creation = 0 s
[2025-12-18 17:35:40] 2025-12-18 16:35:07,507 | INFO     | ..............................
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | 
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | job summary report
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | --------------------------------------------------
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | PanDA job id: 6932172801
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | task id: 47886831
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | errors: (none)
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | pilot state: finished 
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | transexitcode: 0
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | exeerrorcode: 0
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | exeerrordiag: 
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | exitcode: 0
[2025-12-18 17:35:40] 2025-12-18 16:35:07,546 | INFO     | exitmsg: OK
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | cpuconsumptiontime: 17754 s
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | nevents: 400
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | neventsw: 0
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | pid: 1177474
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | pgrp: 1177474
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | corecount: 4
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | event service: False
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | sizes: {0: 2283825, 1: 2284024, 4: 2284286, 11: 2284314, 4651: 2310610, 4652: 2319614, 4653: 2319798, 4660: 2320020}
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | --------------------------------------------------
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | 
[2025-12-18 17:35:40] 2025-12-18 16:35:07,547 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,567 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 17:35:40] 2025-12-18 16:35:07,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,567 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 17:35:40] 2025-12-18 16:35:07,567 | INFO     | job 6932172801 has completed (purged errors)
[2025-12-18 17:35:40] 2025-12-18 16:35:07,567 | INFO     | overall cleanup function is called
[2025-12-18 17:35:40] 2025-12-18 16:35:08,574 | INFO     | --- collectZombieJob: --- 10, [1177474]
[2025-12-18 17:35:40] 2025-12-18 16:35:08,574 | INFO     | zombie collector waiting for pid 1177474
[2025-12-18 17:35:40] 2025-12-18 16:35:08,574 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 17:35:40] 2025-12-18 16:35:08,574 | INFO     | collected zombie processes
[2025-12-18 17:35:40] 2025-12-18 16:35:08,574 | INFO     | will attempt to kill all subprocesses of pid=1177474
[2025-12-18 17:35:40] 2025-12-18 16:35:08,620 | INFO     | process IDs to be killed: [1177474] (in reverse order)
[2025-12-18 17:35:40] 2025-12-18 16:35:08,656 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 17:35:40] 2025-12-18 16:35:08,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 17:35:40] 2025-12-18 16:35:08,658 | INFO     | did not find any defunct processes belonging to 1177474
[2025-12-18 17:35:40] 2025-12-18 16:35:08,659 | INFO     | did not find any defunct processes belonging to 1177474
[2025-12-18 17:35:40] 2025-12-18 16:35:08,659 | INFO     | ready for new job
[2025-12-18 17:35:40] 2025-12-18 16:35:08,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 17:35:40] 2025-12-18 16:35:08,660 | INFO     | ***************************************
[2025-12-18 17:35:40] 2025-12-18 16:35:08,660 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 17:35:40] 2025-12-18 16:35:08,660 | INFO     | ***************************************
[2025-12-18 17:35:40] 2025-12-18 16:35:08,660 | INFO     | 
[2025-12-18 17:35:40] 2025-12-18 16:35:08,661 | INFO     | architecture information:
[2025-12-18 17:35:40] 2025-12-18 16:35:08,661 | INFO     | executing command: cat /etc/os-release
[2025-12-18 17:35:40] 2025-12-18 16:35:08,676 | INFO     | cat /etc/os-release:
[2025-12-18 17:35:40] NAME="CentOS Linux"
[2025-12-18 17:35:40] VERSION="7 (Core)"
[2025-12-18 17:35:40] ID="centos"
[2025-12-18 17:35:40] ID_LIKE="rhel fedora"
[2025-12-18 17:35:40] VERSION_ID="7"
[2025-12-18 17:35:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 17:35:40] ANSI_COLOR="0;31"
[2025-12-18 17:35:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 17:35:40] HOME_URL="https://www.centos.org/"
[2025-12-18 17:35:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 17:35:40] 
[2025-12-18 17:35:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 17:35:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 17:35:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 17:35:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 17:35:40] 
[2025-12-18 17:35:40] 2025-12-18 16:35:08,676 | INFO     | ***************************************
[2025-12-18 17:35:40] 2025-12-18 16:35:09,179 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-18 17:35:40] 2025-12-18 16:35:09,199 | INFO     | sufficient remaining disk space (338226577408 B)
[2025-12-18 17:35:40] 2025-12-18 16:35:09,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 17:35:40] 2025-12-18 16:35:09,199 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 17:35:40] 2025-12-18 16:35:09,199 | INFO     | update_server=False
[2025-12-18 17:35:40] 2025-12-18 16:35:09,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 17:35:40] 2025-12-18 16:35:09,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 17:35:40] 2025-12-18 16:35:09,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 17:35:40] 2025-12-18 16:35:09,200 | INFO     | aborting loop
[2025-12-18 17:35:40] 2025-12-18 16:35:09,231 | INFO     | all job control threads have been joined
[2025-12-18 17:35:40] 2025-12-18 16:35:09,400 | INFO     | all payload control threads have been joined
[2025-12-18 17:35:40] 2025-12-18 16:35:10,094 | INFO     | all data control threads have been joined
[2025-12-18 17:35:40] 2025-12-18 16:35:10,205 | INFO     | [job] retrieve thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:10,205 | INFO     | [job] queue monitor thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:10,205 | INFO     | [job] job monitor thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:10,237 | INFO     | [job] control thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:10,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 17:35:40] 2025-12-18 16:35:10,315 | INFO     | [payload] failed_post thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:10,406 | INFO     | [payload] control thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:10,621 | INFO     | [job] validate thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:10,734 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:10,747 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:10,820 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:10,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 17:35:40] 2025-12-18 16:35:11,100 | INFO     | [data] control thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:11,483 | INFO     | [payload] validate_post thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:11,571 | INFO     | [data] copytool_in thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:12,304 | INFO     | [data] copytool_out thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:14,883 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:18,021 | INFO     | [monitor] cgroup control has ended
[2025-12-18 17:35:40] 2025-12-18 16:35:19,282 | INFO     | job.realtimelogging is not enabled
[2025-12-18 17:35:40] 2025-12-18 16:35:20,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 17:35:40] 2025-12-18 16:35:20,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334967179072)>', '<ExcThread(monitor, started 140333870466816)>']
[2025-12-18 17:35:40] 2025-12-18 16:35:25,477 | INFO     | all workflow threads have been joined
[2025-12-18 17:35:40] 2025-12-18 16:35:25,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 17:35:40] 2025-12-18 16:35:25,479 | INFO     | traces error code: 0
[2025-12-18 17:35:40] 2025-12-18 16:35:25,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 17:35:40] 2025-12-18 16:35:40,181 | INFO     | PID=1170904 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 17:35:40] 2025-12-18 16:35:40,181 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 17:35:40] 2025-12-18 16:35:40,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 17:35:40] 2025-12-18 16:35:40,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 17:35:40] 2025-12-18 16:35:40,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 17:35:40] 2025-12-18 16:35:40,181 | INFO     | [monitor] control thread has ended
[2025-12-18 17:35:40] 2025-12-18 16:35:40,261 [wrapper] ==== pilot stdout END ====
[2025-12-18 17:35:40] 2025-12-18 16:35:40,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 17:35:40] 2025-12-18 16:35:40,270 [wrapper] pilotpid: 1170904
[2025-12-18 17:35:40] 2025-12-18 16:35:40,274 [wrapper] Pilot exit status: 0
[2025-12-18 17:35:40] 2025-12-18 16:35:40,286 [wrapper] pandaids: 6932172801
[2025-12-18 17:35:40] 2025-12-18 16:35:40,309 [wrapper] cleanup supervisor_pilot 1189638 1170905
[2025-12-18 17:35:40] 2025-12-18 16:35:40,313 [wrapper] Test setup, not cleaning
[2025-12-18 17:35:40] 2025-12-18 16:35:40,318 [wrapper] apfmon messages muted
[2025-12-18 17:35:40] 2025-12-18 16:35:40,322 [wrapper] ==== wrapper stdout END ====
[2025-12-18 17:35:40] 2025-12-18 16:35:40,326 [wrapper] ==== wrapper stderr END ====
[2025-12-18 17:35:40]  *** Error codes and diagnostics ***
[2025-12-18 17:35:40]     "exeErrorCode": 0,
[2025-12-18 17:35:40]     "exeErrorDiag": "",
[2025-12-18 17:35:40]     "pilotErrorCode": 0,
[2025-12-18 17:35:40]     "pilotErrorDiag": "",
[2025-12-18 17:35:40]  *** Listing of results directory ***
[2025-12-18 17:35:40] total 341168
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc      5112 Dec 17 06:30 queuedata.json
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc    579449 Dec 17 06:30 pilot3.tar.gz
[2025-12-18 17:35:40] -rwx------ 1 boinc boinc     36322 Dec 17 06:30 runpilot2-wrapper.sh
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc       100 Dec 18 16:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 17:35:40] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 16:17 run_atlas
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc       105 Dec 18 16:17 job.xml
[2025-12-18 17:35:40] -rw-r--r-- 2 boinc boinc 189896717 Dec 18 16:17 EVNT.47886829._000686.pool.root.1
[2025-12-18 17:35:40] drwxrwx--x 2 boinc boinc      4096 Dec 18 16:17 shared
[2025-12-18 17:35:40] -rw-r--r-- 2 boinc boinc    592411 Dec 18 16:17 input.tar.gz
[2025-12-18 17:35:40] -rw-r--r-- 2 boinc boinc     15847 Dec 18 16:17 start_atlas.sh
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc         0 Dec 18 16:17 boinc_setup_complete
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc      6382 Dec 18 16:17 init_data.xml
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc         0 Dec 18 16:17 boinc_lockfile
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc      2539 Dec 18 16:17 pandaJob.out
[2025-12-18 17:35:40] -rw------- 1 boinc boinc    988125 Dec 18 16:17 agis_schedconf.cvmfs.json
[2025-12-18 17:35:40] -rw------- 1 boinc boinc   1516240 Dec 18 16:17 agis_ddmendpoints.agis.ALL.json
[2025-12-18 17:35:40] drwx------ 5 boinc boinc      4096 Dec 18 16:17 pilot3
[2025-12-18 17:35:40] -rw------- 1 boinc boinc 153638118 Dec 18 17:34 HITS.47886831._017196.pool.root.1
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc       529 Dec 18 17:34 boinc_task_state.xml
[2025-12-18 17:35:40] -rw------- 1 boinc boinc      1022 Dec 18 17:34 memory_monitor_summary.json
[2025-12-18 17:35:40] -rw------- 1 boinc boinc    265093 Dec 18 17:34 log.47886831._017196.job.log.tgz.1
[2025-12-18 17:35:40] -rw------- 1 boinc boinc      7767 Dec 18 17:35 heartbeat.json
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc      8192 Dec 18 17:35 boinc_mmap_file
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc        27 Dec 18 17:35 wrapper_checkpoint.txt
[2025-12-18 17:35:40] -rw------- 1 boinc boinc       747 Dec 18 17:35 pilotlog.txt
[2025-12-18 17:35:40] -rw------- 1 boinc boinc        95 Dec 18 17:35 pilot_heartbeat.json
[2025-12-18 17:35:40] -rw------- 1 boinc boinc    689964 Dec 18 17:35 log.47886831._017196.job.log.1
[2025-12-18 17:35:40] -rw------- 1 boinc boinc       357 Dec 18 17:35 output.list
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc       620 Dec 18 17:35 runtime_log
[2025-12-18 17:35:40] -rw------- 1 boinc boinc    972800 Dec 18 17:35 result.tar.gz
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc      8917 Dec 18 17:35 runtime_log.err
[2025-12-18 17:35:40] -rw------- 1 boinc boinc       662 Dec 18 17:35 prDNDmSIzp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzPbKDmaKx43m.diag
[2025-12-18 17:35:40] -rw-r--r-- 1 boinc boinc     22564 Dec 18 17:35 stderr.txt
[2025-12-18 17:35:40] HITS file was successfully produced:
[2025-12-18 17:35:40] -rw------- 1 boinc boinc 153638118 Dec 18 17:34 shared/HITS.pool.root.1
[2025-12-18 17:35:40]  *** Contents of shared directory: ***
[2025-12-18 17:35:40] total 337044
[2025-12-18 17:35:40] -rw-r--r-- 2 boinc boinc 189896717 Dec 18 16:17 ATLAS.root_0
[2025-12-18 17:35:40] -rw-r--r-- 2 boinc boinc    592411 Dec 18 16:17 input.tar.gz
[2025-12-18 17:35:40] -rw-r--r-- 2 boinc boinc     15847 Dec 18 16:17 start_atlas.sh
[2025-12-18 17:35:40] -rw------- 1 boinc boinc 153638118 Dec 18 17:34 HITS.pool.root.1
[2025-12-18 17:35:40] -rw------- 1 boinc boinc    972800 Dec 18 17:35 result.tar.gz
17:35:41 (1167099): run_atlas exited; CPU time 17769.322273
17:35:41 (1167099): called boinc_finish(0)

</stderr_txt>
]]>

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