Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:31:43 (29394): wrapper (7.7.26015): starting
05:31:43 (29394): wrapper: running run_atlas (--nthreads 8)
[2025-12-18 05:31:43] Arguments: --nthreads 8
[2025-12-18 05:31:43] Threads: 8
[2025-12-18 05:31:43] Checking for CVMFS
[2025-12-18 05:31:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 05:31:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 05:31:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 05:31:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 05:31:46] 2.11.2.0 2518 3257 73116 154134 2 99 15169980 25165824 3269 130560 0 1939686 99.763 1307331 2235 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-18 05:31:46] CVMFS is ok
[2025-12-18 05:31:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 05:31:46] Checking for apptainer binary...
[2025-12-18 05:31:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 05:31:46] Running /usr/bin/apptainer --version
[2025-12-18 05:31:46] apptainer version 1.3.2-1.el7
[2025-12-18 05:31:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 05:31:52] cg-vwn419.simple-grid.lan
[2025-12-18 05:31:52] apptainer works
[2025-12-18 05:31:52] Set ATHENA_PROC_NUMBER=8
[2025-12-18 05:31:52] Set ATHENA_CORE_NUMBER=8
[2025-12-18 05:31:53] Starting ATLAS job with PandaID=6932418276
[2025-12-18 05:31:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 11:49:55]  *** The last 200 lines of the pilot log: ***
[2025-12-18 11:49:55] 2025-12-18 10:49:15,957 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 11:49:55] 2025-12-18 10:49:17,340 | INFO     | time since job start (22462s) is within the limit (174528.0s)
[2025-12-18 11:49:55] 2025-12-18 10:49:18,014 | INFO     | monitor loop #1555: job 0:6932418276 is in state 'finished'
[2025-12-18 11:49:55] 2025-12-18 10:49:18,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 11:49:55] 2025-12-18 10:49:19,347 | INFO     | time since job start (22464s) is within the limit (174528.0s)
[2025-12-18 11:49:55] 2025-12-18 10:49:20,524 | INFO     | monitor loop #1556: job 0:6932418276 is in state 'finished'
[2025-12-18 11:49:55] 2025-12-18 10:49:20,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 11:49:55] 2025-12-18 10:49:21,354 | INFO     | time since job start (22466s) is within the limit (174528.0s)
[2025-12-18 11:49:55] 2025-12-18 10:49:22,790 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-18 11:49:55] 2025-12-18 10:49:22,791 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-18 11:49:55] 2025-12-18 10:49:22,793 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6932418276/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 11:49:55] 2025-12-18 10:49:22,793 | INFO     | extracted standard info from prmon json
[2025-12-18 11:49:55] 2025-12-18 10:49:22,794 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 11:49:55] 2025-12-18 10:49:22,794 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 11:49:55] 2025-12-18 10:49:22,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 11:49:55] 2025-12-18 10:49:22,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 11:49:55] 2025-12-18 10:49:22,801 | INFO     | fitting pss+swap vs Time
[2025-12-18 11:49:55] 2025-12-18 10:49:22,802 | INFO     | sum of square deviations: 14588031660.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,806 | INFO     | sum of deviations: 86690521063.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,807 | INFO     | mean x: 1766043932.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,807 | INFO     | mean y: 2475850.476454294
[2025-12-18 11:49:55] 2025-12-18 10:49:22,807 | INFO     | intersect: -10492378579.064135
[2025-12-18 11:49:55] 2025-12-18 10:49:22,807 | INFO     | chi2: 4.9423785893395
[2025-12-18 11:49:55] 2025-12-18 10:49:22,808 | INFO     | sum of square deviations: 13990234405.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,812 | INFO     | sum of deviations: 110771702580.49998
[2025-12-18 11:49:55] 2025-12-18 10:49:22,812 | INFO     | mean x: 1766043779.5
[2025-12-18 11:49:55] 2025-12-18 10:49:22,812 | INFO     | mean y: 2481920.4803370787
[2025-12-18 11:49:55] 2025-12-18 10:49:22,813 | INFO     | intersect: -13980677376.478996
[2025-12-18 11:49:55] 2025-12-18 10:49:22,813 | INFO     | chi2: 4.091497742784423
[2025-12-18 11:49:55] 2025-12-18 10:49:22,813 | INFO     | current chi2=4.091497742784423 (change=17.216019193478836 %)
[2025-12-18 11:49:55] 2025-12-18 10:49:22,813 | INFO     | right removable region: 355
[2025-12-18 11:49:55] 2025-12-18 10:49:22,814 | INFO     | sum of square deviations: 13990234405.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,818 | INFO     | sum of deviations: -28586253954.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,818 | INFO     | mean x: 1766044084.5
[2025-12-18 11:49:55] 2025-12-18 10:49:22,818 | INFO     | mean y: 2505220.820224719
[2025-12-18 11:49:55] 2025-12-18 10:49:22,818 | INFO     | intersect: 3611064107.82741
[2025-12-18 11:49:55] 2025-12-18 10:49:22,819 | INFO     | chi2: 1.113589293094017
[2025-12-18 11:49:55] 2025-12-18 10:49:22,819 | INFO     | current chi2=1.113589293094017 (change=77.46855541386527 %)
[2025-12-18 11:49:55] 2025-12-18 10:49:22,820 | INFO     | sum of square deviations: 13408995600.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,824 | INFO     | sum of deviations: -43554656726.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,824 | INFO     | mean x: 1766044237.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,824 | INFO     | mean y: 2509129.4786324785
[2025-12-18 11:49:55] 2025-12-18 10:49:22,824 | INFO     | intersect: 5738915703.097435
[2025-12-18 11:49:55] 2025-12-18 10:49:22,825 | INFO     | chi2: 1.0225158128086038
[2025-12-18 11:49:55] 2025-12-18 10:49:22,825 | INFO     | current chi2=1.0225158128086038 (change=8.178372479890943 %)
[2025-12-18 11:49:55] 2025-12-18 10:49:22,825 | INFO     | left removable region: 20
[2025-12-18 11:49:55] 2025-12-18 10:49:22,825 | INFO     | sum of square deviations: 11657595320.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,829 | INFO     | sum of deviations: -990433209.999975
[2025-12-18 11:49:55] 2025-12-18 10:49:22,829 | INFO     | mean x: 1766044359.0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,830 | INFO     | mean y: 2510897.6686567166
[2025-12-18 11:49:55] 2025-12-18 10:49:22,830 | INFO     | intersect: 152554618.9913418
[2025-12-18 11:49:55] 2025-12-18 10:49:22,830 | INFO     | chi2: 0.0811984156978415
[2025-12-18 11:49:55] 2025-12-18 10:49:22,831 | INFO     | current memory leak: -0.08 B/s (using 335 data points, chi2=0.08)
[2025-12-18 11:49:55] 2025-12-18 10:49:22,831 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-12-18 11:49:55] 2025-12-18 10:49:22,832 | INFO     | ..............................
[2025-12-18 11:49:55] 2025-12-18 10:49:22,832 | INFO     | . Timing measurements:
[2025-12-18 11:49:55] 2025-12-18 10:49:22,832 | INFO     | . get job = 0 s
[2025-12-18 11:49:55] 2025-12-18 10:49:22,832 | INFO     | . initial setup = 6 s
[2025-12-18 11:49:55] 2025-12-18 10:49:22,832 | INFO     | . payload setup = 123 s
[2025-12-18 11:49:55] 2025-12-18 10:49:22,832 | INFO     | . stage-in = 0 s
[2025-12-18 11:49:55] 2025-12-18 10:49:22,832 | INFO     | . payload execution = 22150 s
[2025-12-18 11:49:55] 2025-12-18 10:49:22,832 | INFO     | . stage-out = 1 s
[2025-12-18 11:49:55] 2025-12-18 10:49:22,832 | INFO     | . log creation = 0 s
[2025-12-18 11:49:55] 2025-12-18 10:49:22,832 | INFO     | ..............................
[2025-12-18 11:49:55] 2025-12-18 10:49:22,954 | INFO     | 
[2025-12-18 11:49:55] 2025-12-18 10:49:22,954 | INFO     | job summary report
[2025-12-18 11:49:55] 2025-12-18 10:49:22,954 | INFO     | --------------------------------------------------
[2025-12-18 11:49:55] 2025-12-18 10:49:22,954 | INFO     | PanDA job id: 6932418276
[2025-12-18 11:49:55] 2025-12-18 10:49:22,954 | INFO     | task id: 47905873
[2025-12-18 11:49:55] 2025-12-18 10:49:22,954 | INFO     | errors: (none)
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | pilot state: finished 
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | transexitcode: 0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | exeerrorcode: 0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | exeerrordiag: 
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | exitcode: 0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | exitmsg: OK
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | cpuconsumptiontime: 81834 s
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | nevents: 400
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | neventsw: 0
[2025-12-18 11:49:55] 2025-12-18 10:49:22,955 | INFO     | pid: 7418
[2025-12-18 11:49:55] 2025-12-18 10:49:22,956 | INFO     | pgrp: 7418
[2025-12-18 11:49:55] 2025-12-18 10:49:22,956 | INFO     | corecount: 8
[2025-12-18 11:49:55] 2025-12-18 10:49:22,956 | INFO     | event service: False
[2025-12-18 11:49:55] 2025-12-18 10:49:22,956 | INFO     | sizes: {0: 2283628, 1: 2283712, 2: 2283883, 12: 2283911, 23: 2283939, 34: 2283967, 44: 2284123, 55: 2284151, 66: 2284179, 77: 2284207, 84: 2284525, 87: 2284833, 22
[2025-12-18 11:49:55] 2025-12-18 10:49:22,956 | INFO     | --------------------------------------------------
[2025-12-18 11:49:55] 2025-12-18 10:49:22,956 | INFO     | 
[2025-12-18 11:49:55] 2025-12-18 10:49:22,956 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-12-18 11:49:55] 2025-12-18 10:49:23,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,081 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,081 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 11:49:55] 2025-12-18 10:49:23,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 11:49:55] 2025-12-18 10:49:23,083 | INFO     | job 6932418276 has completed (purged errors)
[2025-12-18 11:49:55] 2025-12-18 10:49:23,083 | INFO     | overall cleanup function is called
[2025-12-18 11:49:55] 2025-12-18 10:49:24,092 | INFO     | --- collectZombieJob: --- 10, [7418]
[2025-12-18 11:49:55] 2025-12-18 10:49:24,092 | INFO     | zombie collector waiting for pid 7418
[2025-12-18 11:49:55] 2025-12-18 10:49:24,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 11:49:55] 2025-12-18 10:49:24,092 | INFO     | collected zombie processes
[2025-12-18 11:49:55] 2025-12-18 10:49:24,092 | INFO     | will attempt to kill all subprocesses of pid=7418
[2025-12-18 11:49:55] 2025-12-18 10:49:24,207 | INFO     | process IDs to be killed: [7418] (in reverse order)
[2025-12-18 11:49:55] 2025-12-18 10:49:24,353 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 11:49:55] 2025-12-18 10:49:24,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 11:49:55] 2025-12-18 10:49:24,357 | INFO     | did not find any defunct processes belonging to 7418
[2025-12-18 11:49:55] 2025-12-18 10:49:24,360 | INFO     | did not find any defunct processes belonging to 7418
[2025-12-18 11:49:55] 2025-12-18 10:49:24,360 | INFO     | ready for new job
[2025-12-18 11:49:55] 2025-12-18 10:49:24,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 11:49:55] 2025-12-18 10:49:24,363 | INFO     | ***************************************
[2025-12-18 11:49:55] 2025-12-18 10:49:24,363 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 11:49:55] 2025-12-18 10:49:24,363 | INFO     | ***************************************
[2025-12-18 11:49:55] 2025-12-18 10:49:24,363 | INFO     | 
[2025-12-18 11:49:55] 2025-12-18 10:49:24,364 | INFO     | pilot is running in a VM
[2025-12-18 11:49:55] 2025-12-18 10:49:24,364 | INFO     | architecture information:
[2025-12-18 11:49:55] 2025-12-18 10:49:24,366 | INFO     | executing command: cat /etc/os-release
[2025-12-18 11:49:55] 2025-12-18 10:49:24,394 | INFO     | cat /etc/os-release:
[2025-12-18 11:49:55] NAME="CentOS Linux"
[2025-12-18 11:49:55] VERSION="7 (Core)"
[2025-12-18 11:49:55] ID="centos"
[2025-12-18 11:49:55] ID_LIKE="rhel fedora"
[2025-12-18 11:49:55] VERSION_ID="7"
[2025-12-18 11:49:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 11:49:55] ANSI_COLOR="0;31"
[2025-12-18 11:49:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 11:49:55] HOME_URL="https://www.centos.org/"
[2025-12-18 11:49:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 11:49:55] 
[2025-12-18 11:49:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 11:49:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 11:49:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 11:49:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 11:49:55] 
[2025-12-18 11:49:55] 2025-12-18 10:49:24,395 | INFO     | ***************************************
[2025-12-18 11:49:55] 2025-12-18 10:49:24,898 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-12-18 11:49:55] 2025-12-18 10:49:24,937 | INFO     | sufficient remaining disk space (496519610368 B)
[2025-12-18 11:49:55] 2025-12-18 10:49:24,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 11:49:55] 2025-12-18 10:49:24,938 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 11:49:55] 2025-12-18 10:49:24,938 | INFO     | update_server=False
[2025-12-18 11:49:55] 2025-12-18 10:49:24,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 11:49:55] 2025-12-18 10:49:24,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 11:49:55] 2025-12-18 10:49:24,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 11:49:55] 2025-12-18 10:49:24,944 | INFO     | aborting loop
[2025-12-18 11:49:55] 2025-12-18 10:49:25,329 | INFO     | all data control threads have been joined
[2025-12-18 11:49:55] 2025-12-18 10:49:25,944 | INFO     | [job] retrieve thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:25,944 | INFO     | [job] queue monitor thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:25,950 | INFO     | [job] job monitor thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:25,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 11:49:55] 2025-12-18 10:49:26,060 | INFO     | [payload] failed_post thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:26,105 | INFO     | all payload control threads have been joined
[2025-12-18 11:49:55] 2025-12-18 10:49:26,334 | INFO     | [data] control thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:26,396 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:26,424 | INFO     | all job control threads have been joined
[2025-12-18 11:49:55] 2025-12-18 10:49:26,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 11:49:55] 2025-12-18 10:49:26,697 | INFO     | [payload] validate_post thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:26,880 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:26,920 | INFO     | [job] validate thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:27,065 | INFO     | [data] copytool_in thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:27,110 | INFO     | [payload] control thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:27,229 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:27,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:27,429 | INFO     | [job] control thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:27,994 | INFO     | [data] copytool_out thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:30,448 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 11:49:55] 2025-12-18 10:49:33,684 | INFO     | [monitor] cgroup control has ended
[2025-12-18 11:49:55] 2025-12-18 10:49:35,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139982742062912)>', '<ExcThread(monitor, started 139982161303296)>']
[2025-12-18 11:49:55] 2025-12-18 10:49:40,718 | INFO     | all workflow threads have been joined
[2025-12-18 11:49:55] 2025-12-18 10:49:40,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 11:49:55] 2025-12-18 10:49:40,718 | INFO     | traces error code: 0
[2025-12-18 11:49:55] 2025-12-18 10:49:40,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 11:49:55] 2025-12-18 10:49:54,515 | INFO     | PID=756 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-12-18 11:49:55] 2025-12-18 10:49:54,515 | INFO     | .. there are 8 such processes running
[2025-12-18 11:49:55] 2025-12-18 10:49:54,516 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 11:49:55] 2025-12-18 10:49:54,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 11:49:55] 2025-12-18 10:49:54,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 11:49:55] 2025-12-18 10:49:54,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 11:49:55] 2025-12-18 10:49:54,516 | INFO     | [monitor] control thread has ended
[2025-12-18 11:49:55] 2025-12-18 10:49:54,727 [wrapper] ==== pilot stdout END ====
[2025-12-18 11:49:55] 2025-12-18 10:49:54,764 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 11:49:55] 2025-12-18 10:49:54,786 [wrapper] pilotpid: 756
[2025-12-18 11:49:55] 2025-12-18 10:49:54,798 [wrapper] Pilot exit status: 0
[2025-12-18 11:49:55] 2025-12-18 10:49:55,060 [wrapper] pandaids: 6932418276
[2025-12-18 11:49:55] 2025-12-18 10:49:55,103 [wrapper] cleanup supervisor_pilot 29478 757
[2025-12-18 11:49:55] 2025-12-18 10:49:55,119 [wrapper] Test setup, not cleaning
[2025-12-18 11:49:55] 2025-12-18 10:49:55,124 [wrapper] apfmon messages muted
[2025-12-18 11:49:55] 2025-12-18 10:49:55,135 [wrapper] ==== wrapper stdout END ====
[2025-12-18 11:49:55] 2025-12-18 10:49:55,138 [wrapper] ==== wrapper stderr END ====
[2025-12-18 11:49:55]  *** Error codes and diagnostics ***
[2025-12-18 11:49:55]     "exeErrorCode": 0,
[2025-12-18 11:49:55]     "exeErrorDiag": "",
[2025-12-18 11:49:55]     "pilotErrorCode": 0,
[2025-12-18 11:49:55]     "pilotErrorDiag": "",
[2025-12-18 11:49:55]  *** Listing of results directory ***
[2025-12-18 11:49:55] total 414220
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc    579449 Dec 17 12:17 pilot3.tar.gz
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc      5112 Dec 17 12:19 queuedata.json
[2025-12-18 11:49:55] -rwx------. 1 boinc boinc     36322 Dec 17 12:21 runpilot2-wrapper.sh
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc       100 Dec 18 05:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 11:49:55] -rwxr-xr-x. 1 boinc boinc      7986 Dec 18 05:31 run_atlas
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc       105 Dec 18 05:31 job.xml
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc      6391 Dec 18 05:31 init_data.xml
[2025-12-18 11:49:55] -rw-r--r--. 2 boinc boinc 205747273 Dec 18 05:31 EVNT.47905871._000040.pool.root.1
[2025-12-18 11:49:55] -rw-r--r--. 2 boinc boinc     15847 Dec 18 05:31 start_atlas.sh
[2025-12-18 11:49:55] drwxrwx--x. 2 boinc boinc        68 Dec 18 05:31 shared
[2025-12-18 11:49:55] -rw-r--r--. 2 boinc boinc    592382 Dec 18 05:31 input.tar.gz
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc         0 Dec 18 05:31 boinc_lockfile
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc      2469 Dec 18 05:31 pandaJob.out
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc    988110 Dec 18 05:34 agis_schedconf.cvmfs.json
[2025-12-18 11:49:55] drwx------. 5 boinc boinc      4096 Dec 18 05:34 pilot3
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc 207406577 Dec 18 11:48 HITS.47905873._001068.pool.root.1
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc       531 Dec 18 11:49 boinc_task_state.xml
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc        95 Dec 18 11:49 pilot_heartbeat.json
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc      1014 Dec 18 11:49 memory_monitor_summary.json
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc   1516240 Dec 18 11:49 agis_ddmendpoints.agis.ALL.json
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc    573899 Dec 18 11:49 log.47905873._001068.job.log.tgz.1
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc      7771 Dec 18 11:49 heartbeat.json
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc      8192 Dec 18 11:49 boinc_mmap_file
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc        28 Dec 18 11:49 wrapper_checkpoint.txt
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc       818 Dec 18 11:49 pilotlog.txt
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc   2980917 Dec 18 11:49 log.47905873._001068.job.log.1
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc       357 Dec 18 11:49 output.list
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc       620 Dec 18 11:49 runtime_log
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc   3573760 Dec 18 11:49 result.tar.gz
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc      8833 Dec 18 11:49 runtime_log.err
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc       658 Dec 18 11:49 IBgNDmGm4p8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmz5bKDmKtrwrn.diag
[2025-12-18 11:49:55] -rw-r--r--. 1 boinc boinc     21084 Dec 18 11:49 stderr.txt
[2025-12-18 11:49:55] HITS file was successfully produced:
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc 207406577 Dec 18 11:48 shared/HITS.pool.root.1
[2025-12-18 11:49:55]  *** Contents of shared directory: ***
[2025-12-18 11:49:55] total 407564
[2025-12-18 11:49:55] -rw-r--r--. 2 boinc boinc 205747273 Dec 18 05:31 ATLAS.root_0
[2025-12-18 11:49:55] -rw-r--r--. 2 boinc boinc     15847 Dec 18 05:31 start_atlas.sh
[2025-12-18 11:49:55] -rw-r--r--. 2 boinc boinc    592382 Dec 18 05:31 input.tar.gz
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc 207406577 Dec 18 11:48 HITS.pool.root.1
[2025-12-18 11:49:55] -rw-------. 1 boinc boinc   3573760 Dec 18 11:49 result.tar.gz
11:49:56 (29394): run_atlas exited; CPU time 82148.939327
11:49:56 (29394): called boinc_finish(0)

</stderr_txt>
]]>

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