Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:37:54 (2061224): wrapper (7.7.26015): starting
17:37:54 (2061224): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 17:37:54] Arguments: --nthreads 8
[2025-12-17 17:37:54] Threads: 8
[2025-12-17 17:37:54] Checking for CVMFS
[2025-12-17 17:37:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 17:37:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 17:37:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 17:37:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 17:37:54] 2.13.2.0 2681929 10139 81860 154125 2 188 26648369 39288833 2840 16776704 0 22171590 99.997 306273 38327 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 17:37:54] CVMFS is ok
[2025-12-17 17:37:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 17:37:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 17:37:54] Further information can be found at the LHC@home message board.
[2025-12-17 17:37:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 17:37:54] Checking for apptainer binary...
[2025-12-17 17:37:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 17:37:54] Running /usr/bin/apptainer --version
[2025-12-17 17:37:54] apptainer version 1.4.5-2.el9
[2025-12-17 17:37:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 17:37:54] c-210-16.aglt2.org
[2025-12-17 17:37:54] apptainer works
[2025-12-17 17:37:54] Set ATHENA_PROC_NUMBER=8
[2025-12-17 17:37:54] Set ATHENA_CORE_NUMBER=8
[2025-12-17 17:37:54] Starting ATLAS job with PandaID=6932535748
[2025-12-17 17:37:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 21:02:38]  *** The last 200 lines of the pilot log: ***
[2025-12-17 21:02:38] 2025-12-18 02:02:03,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 21:02:38] 2025-12-18 02:02:04,957 | INFO     | time since job start (12240s) is within the limit (174528.0s)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,362 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 21:02:38] 2025-12-18 02:02:05,368 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2640.2086500000005
[2025-12-17 21:02:38] 2025-12-18 02:02:05,375 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6932535748/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,376 | INFO     | extracted standard info from prmon json
[2025-12-17 21:02:38] 2025-12-18 02:02:05,376 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 21:02:38] 2025-12-18 02:02:05,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 21:02:38] 2025-12-18 02:02:05,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 21:02:38] 2025-12-18 02:02:05,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 21:02:38] 2025-12-18 02:02:05,381 | INFO     | fitting pss+swap vs Time
[2025-12-17 21:02:38] 2025-12-18 02:02:05,382 | INFO     | sum of square deviations: 2518000700.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,383 | INFO     | sum of deviations: 26272492783.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,383 | INFO     | mean x: 1766017207.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,383 | INFO     | mean y: 2566986.805970149
[2025-12-17 21:02:38] 2025-12-18 02:02:05,383 | INFO     | intersect: -18423827543.41053
[2025-12-17 21:02:38] 2025-12-18 02:02:05,384 | INFO     | chi2: 2.21072353084923
[2025-12-17 21:02:38] 2025-12-18 02:02:05,384 | INFO     | sum of square deviations: 2334722845.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,385 | INFO     | sum of deviations: 38431906250.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,386 | INFO     | mean x: 1766017054.5
[2025-12-17 21:02:38] 2025-12-18 02:02:05,386 | INFO     | mean y: 2576884.8469387754
[2025-12-17 21:02:38] 2025-12-18 02:02:05,386 | INFO     | intersect: -29067855187.978024
[2025-12-17 21:02:38] 2025-12-18 02:02:05,386 | INFO     | chi2: 1.5228406744309506
[2025-12-17 21:02:38] 2025-12-18 02:02:05,386 | INFO     | current chi2=1.5228406744309506 (change=31.115734139493927 %)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,387 | INFO     | sum of square deviations: 2160561440.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,388 | INFO     | sum of deviations: 37282756225.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,388 | INFO     | mean x: 1766016902.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,388 | INFO     | mean y: 2575878.4083769633
[2025-12-17 21:02:38] 2025-12-18 02:02:05,389 | INFO     | intersect: -30471900073.77547
[2025-12-17 21:02:38] 2025-12-18 02:02:05,389 | INFO     | chi2: 1.5234768714388016
[2025-12-17 21:02:38] 2025-12-18 02:02:05,389 | INFO     | current chi2=1.5234768714388016 (change=-0.04177699076029306 %)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,389 | INFO     | right removable region: 190
[2025-12-17 21:02:38] 2025-12-18 02:02:05,390 | INFO     | sum of square deviations: 2334722845.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,391 | INFO     | sum of deviations: -8469752979.5
[2025-12-17 21:02:38] 2025-12-18 02:02:05,391 | INFO     | mean x: 1766017359.5
[2025-12-17 21:02:38] 2025-12-18 02:02:05,391 | INFO     | mean y: 2595631.923469388
[2025-12-17 21:02:38] 2025-12-18 02:02:05,391 | INFO     | intersect: 6409236499.171183
[2025-12-17 21:02:38] 2025-12-18 02:02:05,392 | INFO     | chi2: 0.7360680474555542
[2025-12-17 21:02:38] 2025-12-18 02:02:05,392 | INFO     | current chi2=0.7360680474555542 (change=66.70465405627631 %)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,392 | INFO     | sum of square deviations: 2160561440.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,393 | INFO     | sum of deviations: -11615937444.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,393 | INFO     | mean x: 1766017512.0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,394 | INFO     | mean y: 2598342.523560209
[2025-12-17 21:02:38] 2025-12-18 02:02:05,394 | INFO     | intersect: 9497329001.236288
[2025-12-17 21:02:38] 2025-12-18 02:02:05,394 | INFO     | chi2: 0.7130696495602067
[2025-12-17 21:02:38] 2025-12-18 02:02:05,394 | INFO     | current chi2=0.7130696495602067 (change=3.124493445252591 %)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,394 | INFO     | left removable region: 20
[2025-12-17 21:02:38] 2025-12-18 02:02:05,395 | INFO     | sum of square deviations: 1523386702.5
[2025-12-17 21:02:38] 2025-12-18 02:02:05,396 | INFO     | sum of deviations: 1761708334.5
[2025-12-17 21:02:38] 2025-12-18 02:02:05,396 | INFO     | mean x: 1766017481.5
[2025-12-17 21:02:38] 2025-12-18 02:02:05,396 | INFO     | mean y: 2608233.9588235295
[2025-12-17 21:02:38] 2025-12-18 02:02:05,396 | INFO     | intersect: -2039688519.0097482
[2025-12-17 21:02:38] 2025-12-18 02:02:05,396 | INFO     | chi2: 0.006994647936923257
[2025-12-17 21:02:38] 2025-12-18 02:02:05,397 | INFO     | current memory leak: 1.16 B/s (using 170 data points, chi2=0.01)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,397 | INFO     | could have reported an average CPU frequency of 2606 MHz (10 samples)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,397 | INFO     | ..............................
[2025-12-17 21:02:38] 2025-12-18 02:02:05,397 | INFO     | . Timing measurements:
[2025-12-17 21:02:38] 2025-12-18 02:02:05,397 | INFO     | . get job = 0 s
[2025-12-17 21:02:38] 2025-12-18 02:02:05,398 | INFO     | . initial setup = 2 s
[2025-12-17 21:02:38] 2025-12-18 02:02:05,398 | INFO     | . payload setup = 4 s
[2025-12-17 21:02:38] 2025-12-18 02:02:05,398 | INFO     | . stage-in = 0 s
[2025-12-17 21:02:38] 2025-12-18 02:02:05,398 | INFO     | . payload execution = 12207 s
[2025-12-17 21:02:38] 2025-12-18 02:02:05,398 | INFO     | . stage-out = 2 s
[2025-12-17 21:02:38] 2025-12-18 02:02:05,398 | INFO     | . log creation = 0 s
[2025-12-17 21:02:38] 2025-12-18 02:02:05,398 | INFO     | ..............................
[2025-12-17 21:02:38] 2025-12-18 02:02:05,505 | INFO     | 
[2025-12-17 21:02:38] 2025-12-18 02:02:05,505 | INFO     | job summary report
[2025-12-17 21:02:38] 2025-12-18 02:02:05,506 | INFO     | --------------------------------------------------
[2025-12-17 21:02:38] 2025-12-18 02:02:05,506 | INFO     | PanDA job id: 6932535748
[2025-12-17 21:02:38] 2025-12-18 02:02:05,506 | INFO     | task id: 47928900
[2025-12-17 21:02:38] 2025-12-18 02:02:05,506 | INFO     | errors: (none)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,506 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 21:02:38] 2025-12-18 02:02:05,506 | INFO     | pilot state: finished 
[2025-12-17 21:02:38] 2025-12-18 02:02:05,506 | INFO     | transexitcode: 0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,506 | INFO     | exeerrorcode: 0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,506 | INFO     | exeerrordiag: 
[2025-12-17 21:02:38] 2025-12-18 02:02:05,507 | INFO     | exitcode: 0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,507 | INFO     | exitmsg: OK
[2025-12-17 21:02:38] 2025-12-18 02:02:05,507 | INFO     | cpuconsumptiontime: 92505 s
[2025-12-17 21:02:38] 2025-12-18 02:02:05,507 | INFO     | nevents: 400
[2025-12-17 21:02:38] 2025-12-18 02:02:05,507 | INFO     | neventsw: 0
[2025-12-17 21:02:38] 2025-12-18 02:02:05,507 | INFO     | pid: 2082039
[2025-12-17 21:02:38] 2025-12-18 02:02:05,507 | INFO     | pgrp: 2082039
[2025-12-17 21:02:38] 2025-12-18 02:02:05,507 | INFO     | corecount: 8
[2025-12-17 21:02:38] 2025-12-18 02:02:05,507 | INFO     | event service: False
[2025-12-17 21:02:38] 2025-12-18 02:02:05,508 | INFO     | sizes: {0: 2284041, 4: 2284303, 11: 2284331, 12215: 2313954, 12219: 2322952, 12222: 2323008, 12226: 2323330}
[2025-12-17 21:02:38] 2025-12-18 02:02:05,508 | INFO     | --------------------------------------------------
[2025-12-17 21:02:38] 2025-12-18 02:02:05,508 | INFO     | 
[2025-12-17 21:02:38] 2025-12-18 02:02:05,508 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-17 21:02:38] 2025-12-18 02:02:05,524 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,525 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,525 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,525 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,526 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,526 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,527 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,527 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 21:02:38] 2025-12-18 02:02:05,527 | INFO     | job 6932535748 has completed (purged errors)
[2025-12-17 21:02:38] 2025-12-18 02:02:05,527 | INFO     | overall cleanup function is called
[2025-12-17 21:02:38] 2025-12-18 02:02:06,531 | INFO     | --- collectZombieJob: --- 10, [2082039]
[2025-12-17 21:02:38] 2025-12-18 02:02:06,531 | INFO     | zombie collector waiting for pid 2082039
[2025-12-17 21:02:38] 2025-12-18 02:02:06,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 21:02:38] 2025-12-18 02:02:06,531 | INFO     | collected zombie processes
[2025-12-17 21:02:38] 2025-12-18 02:02:06,531 | INFO     | will attempt to kill all subprocesses of pid=2082039
[2025-12-17 21:02:38] 2025-12-18 02:02:06,756 | INFO     | process IDs to be killed: [2082039] (in reverse order)
[2025-12-17 21:02:38] 2025-12-18 02:02:06,818 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 21:02:38] 2025-12-18 02:02:06,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 21:02:38] 2025-12-18 02:02:06,825 | INFO     | did not find any defunct processes belonging to 2082039
[2025-12-17 21:02:38] 2025-12-18 02:02:06,830 | INFO     | did not find any defunct processes belonging to 2082039
[2025-12-17 21:02:38] 2025-12-18 02:02:06,830 | INFO     | ready for new job
[2025-12-17 21:02:38] 2025-12-18 02:02:06,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 21:02:38] 2025-12-18 02:02:06,833 | INFO     | ***************************************
[2025-12-17 21:02:38] 2025-12-18 02:02:06,833 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 21:02:38] 2025-12-18 02:02:06,833 | INFO     | ***************************************
[2025-12-17 21:02:38] 2025-12-18 02:02:06,833 | INFO     | 
[2025-12-17 21:02:38] 2025-12-18 02:02:06,835 | INFO     | architecture information:
[2025-12-17 21:02:38] 2025-12-18 02:02:06,835 | INFO     | executing command: cat /etc/os-release
[2025-12-17 21:02:38] 2025-12-18 02:02:06,849 | INFO     | cat /etc/os-release:
[2025-12-17 21:02:38] NAME="CentOS Linux"
[2025-12-17 21:02:38] VERSION="7 (Core)"
[2025-12-17 21:02:38] ID="centos"
[2025-12-17 21:02:38] ID_LIKE="rhel fedora"
[2025-12-17 21:02:38] VERSION_ID="7"
[2025-12-17 21:02:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 21:02:38] ANSI_COLOR="0;31"
[2025-12-17 21:02:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 21:02:38] HOME_URL="https://www.centos.org/"
[2025-12-17 21:02:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 21:02:38] 
[2025-12-17 21:02:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 21:02:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 21:02:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 21:02:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 21:02:38] 
[2025-12-17 21:02:38] 2025-12-18 02:02:06,850 | INFO     | ***************************************
[2025-12-17 21:02:38] 2025-12-18 02:02:07,353 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-17 21:02:38] 2025-12-18 02:02:07,368 | INFO     | sufficient remaining disk space (51200917504 B)
[2025-12-17 21:02:38] 2025-12-18 02:02:07,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 21:02:38] 2025-12-18 02:02:07,369 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 21:02:38] 2025-12-18 02:02:07,369 | INFO     | update_server=False
[2025-12-17 21:02:38] 2025-12-18 02:02:07,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 21:02:38] 2025-12-18 02:02:07,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 21:02:38] 2025-12-18 02:02:07,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 21:02:38] 2025-12-18 02:02:07,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 21:02:38] 2025-12-18 02:02:07,381 | INFO     | aborting loop
[2025-12-17 21:02:38] 2025-12-18 02:02:07,623 | INFO     | all payload control threads have been joined
[2025-12-17 21:02:38] 2025-12-18 02:02:07,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 21:02:38] 2025-12-18 02:02:08,267 | INFO     | all data control threads have been joined
[2025-12-17 21:02:38] 2025-12-18 02:02:08,370 | INFO     | [job] queue monitor thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:08,372 | INFO     | [job] retrieve thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:08,386 | INFO     | [job] job monitor thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:08,482 | INFO     | [payload] validate_post thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:08,629 | INFO     | [payload] control thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:08,651 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:08,900 | INFO     | all job control threads have been joined
[2025-12-17 21:02:38] 2025-12-18 02:02:08,994 | INFO     | [data] copytool_in thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:09,006 | INFO     | [job] validate thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:09,260 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:09,270 | INFO     | [data] control thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:09,376 | INFO     | [data] copytool_out thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:09,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:09,639 | INFO     | [payload] failed_post thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:09,791 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:09,905 | INFO     | [job] control thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:11,787 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 21:02:38] 2025-12-18 02:02:24,479 | INFO     | [monitor] cgroup control has ended
[2025-12-17 21:02:38] 2025-12-18 02:02:26,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140619212420928)>', '<ExcThread(monitor, started 140618638554880)>']
[2025-12-17 21:02:38] 2025-12-18 02:02:31,022 | INFO     | all workflow threads have been joined
[2025-12-17 21:02:38] 2025-12-18 02:02:31,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 21:02:38] 2025-12-18 02:02:31,023 | INFO     | traces error code: 0
[2025-12-17 21:02:38] 2025-12-18 02:02:31,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 21:02:38] 2025-12-18 02:02:38,302 | INFO     | PID=2065875 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 21:02:38] 2025-12-18 02:02:38,302 | INFO     | .. there are 5 such processes running
[2025-12-17 21:02:38] 2025-12-18 02:02:38,303 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 21:02:38] 2025-12-18 02:02:38,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 21:02:38] 2025-12-18 02:02:38,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 21:02:38] 2025-12-18 02:02:38,304 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 21:02:38] 2025-12-18 02:02:38,304 | INFO     | [monitor] control thread has ended
[2025-12-17 21:02:38] 2025-12-18 02:02:38,429 [wrapper] ==== pilot stdout END ====
[2025-12-17 21:02:38] 2025-12-18 02:02:38,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 21:02:38] 2025-12-18 02:02:38,434 [wrapper] pilotpid: 2065875
[2025-12-17 21:02:38] 2025-12-18 02:02:38,436 [wrapper] Pilot exit status: 0
[2025-12-17 21:02:38] 2025-12-18 02:02:38,446 [wrapper] pandaids: 6932535748
[2025-12-17 21:02:38] 2025-12-18 02:02:38,485 [wrapper] cleanup supervisor_pilot 2376172 2065876
[2025-12-17 21:02:38] 2025-12-18 02:02:38,488 [wrapper] Test setup, not cleaning
[2025-12-17 21:02:38] 2025-12-18 02:02:38,490 [wrapper] apfmon messages muted
[2025-12-17 21:02:38] 2025-12-18 02:02:38,492 [wrapper] ==== wrapper stdout END ====
[2025-12-17 21:02:38] 2025-12-18 02:02:38,494 [wrapper] ==== wrapper stderr END ====
[2025-12-17 21:02:38]  *** Error codes and diagnostics ***
[2025-12-17 21:02:38]     "exeErrorCode": 0,
[2025-12-17 21:02:38]     "exeErrorDiag": "",
[2025-12-17 21:02:38]     "pilotErrorCode": 0,
[2025-12-17 21:02:38]     "pilotErrorDiag": "",
[2025-12-17 21:02:38]  *** Listing of results directory ***
[2025-12-17 21:02:38] total 703824
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 12:11 pilot3.tar.gz
[2025-12-17 21:02:38] -rwx------. 1 boincer umatlas     36322 Dec 17 12:14 runpilot2-wrapper.sh
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 12:15 queuedata.json
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas       100 Dec 17 17:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 21:02:38] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 17:37 run_atlas
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas       105 Dec 17 17:37 job.xml
[2025-12-17 21:02:38] -rw-r--r--. 2 boincer umatlas 353916980 Dec 17 17:37 EVNT.47928898._000002.pool.root.1
[2025-12-17 21:02:38] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 17:37 start_atlas.sh
[2025-12-17 21:02:38] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 17:37 shared
[2025-12-17 21:02:38] -rw-r--r--. 2 boincer umatlas    592413 Dec 17 17:37 input.tar.gz
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas         0 Dec 17 17:37 boinc_lockfile
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas      2573 Dec 17 17:37 pandaJob.out
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas        57 Dec 17 17:37 setup.sh.local
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas    988134 Dec 17 17:38 agis_schedconf.cvmfs.json
[2025-12-17 21:02:38] drwx------. 5 boincer umatlas      4096 Dec 17 17:38 pilot3
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas       531 Dec 17 21:00 boinc_task_state.xml
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas 358540459 Dec 17 21:00 HITS.47928900._000040.pool.root.1
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas      6664 Dec 17 21:01 init_data.xml
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas      1035 Dec 17 21:01 memory_monitor_summary.json
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas   1516240 Dec 17 21:01 agis_ddmendpoints.agis.ALL.json
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas    441624 Dec 17 21:01 log.47928900._000040.job.log.tgz.1
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas      7801 Dec 17 21:02 heartbeat.json
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 21:02 boinc_mmap_file
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas        28 Dec 17 21:02 wrapper_checkpoint.txt
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas        95 Dec 17 21:02 pilot_heartbeat.json
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas       822 Dec 17 21:02 pilotlog.txt
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas   1729350 Dec 17 21:02 log.47928900._000040.job.log.1
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas       357 Dec 17 21:02 output.list
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas       620 Dec 17 21:02 runtime_log
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas   2191360 Dec 17 21:02 result.tar.gz
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas       655 Dec 17 21:02 wodMDm1HAq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZVcKDmpf41ym.diag
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas      9343 Dec 17 21:02 runtime_log.err
[2025-12-17 21:02:38] -rw-r--r--. 1 boincer umatlas     21095 Dec 17 21:02 stderr.txt
[2025-12-17 21:02:38] HITS file was successfully produced:
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas 358540459 Dec 17 21:00 shared/HITS.pool.root.1
[2025-12-17 21:02:38]  *** Contents of shared directory: ***
[2025-12-17 21:02:38] total 698508
[2025-12-17 21:02:38] -rw-r--r--. 2 boincer umatlas 353916980 Dec 17 17:37 ATLAS.root_0
[2025-12-17 21:02:38] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 17:37 start_atlas.sh
[2025-12-17 21:02:38] -rw-r--r--. 2 boincer umatlas    592413 Dec 17 17:37 input.tar.gz
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas 358540459 Dec 17 21:00 HITS.pool.root.1
[2025-12-17 21:02:38] -rw-------. 1 boincer umatlas   2191360 Dec 17 21:02 result.tar.gz
21:03:00 (2061224): run_atlas exited; CPU time 92800.515931
21:03:00 (2061224): called boinc_finish(0)

</stderr_txt>
]]>

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