Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:21:00 (1989350): wrapper (7.7.26015): starting
17:21:00 (1989350): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 17:21:00] Arguments: --nthreads 8
[2025-12-17 17:21:00] Threads: 8
[2025-12-17 17:21:00] Checking for CVMFS
[2025-12-17 17:21:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 17:21:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 17:21:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 17:21:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 17:21:00] 2.13.2.0 2681929 10122 80716 154125 2 57 26622741 39288833 1832 16776704 0 21993942 99.997 306191 38336 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 17:21:00] CVMFS is ok
[2025-12-17 17:21:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 17:21:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 17:21:00] Further information can be found at the LHC@home message board.
[2025-12-17 17:21:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 17:21:00] Checking for apptainer binary...
[2025-12-17 17:21:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 17:21:00] Running /usr/bin/apptainer --version
[2025-12-17 17:21:01] apptainer version 1.4.5-2.el9
[2025-12-17 17:21:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 17:21:01] c-210-16.aglt2.org
[2025-12-17 17:21:01] apptainer works
[2025-12-17 17:21:01] Set ATHENA_PROC_NUMBER=8
[2025-12-17 17:21:01] Set ATHENA_CORE_NUMBER=8
[2025-12-17 17:21:01] Starting ATLAS job with PandaID=6932560638
[2025-12-17 17:21:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 19:08:25]  *** The last 200 lines of the pilot log: ***
[2025-12-17 19:08:25] 2025-12-18 00:07:19,351 | INFO     | executing command: lscpu
[2025-12-17 19:08:25] 2025-12-18 00:07:19,392 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 19:08:25] 2025-12-18 00:07:19,913 | INFO     | time since job start (6370s) is within the limit (174528.0s)
[2025-12-17 19:08:25] 2025-12-18 00:07:21,331 | INFO     | monitor loop #469: job 0:6932560638 is in state 'finished'
[2025-12-17 19:08:25] 2025-12-18 00:07:21,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:08:25] 2025-12-18 00:07:21,919 | INFO     | time since job start (6372s) is within the limit (174528.0s)
[2025-12-17 19:08:25] 2025-12-18 00:07:22,941 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 19:08:25] 2025-12-18 00:07:22,958 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2620.1380249999997
[2025-12-17 19:08:25] 2025-12-18 00:07:22,966 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6932560638/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 19:08:25] 2025-12-18 00:07:22,967 | INFO     | extracted standard info from prmon json
[2025-12-17 19:08:25] 2025-12-18 00:07:22,967 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 19:08:25] 2025-12-18 00:07:22,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 19:08:25] 2025-12-18 00:07:22,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 19:08:25] 2025-12-18 00:07:22,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 19:08:25] 2025-12-18 00:07:22,969 | INFO     | fitting pss+swap vs Time
[2025-12-17 19:08:25] 2025-12-18 00:07:22,970 | INFO     | sum of square deviations: 348769330.0
[2025-12-17 19:08:25] 2025-12-18 00:07:22,970 | INFO     | sum of deviations: 6006559254.499999
[2025-12-17 19:08:25] 2025-12-18 00:07:22,970 | INFO     | mean x: 1766013230.5
[2025-12-17 19:08:25] 2025-12-18 00:07:22,970 | INFO     | mean y: 2503088.778846154
[2025-12-17 19:08:25] 2025-12-18 00:07:22,971 | INFO     | intersect: -30412049455.819084
[2025-12-17 19:08:25] 2025-12-18 00:07:22,971 | INFO     | chi2: 1.1883626764228628
[2025-12-17 19:08:25] 2025-12-18 00:07:22,971 | INFO     | sum of square deviations: 300842850.0
[2025-12-17 19:08:25] 2025-12-18 00:07:22,971 | INFO     | sum of deviations: 5971079062.000002
[2025-12-17 19:08:25] 2025-12-18 00:07:22,972 | INFO     | mean x: 1766013078.0
[2025-12-17 19:08:25] 2025-12-18 00:07:22,972 | INFO     | mean y: 2502976.202020202
[2025-12-17 19:08:25] 2025-12-18 00:07:22,972 | INFO     | intersect: -35049032113.510025
[2025-12-17 19:08:25] 2025-12-18 00:07:22,972 | INFO     | chi2: 1.19056778543696
[2025-12-17 19:08:25] 2025-12-18 00:07:22,972 | INFO     | current chi2=1.19056778543696 (change=-0.18555858895998 %)
[2025-12-17 19:08:25] 2025-12-18 00:07:22,972 | INFO     | right removable region: 98
[2025-12-17 19:08:25] 2025-12-18 00:07:22,972 | INFO     | sum of square deviations: 300842850.0
[2025-12-17 19:08:25] 2025-12-18 00:07:22,973 | INFO     | sum of deviations: -6280430375.000001
[2025-12-17 19:08:25] 2025-12-18 00:07:22,973 | INFO     | mean x: 1766013383.0
[2025-12-17 19:08:25] 2025-12-18 00:07:22,973 | INFO     | mean y: 2541145.6868686867
[2025-12-17 19:08:25] 2025-12-18 00:07:22,973 | INFO     | intersect: 36870042212.27266
[2025-12-17 19:08:25] 2025-12-18 00:07:22,973 | INFO     | chi2: 0.007735549137246946
[2025-12-17 19:08:25] 2025-12-18 00:07:22,974 | INFO     | current chi2=0.007735549137246946 (change=99.34905822181052 %)
[2025-12-17 19:08:25] 2025-12-18 00:07:22,974 | INFO     | sum of square deviations: 257521107.5
[2025-12-17 19:08:25] 2025-12-18 00:07:22,974 | INFO     | sum of deviations: -5647292769.999999
[2025-12-17 19:08:25] 2025-12-18 00:07:22,974 | INFO     | mean x: 1766013535.5
[2025-12-17 19:08:25] 2025-12-18 00:07:22,974 | INFO     | mean y: 2538896.6170212766
[2025-12-17 19:08:25] 2025-12-18 00:07:22,975 | INFO     | intersect: 38730220551.8044
[2025-12-17 19:08:25] 2025-12-18 00:07:22,975 | INFO     | chi2: 0.007315074091340866
[2025-12-17 19:08:25] 2025-12-18 00:07:22,975 | INFO     | current chi2=0.007315074091340866 (change=5.4356198693312905 %)
[2025-12-17 19:08:25] 2025-12-18 00:07:22,975 | INFO     | left removable region: 20
[2025-12-17 19:08:25] 2025-12-18 00:07:22,975 | INFO     | sum of square deviations: 147126479.5
[2025-12-17 19:08:25] 2025-12-18 00:07:22,975 | INFO     | sum of deviations: -3300705486.0
[2025-12-17 19:08:25] 2025-12-18 00:07:22,976 | INFO     | mean x: 1766013657.5
[2025-12-17 19:08:25] 2025-12-18 00:07:22,976 | INFO     | mean y: 2532838.871794872
[2025-12-17 19:08:25] 2025-12-18 00:07:22,976 | INFO     | intersect: 39622124006.08364
[2025-12-17 19:08:25] 2025-12-18 00:07:22,976 | INFO     | chi2: 0.005876714820507096
[2025-12-17 19:08:25] 2025-12-18 00:07:22,976 | INFO     | current memory leak: -22.43 B/s (using 78 data points, chi2=0.01)
[2025-12-17 19:08:25] 2025-12-18 00:07:22,977 | INFO     | could have reported an average CPU frequency of 2643 MHz (7 samples)
[2025-12-17 19:08:25] 2025-12-18 00:07:22,977 | INFO     | ..............................
[2025-12-17 19:08:25] 2025-12-18 00:07:22,977 | INFO     | . Timing measurements:
[2025-12-17 19:08:25] 2025-12-18 00:07:22,977 | INFO     | . get job = 0 s
[2025-12-17 19:08:25] 2025-12-18 00:07:22,977 | INFO     | . initial setup = 2 s
[2025-12-17 19:08:25] 2025-12-18 00:07:22,977 | INFO     | . payload setup = 3 s
[2025-12-17 19:08:25] 2025-12-18 00:07:22,977 | INFO     | . stage-in = 0 s
[2025-12-17 19:08:25] 2025-12-18 00:07:22,978 | INFO     | . payload execution = 6345 s
[2025-12-17 19:08:25] 2025-12-18 00:07:22,978 | INFO     | . stage-out = 0 s
[2025-12-17 19:08:25] 2025-12-18 00:07:22,978 | INFO     | . log creation = 0 s
[2025-12-17 19:08:25] 2025-12-18 00:07:22,978 | INFO     | ..............................
[2025-12-17 19:08:25] 2025-12-18 00:07:23,051 | INFO     | 
[2025-12-17 19:08:25] 2025-12-18 00:07:23,051 | INFO     | job summary report
[2025-12-17 19:08:25] 2025-12-18 00:07:23,051 | INFO     | --------------------------------------------------
[2025-12-17 19:08:25] 2025-12-18 00:07:23,051 | INFO     | PanDA job id: 6932560638
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | task id: 47886933
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | errors: (none)
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | pilot state: finished 
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | transexitcode: 0
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | exeerrorcode: 0
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | exeerrordiag: 
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | exitcode: 0
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | exitmsg: OK
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | cpuconsumptiontime: 47187 s
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | nevents: 400
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | neventsw: 0
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | pid: 2011710
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | pgrp: 2011710
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | corecount: 8
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | event service: False
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | sizes: {0: 2283965, 3: 2284227, 11: 2284255, 6353: 2311301, 6354: 2320299, 6355: 2320355, 6361: 2320677}
[2025-12-17 19:08:25] 2025-12-18 00:07:23,052 | INFO     | --------------------------------------------------
[2025-12-17 19:08:25] 2025-12-18 00:07:23,053 | INFO     | 
[2025-12-17 19:08:25] 2025-12-18 00:07:23,053 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 19:08:25] 2025-12-18 00:07:23,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 19:08:25] 2025-12-18 00:07:23,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,070 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 19:08:25] 2025-12-18 00:07:23,070 | INFO     | job 6932560638 has completed (purged errors)
[2025-12-17 19:08:25] 2025-12-18 00:07:23,070 | INFO     | overall cleanup function is called
[2025-12-17 19:08:25] 2025-12-18 00:07:23,287 | INFO     | PID=1993475 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-17 19:08:25] 2025-12-18 00:07:23,287 | INFO     | .. there are 5 such processes running
[2025-12-17 19:08:25] 2025-12-18 00:07:24,077 | INFO     | --- collectZombieJob: --- 10, [2011710]
[2025-12-17 19:08:25] 2025-12-18 00:07:24,078 | INFO     | zombie collector waiting for pid 2011710
[2025-12-17 19:08:25] 2025-12-18 00:07:24,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 19:08:25] 2025-12-18 00:07:24,078 | INFO     | collected zombie processes
[2025-12-17 19:08:25] 2025-12-18 00:07:24,078 | INFO     | will attempt to kill all subprocesses of pid=2011710
[2025-12-17 19:08:25] 2025-12-18 00:07:24,305 | INFO     | process IDs to be killed: [2011710] (in reverse order)
[2025-12-17 19:08:25] 2025-12-18 00:07:24,369 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 19:08:25] 2025-12-18 00:07:24,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 19:08:25] 2025-12-18 00:07:24,376 | INFO     | did not find any defunct processes belonging to 2011710
[2025-12-17 19:08:25] 2025-12-18 00:07:24,382 | INFO     | did not find any defunct processes belonging to 2011710
[2025-12-17 19:08:25] 2025-12-18 00:07:24,382 | INFO     | ready for new job
[2025-12-17 19:08:25] 2025-12-18 00:07:24,382 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 19:08:25] 2025-12-18 00:07:24,384 | INFO     | ***************************************
[2025-12-17 19:08:25] 2025-12-18 00:07:24,384 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 19:08:25] 2025-12-18 00:07:24,384 | INFO     | ***************************************
[2025-12-17 19:08:25] 2025-12-18 00:07:24,384 | INFO     | 
[2025-12-17 19:08:25] 2025-12-18 00:07:24,386 | INFO     | architecture information:
[2025-12-17 19:08:25] 2025-12-18 00:07:24,387 | INFO     | executing command: cat /etc/os-release
[2025-12-17 19:08:25] 2025-12-18 00:07:24,400 | INFO     | cat /etc/os-release:
[2025-12-17 19:08:25] NAME="CentOS Linux"
[2025-12-17 19:08:25] VERSION="7 (Core)"
[2025-12-17 19:08:25] ID="centos"
[2025-12-17 19:08:25] ID_LIKE="rhel fedora"
[2025-12-17 19:08:25] VERSION_ID="7"
[2025-12-17 19:08:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 19:08:25] ANSI_COLOR="0;31"
[2025-12-17 19:08:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 19:08:25] HOME_URL="https://www.centos.org/"
[2025-12-17 19:08:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 19:08:25] 
[2025-12-17 19:08:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 19:08:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 19:08:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 19:08:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 19:08:25] 
[2025-12-17 19:08:25] 2025-12-18 00:07:24,400 | INFO     | ***************************************
[2025-12-17 19:08:25] 2025-12-18 00:07:24,903 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 19:08:25] 2025-12-18 00:07:24,919 | INFO     | sufficient remaining disk space (51373932544 B)
[2025-12-17 19:08:25] 2025-12-18 00:07:24,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 19:08:25] 2025-12-18 00:07:24,920 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 19:08:25] 2025-12-18 00:07:24,920 | INFO     | update_server=False
[2025-12-17 19:08:25] 2025-12-18 00:07:24,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 19:08:25] 2025-12-18 00:07:24,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 19:08:25] 2025-12-18 00:07:24,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 19:08:25] 2025-12-18 00:07:24,921 | INFO     | aborting loop
[2025-12-17 19:08:25] 2025-12-18 00:07:25,303 | INFO     | all payload control threads have been joined
[2025-12-17 19:08:25] 2025-12-18 00:07:25,362 | INFO     | all data control threads have been joined
[2025-12-17 19:08:25] 2025-12-18 00:07:25,701 | INFO     | all job control threads have been joined
[2025-12-17 19:08:25] 2025-12-18 00:07:25,925 | INFO     | [job] retrieve thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:25,926 | INFO     | [job] job monitor thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:25,926 | INFO     | [job] queue monitor thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:26,119 | INFO     | [job] validate thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:26,309 | INFO     | [payload] control thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:26,367 | INFO     | [data] control thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:26,374 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:26,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 19:08:25] 2025-12-18 00:07:26,554 | INFO     | [payload] failed_post thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:26,641 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:26,677 | INFO     | [data] copytool_in thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:26,706 | INFO     | [job] control thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:26,800 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:27,174 | INFO     | [payload] validate_post thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:27,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 19:08:25] 2025-12-18 00:07:28,390 | INFO     | [data] copytool_out thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:31,567 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:35,321 | INFO     | job.realtimelogging is not enabled
[2025-12-17 19:08:25] 2025-12-18 00:07:36,327 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 19:08:25] 2025-12-18 00:07:55,633 | INFO     | PID=1993475 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 19:08:25] 2025-12-18 00:07:55,633 | INFO     | .. there are 5 such processes running
[2025-12-17 19:08:25] 2025-12-18 00:07:55,633 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 19:08:25] 2025-12-18 00:07:55,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 19:08:25] 2025-12-18 00:07:55,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 19:08:25] 2025-12-18 00:08:19,091 | INFO     | [monitor] cgroup control has ended
[2025-12-17 19:08:25] 2025-12-18 00:08:20,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639225276224)>', '<ExcThread(monitor, started 139638505203456)>']
[2025-12-17 19:08:25] 2025-12-18 00:08:20,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 19:08:25] 2025-12-18 00:08:20,741 | INFO     | [monitor] control thread has ended
[2025-12-17 19:08:25] 2025-12-18 00:08:25,166 | INFO     | all workflow threads have been joined
[2025-12-17 19:08:25] 2025-12-18 00:08:25,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 19:08:25] 2025-12-18 00:08:25,166 | INFO     | traces error code: 0
[2025-12-17 19:08:25] 2025-12-18 00:08:25,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 19:08:25] 2025-12-18 00:08:25,272 [wrapper] ==== pilot stdout END ====
[2025-12-17 19:08:25] 2025-12-18 00:08:25,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 19:08:25] 2025-12-18 00:08:25,278 [wrapper] pilotpid: 1993475
[2025-12-17 19:08:25] 2025-12-18 00:08:25,280 [wrapper] Pilot exit status: 0
[2025-12-17 19:08:25] 2025-12-18 00:08:25,289 [wrapper] pandaids: 6932560638
[2025-12-17 19:08:25] 2025-12-18 00:08:25,329 [wrapper] cleanup supervisor_pilot 2195075 1993476
[2025-12-17 19:08:25] 2025-12-18 00:08:25,332 [wrapper] Test setup, not cleaning
[2025-12-17 19:08:25] 2025-12-18 00:08:25,335 [wrapper] apfmon messages muted
[2025-12-17 19:08:25] 2025-12-18 00:08:25,338 [wrapper] ==== wrapper stdout END ====
[2025-12-17 19:08:25] 2025-12-18 00:08:25,340 [wrapper] ==== wrapper stderr END ====
[2025-12-17 19:08:25]  *** Error codes and diagnostics ***
[2025-12-17 19:08:25]     "exeErrorCode": 0,
[2025-12-17 19:08:25]     "exeErrorDiag": "",
[2025-12-17 19:08:25]     "pilotErrorCode": 0,
[2025-12-17 19:08:25]     "pilotErrorDiag": "",
[2025-12-17 19:08:25]  *** Listing of results directory ***
[2025-12-17 19:08:25] total 338404
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 12:11 queuedata.json
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 12:11 pilot3.tar.gz
[2025-12-17 19:08:25] -rwx------. 1 boincer umatlas     36322 Dec 17 12:12 runpilot2-wrapper.sh
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas       100 Dec 17 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 19:08:25] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 17:21 run_atlas
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas       105 Dec 17 17:21 job.xml
[2025-12-17 19:08:25] -rw-r--r--. 2 boincer umatlas 192412919 Dec 17 17:21 EVNT.47886929._000450.pool.root.1
[2025-12-17 19:08:25] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 17:21 start_atlas.sh
[2025-12-17 19:08:25] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 17:21 shared
[2025-12-17 19:08:25] -rw-r--r--. 2 boincer umatlas    592399 Dec 17 17:21 input.tar.gz
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas         0 Dec 17 17:21 boinc_lockfile
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas      2513 Dec 17 17:21 pandaJob.out
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas        57 Dec 17 17:21 setup.sh.local
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas    988134 Dec 17 17:21 agis_schedconf.cvmfs.json
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas   1516240 Dec 17 17:21 agis_ddmendpoints.agis.ALL.json
[2025-12-17 19:08:25] drwx------. 5 boincer umatlas      4096 Dec 17 17:21 pilot3
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas      6663 Dec 17 19:03 init_data.xml
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas 147655642 Dec 17 19:06 HITS.47886933._010134.pool.root.1
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas       530 Dec 17 19:06 boinc_task_state.xml
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas      1033 Dec 17 19:07 memory_monitor_summary.json
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas        95 Dec 17 19:07 pilot_heartbeat.json
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas    347902 Dec 17 19:07 log.47886933._010134.job.log.tgz.1
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas      7812 Dec 17 19:07 heartbeat.json
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 19:08 boinc_mmap_file
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas        27 Dec 17 19:08 wrapper_checkpoint.txt
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas      4895 Dec 17 19:08 pilotlog.txt
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas    921945 Dec 17 19:08 log.47886933._010134.job.log.1
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas       357 Dec 17 19:08 output.list
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas       620 Dec 17 19:08 runtime_log
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas   1290240 Dec 17 19:08 result.tar.gz
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas      9342 Dec 17 19:08 runtime_log.err
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas       652 Dec 17 19:08 QYQMDmEGAq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmORcKDmDs9FFo.diag
[2025-12-17 19:08:25] -rw-r--r--. 1 boincer umatlas     21411 Dec 17 19:08 stderr.txt
[2025-12-17 19:08:25] HITS file was successfully produced:
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas 147655642 Dec 17 19:06 shared/HITS.pool.root.1
[2025-12-17 19:08:25]  *** Contents of shared directory: ***
[2025-12-17 19:08:25] total 333964
[2025-12-17 19:08:25] -rw-r--r--. 2 boincer umatlas 192412919 Dec 17 17:21 ATLAS.root_0
[2025-12-17 19:08:25] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 17:21 start_atlas.sh
[2025-12-17 19:08:25] -rw-r--r--. 2 boincer umatlas    592399 Dec 17 17:21 input.tar.gz
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas 147655642 Dec 17 19:06 HITS.pool.root.1
[2025-12-17 19:08:25] -rw-------. 1 boincer umatlas   1290240 Dec 17 19:08 result.tar.gz
19:08:27 (1989350): run_atlas exited; CPU time 47345.255290
19:08:27 (1989350): called boinc_finish(0)

</stderr_txt>
]]>

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