Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:28:04 (19173): wrapper (7.7.26015): starting
16:28:04 (19173): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 16:28:04] Arguments: --nthreads 8
[2025-12-17 16:28:04] Threads: 8
[2025-12-17 16:28:04] Checking for CVMFS
[2025-12-17 16:28:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 16:28:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 16:28:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 16:28:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 16:28:05] 2.11.2.0 18601 132646 139556 154123 2 59 10393075 18432000 1833 130560 0 93638993 99.985 4934249 31733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 16:28:05] CVMFS is ok
[2025-12-17 16:28:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 16:28:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 16:28:05] Further information can be found at the LHC@home message board.
[2025-12-17 16:28:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 16:28:05] Checking for apptainer binary...
[2025-12-17 16:28:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 16:28:05] Running /usr/bin/apptainer --version
[2025-12-17 16:28:05] apptainer version 1.3.2-1.el7
[2025-12-17 16:28:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 16:28:06] c-206-13.aglt2.org
[2025-12-17 16:28:06] apptainer works
[2025-12-17 16:28:06] Set ATHENA_PROC_NUMBER=8
[2025-12-17 16:28:06] Set ATHENA_CORE_NUMBER=8
[2025-12-17 16:28:06] Starting ATLAS job with PandaID=6932535819
[2025-12-17 16:28:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 20:11:01]  *** The last 200 lines of the pilot log: ***
[2025-12-17 20:11:01] 2025-12-18 01:10:25,841 | INFO     | executing command: lscpu
[2025-12-17 20:11:01] 2025-12-18 01:10:25,868 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 20:11:01] 2025-12-18 01:10:26,275 | INFO     | time since job start (13329s) is within the limit (174528.0s)
[2025-12-17 20:11:01] 2025-12-18 01:10:27,188 | INFO     | monitor loop #957: job 0:6932535819 is in state 'finished'
[2025-12-17 20:11:01] 2025-12-18 01:10:27,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 20:11:01] 2025-12-18 01:10:28,280 | INFO     | time since job start (13331s) is within the limit (174528.0s)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,690 | INFO     | monitor loop #958: job 0:6932535819 is in state 'finished'
[2025-12-17 20:11:01] 2025-12-18 01:10:29,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,810 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-17 20:11:01] 2025-12-18 01:10:29,815 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1734.5833333333333
[2025-12-17 20:11:01] 2025-12-18 01:10:29,820 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6932535819/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,820 | INFO     | extracted standard info from prmon json
[2025-12-17 20:11:01] 2025-12-18 01:10:29,821 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 20:11:01] 2025-12-18 01:10:29,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 20:11:01] 2025-12-18 01:10:29,821 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 20:11:01] 2025-12-18 01:10:29,821 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 20:11:01] 2025-12-18 01:10:29,824 | INFO     | fitting pss+swap vs Time
[2025-12-17 20:11:01] 2025-12-18 01:10:29,825 | INFO     | sum of square deviations: 3212467674.5
[2025-12-17 20:11:01] 2025-12-18 01:10:29,826 | INFO     | sum of deviations: 179833245.99999523
[2025-12-17 20:11:01] 2025-12-18 01:10:29,826 | INFO     | mean x: 1766013540.5
[2025-12-17 20:11:01] 2025-12-18 01:10:29,826 | INFO     | mean y: 2544263.2018348626
[2025-12-17 20:11:01] 2025-12-18 01:10:29,826 | INFO     | intersect: -96316793.047545
[2025-12-17 20:11:01] 2025-12-18 01:10:29,827 | INFO     | chi2: 1.4938548311809556
[2025-12-17 20:11:01] 2025-12-18 01:10:29,827 | INFO     | sum of square deviations: 2996454322.0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,828 | INFO     | sum of deviations: 118951525.00001937
[2025-12-17 20:11:01] 2025-12-18 01:10:29,828 | INFO     | mean x: 1766013388.0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,829 | INFO     | mean y: 2544220.591549296
[2025-12-17 20:11:01] 2025-12-18 01:10:29,829 | INFO     | intersect: -67561965.95390038
[2025-12-17 20:11:01] 2025-12-18 01:10:29,829 | INFO     | chi2: 1.493771198978509
[2025-12-17 20:11:01] 2025-12-18 01:10:29,829 | INFO     | current chi2=1.493771198978509 (change=0.00559841563591262 %)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,829 | INFO     | right removable region: 212
[2025-12-17 20:11:01] 2025-12-18 01:10:29,830 | INFO     | sum of square deviations: 2996454322.0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,831 | INFO     | sum of deviations: -32335025546.0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,831 | INFO     | mean x: 1766013693.0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,831 | INFO     | mean y: 2566976.723004695
[2025-12-17 20:11:01] 2025-12-18 01:10:29,831 | INFO     | intersect: 19059789861.277557
[2025-12-17 20:11:01] 2025-12-18 01:10:29,831 | INFO     | chi2: 0.11069751286922956
[2025-12-17 20:11:01] 2025-12-18 01:10:29,832 | INFO     | current chi2=0.11069751286922956 (change=92.58980788771032 %)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,832 | INFO     | sum of square deviations: 2790348132.0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,833 | INFO     | sum of deviations: -29843777616.000004
[2025-12-17 20:11:01] 2025-12-18 01:10:29,833 | INFO     | mean x: 1766013845.5
[2025-12-17 20:11:01] 2025-12-18 01:10:29,833 | INFO     | mean y: 2565099.3173076925
[2025-12-17 20:11:01] 2025-12-18 01:10:29,833 | INFO     | intersect: 18890718827.326393
[2025-12-17 20:11:01] 2025-12-18 01:10:29,834 | INFO     | chi2: 0.09952426298343374
[2025-12-17 20:11:01] 2025-12-18 01:10:29,834 | INFO     | current chi2=0.09952426298343374 (change=10.093496769882384 %)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,834 | INFO     | left removable region: 20
[2025-12-17 20:11:01] 2025-12-18 01:10:29,834 | INFO     | sum of square deviations: 2194675568.0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,835 | INFO     | sum of deviations: -15923598905.0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,835 | INFO     | mean x: 1766013967.5
[2025-12-17 20:11:01] 2025-12-18 01:10:29,835 | INFO     | mean y: 2554516.03125
[2025-12-17 20:11:01] 2025-12-18 01:10:29,836 | INFO     | intersect: 12815973724.37672
[2025-12-17 20:11:01] 2025-12-18 01:10:29,836 | INFO     | chi2: 0.05865844515296195
[2025-12-17 20:11:01] 2025-12-18 01:10:29,836 | INFO     | current memory leak: -7.26 B/s (using 192 data points, chi2=0.06)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,836 | INFO     | could have reported an average CPU frequency of 2522 MHz (11 samples)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,836 | INFO     | ..............................
[2025-12-17 20:11:01] 2025-12-18 01:10:29,837 | INFO     | . Timing measurements:
[2025-12-17 20:11:01] 2025-12-18 01:10:29,837 | INFO     | . get job = 0 s
[2025-12-17 20:11:01] 2025-12-18 01:10:29,837 | INFO     | . initial setup = 2 s
[2025-12-17 20:11:01] 2025-12-18 01:10:29,837 | INFO     | . payload setup = 4 s
[2025-12-17 20:11:01] 2025-12-18 01:10:29,837 | INFO     | . stage-in = 0 s
[2025-12-17 20:11:01] 2025-12-18 01:10:29,837 | INFO     | . payload execution = 13297 s
[2025-12-17 20:11:01] 2025-12-18 01:10:29,837 | INFO     | . stage-out = 1 s
[2025-12-17 20:11:01] 2025-12-18 01:10:29,837 | INFO     | . log creation = 0 s
[2025-12-17 20:11:01] 2025-12-18 01:10:29,837 | INFO     | ..............................
[2025-12-17 20:11:01] 2025-12-18 01:10:29,918 | INFO     | 
[2025-12-17 20:11:01] 2025-12-18 01:10:29,918 | INFO     | job summary report
[2025-12-17 20:11:01] 2025-12-18 01:10:29,918 | INFO     | --------------------------------------------------
[2025-12-17 20:11:01] 2025-12-18 01:10:29,918 | INFO     | PanDA job id: 6932535819
[2025-12-17 20:11:01] 2025-12-18 01:10:29,919 | INFO     | task id: 47929047
[2025-12-17 20:11:01] 2025-12-18 01:10:29,919 | INFO     | errors: (none)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,919 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 20:11:01] 2025-12-18 01:10:29,919 | INFO     | pilot state: finished 
[2025-12-17 20:11:01] 2025-12-18 01:10:29,919 | INFO     | transexitcode: 0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,919 | INFO     | exeerrorcode: 0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,920 | INFO     | exeerrordiag: 
[2025-12-17 20:11:01] 2025-12-18 01:10:29,920 | INFO     | exitcode: 0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,920 | INFO     | exitmsg: OK
[2025-12-17 20:11:01] 2025-12-18 01:10:29,920 | INFO     | cpuconsumptiontime: 102094 s
[2025-12-17 20:11:01] 2025-12-18 01:10:29,920 | INFO     | nevents: 400
[2025-12-17 20:11:01] 2025-12-18 01:10:29,920 | INFO     | neventsw: 0
[2025-12-17 20:11:01] 2025-12-18 01:10:29,920 | INFO     | pid: 31285
[2025-12-17 20:11:01] 2025-12-18 01:10:29,921 | INFO     | pgrp: 31285
[2025-12-17 20:11:01] 2025-12-18 01:10:29,921 | INFO     | corecount: 8
[2025-12-17 20:11:01] 2025-12-18 01:10:29,921 | INFO     | event service: False
[2025-12-17 20:11:01] 2025-12-18 01:10:29,921 | INFO     | sizes: {0: 2283243, 1: 2284099, 2: 2284099, 5: 2284389, 13: 2284445, 13306: 2314678, 13308: 2323676, 13312: 2323732, 13317: 2323926}
[2025-12-17 20:11:01] 2025-12-18 01:10:29,921 | INFO     | --------------------------------------------------
[2025-12-17 20:11:01] 2025-12-18 01:10:29,921 | INFO     | 
[2025-12-17 20:11:01] 2025-12-18 01:10:29,921 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-17 20:11:01] 2025-12-18 01:10:29,940 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,940 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,941 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,941 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,941 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,941 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,941 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,941 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,941 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,942 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,942 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,942 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,942 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,942 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,943 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,943 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,943 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,943 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,943 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 20:11:01] 2025-12-18 01:10:29,943 | INFO     | job 6932535819 has completed (purged errors)
[2025-12-17 20:11:01] 2025-12-18 01:10:29,944 | INFO     | overall cleanup function is called
[2025-12-17 20:11:01] 2025-12-18 01:10:30,952 | INFO     | --- collectZombieJob: --- 10, [31285]
[2025-12-17 20:11:01] 2025-12-18 01:10:30,952 | INFO     | zombie collector waiting for pid 31285
[2025-12-17 20:11:01] 2025-12-18 01:10:30,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 20:11:01] 2025-12-18 01:10:30,952 | INFO     | collected zombie processes
[2025-12-17 20:11:01] 2025-12-18 01:10:30,952 | INFO     | will attempt to kill all subprocesses of pid=31285
[2025-12-17 20:11:01] 2025-12-18 01:10:31,067 | INFO     | process IDs to be killed: [31285] (in reverse order)
[2025-12-17 20:11:01] 2025-12-18 01:10:31,112 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 20:11:01] 2025-12-18 01:10:31,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 20:11:01] 2025-12-18 01:10:31,115 | INFO     | did not find any defunct processes belonging to 31285
[2025-12-17 20:11:01] 2025-12-18 01:10:31,118 | INFO     | did not find any defunct processes belonging to 31285
[2025-12-17 20:11:01] 2025-12-18 01:10:31,119 | INFO     | ready for new job
[2025-12-17 20:11:01] 2025-12-18 01:10:31,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 20:11:01] 2025-12-18 01:10:31,121 | INFO     | ***************************************
[2025-12-17 20:11:01] 2025-12-18 01:10:31,121 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 20:11:01] 2025-12-18 01:10:31,121 | INFO     | ***************************************
[2025-12-17 20:11:01] 2025-12-18 01:10:31,121 | INFO     | 
[2025-12-17 20:11:01] 2025-12-18 01:10:31,122 | INFO     | architecture information:
[2025-12-17 20:11:01] 2025-12-18 01:10:31,122 | INFO     | executing command: cat /etc/os-release
[2025-12-17 20:11:01] 2025-12-18 01:10:31,134 | INFO     | cat /etc/os-release:
[2025-12-17 20:11:01] NAME="CentOS Linux"
[2025-12-17 20:11:01] VERSION="7 (Core)"
[2025-12-17 20:11:01] ID="centos"
[2025-12-17 20:11:01] ID_LIKE="rhel fedora"
[2025-12-17 20:11:01] VERSION_ID="7"
[2025-12-17 20:11:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 20:11:01] ANSI_COLOR="0;31"
[2025-12-17 20:11:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 20:11:01] HOME_URL="https://www.centos.org/"
[2025-12-17 20:11:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 20:11:01] 
[2025-12-17 20:11:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 20:11:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 20:11:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 20:11:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 20:11:01] 
[2025-12-17 20:11:01] 2025-12-18 01:10:31,134 | INFO     | ***************************************
[2025-12-17 20:11:01] 2025-12-18 01:10:31,637 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-17 20:11:01] 2025-12-18 01:10:31,654 | INFO     | sufficient remaining disk space (28203548672 B)
[2025-12-17 20:11:01] 2025-12-18 01:10:31,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 20:11:01] 2025-12-18 01:10:31,655 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 20:11:01] 2025-12-18 01:10:31,655 | INFO     | update_server=False
[2025-12-17 20:11:01] 2025-12-18 01:10:31,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 20:11:01] 2025-12-18 01:10:31,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 20:11:01] 2025-12-18 01:10:31,656 | INFO     | aborting loop
[2025-12-17 20:11:01] 2025-12-18 01:10:31,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 20:11:01] 2025-12-18 01:10:31,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 20:11:01] 2025-12-18 01:10:31,917 | INFO     | all data control threads have been joined
[2025-12-17 20:11:01] 2025-12-18 01:10:32,632 | INFO     | all job control threads have been joined
[2025-12-17 20:11:01] 2025-12-18 01:10:32,661 | INFO     | [job] job monitor thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:32,661 | INFO     | [job] retrieve thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:32,662 | INFO     | [job] queue monitor thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:32,923 | INFO     | [data] control thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:32,926 | INFO     | [payload] validate_post thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:33,115 | INFO     | all payload control threads have been joined
[2025-12-17 20:11:01] 2025-12-18 01:10:33,120 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:33,238 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:33,637 | INFO     | [job] control thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:33,659 | INFO     | [data] copytool_out thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:33,706 | INFO     | [data] copytool_in thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:33,726 | INFO     | [job] validate thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:33,758 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:33,924 | INFO     | [payload] failed_post thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:34,120 | INFO     | [payload] control thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:35,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 20:11:01] 2025-12-18 01:10:38,717 | INFO     | [monitor] cgroup control has ended
[2025-12-17 20:11:01] 2025-12-18 01:10:39,109 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:42,348 | INFO     | job.realtimelogging is not enabled
[2025-12-17 20:11:01] 2025-12-18 01:10:43,353 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 20:11:01] 2025-12-18 01:10:45,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762749511488)>', '<ExcThread(monitor, started 139762161661696)>']
[2025-12-17 20:11:01] 2025-12-18 01:10:50,327 | INFO     | all workflow threads have been joined
[2025-12-17 20:11:01] 2025-12-18 01:10:50,328 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 20:11:01] 2025-12-18 01:10:50,328 | INFO     | traces error code: 0
[2025-12-17 20:11:01] 2025-12-18 01:10:50,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 20:11:01] 2025-12-18 01:11:01,485 | INFO     | PID=24858 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 20:11:01] 2025-12-18 01:11:01,485 | INFO     | .. there are 2 such processes running
[2025-12-17 20:11:01] 2025-12-18 01:11:01,486 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 20:11:01] 2025-12-18 01:11:01,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 20:11:01] 2025-12-18 01:11:01,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 20:11:01] 2025-12-18 01:11:01,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 20:11:01] 2025-12-18 01:11:01,486 | INFO     | [monitor] control thread has ended
[2025-12-17 20:11:01] 2025-12-18 01:11:01,570 [wrapper] ==== pilot stdout END ====
[2025-12-17 20:11:01] 2025-12-18 01:11:01,573 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 20:11:01] 2025-12-18 01:11:01,577 [wrapper] pilotpid: 24858
[2025-12-17 20:11:01] 2025-12-18 01:11:01,581 [wrapper] Pilot exit status: 0
[2025-12-17 20:11:01] 2025-12-18 01:11:01,592 [wrapper] pandaids: 6932535819
[2025-12-17 20:11:01] 2025-12-18 01:11:01,631 [wrapper] cleanup supervisor_pilot 20900 24859
[2025-12-17 20:11:01] 2025-12-18 01:11:01,635 [wrapper] Test setup, not cleaning
[2025-12-17 20:11:01] 2025-12-18 01:11:01,638 [wrapper] apfmon messages muted
[2025-12-17 20:11:01] 2025-12-18 01:11:01,642 [wrapper] ==== wrapper stdout END ====
[2025-12-17 20:11:01] 2025-12-18 01:11:01,645 [wrapper] ==== wrapper stderr END ====
[2025-12-17 20:11:01]  *** Error codes and diagnostics ***
[2025-12-17 20:11:01]     "exeErrorCode": 0,
[2025-12-17 20:11:01]     "exeErrorDiag": "",
[2025-12-17 20:11:01]     "pilotErrorCode": 0,
[2025-12-17 20:11:01]     "pilotErrorDiag": "",
[2025-12-17 20:11:01]  *** Listing of results directory ***
[2025-12-17 20:11:01] total 521468
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas      5112 Dec 17 12:11 queuedata.json
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas    579449 Dec 17 12:11 pilot3.tar.gz
[2025-12-17 20:11:01] -rwx------ 1 boincer umatlas     36322 Dec 17 12:11 runpilot2-wrapper.sh
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas       100 Dec 17 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 20:11:01] -rwxr-xr-x 1 boincer umatlas      7986 Dec 17 16:28 run_atlas
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas       105 Dec 17 16:28 job.xml
[2025-12-17 20:11:01] -rw-r--r-- 2 boincer umatlas 293103332 Dec 17 16:28 EVNT.47929045._000024.pool.root.1
[2025-12-17 20:11:01] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 16:28 start_atlas.sh
[2025-12-17 20:11:01] drwxrwx--x 2 boincer umatlas      4096 Dec 17 16:28 shared
[2025-12-17 20:11:01] -rw-r--r-- 2 boincer umatlas    592413 Dec 17 16:28 input.tar.gz
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas         0 Dec 17 16:28 boinc_lockfile
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas      2590 Dec 17 16:28 pandaJob.out
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas        57 Dec 17 16:28 setup.sh.local
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas    988142 Dec 17 16:28 agis_schedconf.cvmfs.json
[2025-12-17 20:11:01] drwx------ 5 boincer umatlas      4096 Dec 17 16:28 pilot3
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas      5952 Dec 17 20:04 init_data.xml
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas 232358409 Dec 17 20:09 HITS.47929047._000584.pool.root.1
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas        95 Dec 17 20:10 pilot_heartbeat.json
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas       532 Dec 17 20:10 boinc_task_state.xml
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas      1055 Dec 17 20:10 memory_monitor_summary.json
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas   1516240 Dec 17 20:10 agis_ddmendpoints.agis.ALL.json
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas    446098 Dec 17 20:10 log.47929047._000584.job.log.tgz.1
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas      7855 Dec 17 20:10 heartbeat.json
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas      8192 Dec 17 20:10 boinc_mmap_file
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas        29 Dec 17 20:10 wrapper_checkpoint.txt
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas       820 Dec 17 20:11 pilotlog.txt
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas   1858039 Dec 17 20:11 log.47929047._000584.job.log.1
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas       357 Dec 17 20:11 output.list
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas       620 Dec 17 20:11 runtime_log
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas   2324480 Dec 17 20:11 result.tar.gz
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas       663 Dec 17 20:11 wwJODm5EAq8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZmXKDm75BhHn.diag
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas      9343 Dec 17 20:11 runtime_log.err
[2025-12-17 20:11:01] -rw-r--r-- 1 boincer umatlas     21353 Dec 17 20:11 stderr.txt
[2025-12-17 20:11:01] HITS file was successfully produced:
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas 232358409 Dec 17 20:09 shared/HITS.pool.root.1
[2025-12-17 20:11:01]  *** Contents of shared directory: ***
[2025-12-17 20:11:01] total 516024
[2025-12-17 20:11:01] -rw-r--r-- 2 boincer umatlas 293103332 Dec 17 16:28 ATLAS.root_0
[2025-12-17 20:11:01] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 16:28 start_atlas.sh
[2025-12-17 20:11:01] -rw-r--r-- 2 boincer umatlas    592413 Dec 17 16:28 input.tar.gz
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas 232358409 Dec 17 20:09 HITS.pool.root.1
[2025-12-17 20:11:01] -rw------- 1 boincer umatlas   2324480 Dec 17 20:11 result.tar.gz
20:11:03 (19173): run_atlas exited; CPU time 102245.679914
20:11:03 (19173): called boinc_finish(0)

</stderr_txt>
]]>

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