Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:48:14 (1797247): wrapper (7.7.26015): starting
10:48:14 (1797247): wrapper: running run_atlas (--nthreads 2)
[2025-12-18 10:48:14] Arguments: --nthreads 2
[2025-12-18 10:48:14] Threads: 2
[2025-12-18 10:48:14] Checking for CVMFS
[2025-12-18 10:48:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 10:48:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 10:48:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 10:48:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 10:48:15] 2.9.2.0 357904 7477 65044 154145 2 56 28170077 36864001 0 130560 0 3788406 99.987 269183 15467 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 10:48:15] CVMFS is ok
[2025-12-18 10:48:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 10:48:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 10:48:15] Further information can be found at the LHC@home message board.
[2025-12-18 10:48:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 10:48:15] Checking for apptainer binary...
[2025-12-18 10:48:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 10:48:15] Running /usr/bin/apptainer --version
[2025-12-18 10:48:15] apptainer version 1.4.1-1.1
[2025-12-18 10:48:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 10:48:15] atlasA229
[2025-12-18 10:48:15] apptainer works
[2025-12-18 10:48:15] Set ATHENA_PROC_NUMBER=2
[2025-12-18 10:48:15] Set ATHENA_CORE_NUMBER=2
[2025-12-18 10:48:15] Starting ATLAS job with PandaID=6931735400
[2025-12-18 10:48:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 13:02:45]  *** The last 200 lines of the pilot log: ***
[2025-12-18 13:02:45] VERSION_ID="7"
[2025-12-18 13:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 13:02:45] ANSI_COLOR="0;31"
[2025-12-18 13:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 13:02:45] HOME_URL="https://www.centos.org/"
[2025-12-18 13:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 13:02:45] 
[2025-12-18 13:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 13:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 13:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 13:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 13:02:45] 
[2025-12-18 13:02:45] 2025-12-18 12:01:49,927 | INFO     | ***************************************
[2025-12-18 13:02:45] 2025-12-18 12:01:50,430 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-18 13:02:45] 2025-12-18 12:01:50,442 | INFO     | sufficient remaining disk space (332588384256 B)
[2025-12-18 13:02:45] 2025-12-18 12:01:50,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 13:02:45] 2025-12-18 12:01:50,442 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 13:02:45] 2025-12-18 12:01:50,442 | INFO     | update_server=False
[2025-12-18 13:02:45] 2025-12-18 12:01:50,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 13:02:45] 2025-12-18 12:01:50,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 13:02:45] 2025-12-18 12:01:50,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 13:02:45] 2025-12-18 12:01:50,443 | INFO     | aborting loop
[2025-12-18 13:02:45] 2025-12-18 12:01:51,061 | INFO     | all payload control threads have been joined
[2025-12-18 13:02:45] 2025-12-18 12:01:51,187 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 13:02:45] 2025-12-18 12:01:51,445 | INFO     | [job] job monitor thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:51,448 | INFO     | [job] retrieve thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:51,448 | INFO     | [job] queue monitor thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:51,482 | INFO     | all data control threads have been joined
[2025-12-18 13:02:45] 2025-12-18 12:01:51,575 | INFO     | [job] validate thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:51,613 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:51,713 | INFO     | [payload] validate_post thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:51,728 | INFO     | all job control threads have been joined
[2025-12-18 13:02:45] 2025-12-18 12:01:51,817 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:51,926 | INFO     | [data] copytool_in thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:52,067 | INFO     | [payload] control thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:52,123 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:52,488 | INFO     | [data] control thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:52,734 | INFO     | [job] control thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:52,797 | INFO     | [payload] failed_post thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:53,194 | INFO     | [data] copytool_out thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:01:53,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 13:02:45] 2025-12-18 12:01:57,216 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:02:01,359 | INFO     | job.realtimelogging is not enabled
[2025-12-18 13:02:45] 2025-12-18 12:02:02,365 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 13:02:45] 2025-12-18 12:02:20,511 | INFO     | PID=1800960 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 13:02:45] 2025-12-18 12:02:20,511 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 13:02:45] 2025-12-18 12:02:20,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 13:02:45] 2025-12-18 12:02:20,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 13:02:45] 2025-12-18 12:02:38,324 | INFO     | [monitor] cgroup control has ended
[2025-12-18 13:02:45] 2025-12-18 12:02:40,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694281951040)>', '<ExcThread(monitor, started 139693760943872)>']
[2025-12-18 13:02:45] 2025-12-18 12:02:40,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 13:02:45] 2025-12-18 12:02:40,619 | INFO     | [monitor] control thread has ended
[2025-12-18 13:02:45] 2025-12-18 12:02:45,326 | INFO     | all workflow threads have been joined
[2025-12-18 13:02:45] 2025-12-18 12:02:45,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 13:02:45] 2025-12-18 12:02:45,327 | INFO     | traces error code: 0
[2025-12-18 13:02:45] 2025-12-18 12:02:45,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 13:02:45] 2025-12-18 12:02:45,371 [wrapper] ==== pilot stdout END ====
[2025-12-18 13:02:45] 2025-12-18 12:02:45,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 13:02:45] 2025-12-18 12:02:45,376 [wrapper] pilotpid: 1800960
[2025-12-18 13:02:45] 2025-12-18 12:02:45,378 [wrapper] Pilot exit status: 0
[2025-12-18 13:02:45] 2025-12-18 12:02:45,383 [wrapper] pandaids: 6931735400
[2025-12-18 13:02:45] 2025-12-18 12:02:45,398 [wrapper] cleanup supervisor_pilot 1821596 1800961
[2025-12-18 13:02:45] 2025-12-18 12:02:45,400 [wrapper] Test setup, not cleaning
[2025-12-18 13:02:45] 2025-12-18 12:02:45,403 [wrapper] apfmon messages muted
[2025-12-18 13:02:45] 2025-12-18 12:02:45,405 [wrapper] ==== wrapper stdout END ====
[2025-12-18 13:02:45] 2025-12-18 12:02:45,408 [wrapper] ==== wrapper stderr END ====
[2025-12-18 13:02:45]  *** Error codes and diagnostics ***
[2025-12-18 13:02:45]     "exeErrorCode": 0,
[2025-12-18 13:02:45]     "exeErrorDiag": "",
[2025-12-18 13:02:45]     "pilotErrorCode": 0,
[2025-12-18 13:02:45]     "pilotErrorDiag": "",
[2025-12-18 13:02:45]  *** Listing of results directory ***
[2025-12-18 13:02:45] total 340620
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc    579449 Dec 17 02:05 pilot3.tar.gz
[2025-12-18 13:02:45] -rwx------ 1 boinc boinc     36322 Dec 17 02:06 runpilot2-wrapper.sh
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc      5112 Dec 17 02:07 queuedata.json
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc       100 Dec 18 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 13:02:45] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 10:48 run_atlas
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc       105 Dec 18 10:48 job.xml
[2025-12-18 13:02:45] -rw-r--r-- 2 boinc boinc 191719229 Dec 18 10:48 EVNT.47886929._000334.pool.root.1
[2025-12-18 13:02:45] -rw-r--r-- 2 boinc boinc    592398 Dec 18 10:48 input.tar.gz
[2025-12-18 13:02:45] -rw-r--r-- 2 boinc boinc     15847 Dec 18 10:48 start_atlas.sh
[2025-12-18 13:02:45] drwxrwx--x 2 boinc boinc      4096 Dec 18 10:48 shared
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc         0 Dec 18 10:48 boinc_setup_complete
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc      6207 Dec 18 10:48 init_data.xml
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc         0 Dec 18 10:48 boinc_lockfile
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc      2513 Dec 18 10:48 pandaJob.out
[2025-12-18 13:02:45] -rw------- 1 boinc boinc    988133 Dec 18 10:48 agis_schedconf.cvmfs.json
[2025-12-18 13:02:45] -rw------- 1 boinc boinc   1516240 Dec 18 10:48 agis_ddmendpoints.agis.ALL.json
[2025-12-18 13:02:45] drwx------ 5 boinc boinc      4096 Dec 18 10:48 pilot3
[2025-12-18 13:02:45] -rw------- 1 boinc boinc 150278327 Dec 18 13:01 HITS.47886933._008190.pool.root.1
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc       529 Dec 18 13:01 boinc_task_state.xml
[2025-12-18 13:02:45] -rw------- 1 boinc boinc      1013 Dec 18 13:01 memory_monitor_summary.json
[2025-12-18 13:02:45] -rw------- 1 boinc boinc    297391 Dec 18 13:01 log.47886933._008190.job.log.tgz.1
[2025-12-18 13:02:45] -rw------- 1 boinc boinc      7758 Dec 18 13:01 heartbeat.json
[2025-12-18 13:02:45] -rw------- 1 boinc boinc        95 Dec 18 13:02 pilot_heartbeat.json
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc      8192 Dec 18 13:02 boinc_mmap_file
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc        27 Dec 18 13:02 wrapper_checkpoint.txt
[2025-12-18 13:02:45] -rw------- 1 boinc boinc      4824 Dec 18 13:02 pilotlog.txt
[2025-12-18 13:02:45] -rw------- 1 boinc boinc   1148514 Dec 18 13:02 log.47886933._008190.job.log.1
[2025-12-18 13:02:45] -rw------- 1 boinc boinc       357 Dec 18 13:02 output.list
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc       620 Dec 18 13:02 runtime_log
[2025-12-18 13:02:45] -rw------- 1 boinc boinc   1464320 Dec 18 13:02 result.tar.gz
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc      8912 Dec 18 13:02 runtime_log.err
[2025-12-18 13:02:45] -rw------- 1 boinc boinc       662 Dec 18 13:02 WqeNDmFBvp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmY4aKDmjI48Gm.diag
[2025-12-18 13:02:45] -rw-r--r-- 1 boinc boinc      8643 Dec 18 13:02 stderr.txt
[2025-12-18 13:02:45] HITS file was successfully produced:
[2025-12-18 13:02:45] -rw------- 1 boinc boinc 150278327 Dec 18 13:01 shared/HITS.pool.root.1
[2025-12-18 13:02:45]  *** Contents of shared directory: ***
[2025-12-18 13:02:45] total 336024
[2025-12-18 13:02:45] -rw-r--r-- 2 boinc boinc 191719229 Dec 18 10:48 ATLAS.root_0
[2025-12-18 13:02:45] -rw-r--r-- 2 boinc boinc    592398 Dec 18 10:48 input.tar.gz
[2025-12-18 13:02:45] -rw-r--r-- 2 boinc boinc     15847 Dec 18 10:48 start_atlas.sh
[2025-12-18 13:02:45] -rw------- 1 boinc boinc 150278327 Dec 18 13:01 HITS.pool.root.1
[2025-12-18 13:02:45] -rw------- 1 boinc boinc   1464320 Dec 18 13:02 result.tar.gz
13:02:46 (1797247): run_atlas exited; CPU time 15627.059169
13:02:46 (1797247): called boinc_finish(0)

</stderr_txt>
]]>

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