Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-17 20:16:36 (3688): vboxwrapper version 26210
2025-12-17 20:16:36 (3688): BOINC client version: 8.2.8
2025-12-17 20:16:36 (3688): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-12-17 20:16:37 (3688): Successfully copied 'init_data.xml' to the shared directory.
2025-12-17 20:16:37 (3688): Create VM. (boinc_f9fd3dc4fd1f06d3, slot#0)
2025-12-17 20:16:37 (3688): Setting Memory Size for VM. (4800MB)
2025-12-17 20:16:38 (3688): Setting CPU Count for VM. (8)
2025-12-17 20:16:38 (3688): Setting Chipset Options for VM.
2025-12-17 20:16:38 (3688): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-17 20:16:38 (3688): Setting Boot Options for VM.
2025-12-17 20:16:39 (3688): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-17 20:16:39 (3688): Enabling VM Network Access.
2025-12-17 20:16:40 (3688): Disabling USB Support for VM.
2025-12-17 20:16:40 (3688): Disabling COM Port Support for VM.
2025-12-17 20:16:40 (3688): Disabling LPT Port Support for VM.
2025-12-17 20:16:40 (3688): Disabling Audio Support for VM.
2025-12-17 20:16:41 (3688): Disabling Clipboard Support for VM.
2025-12-17 20:16:41 (3688): Disabling Drag and Drop Support for VM.
2025-12-17 20:16:41 (3688): Adding storage controller(s) to VM.
2025-12-17 20:16:41 (3688): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-17 20:16:44 (3688): Adding VirtualBox Guest Additions to VM.
2025-12-17 20:16:44 (3688): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-17 20:16:44 (3688): forwarding host port 57165 to guest port 80
2025-12-17 20:16:44 (3688): Enabling remote desktop for VM.
2025-12-17 20:16:45 (3688): Required extension pack not installed, remote desktop not enabled.
2025-12-17 20:16:45 (3688): Enabling shared directory for VM.
2025-12-17 20:16:45 (3688): Starting VM using VBoxManage interface. (boinc_f9fd3dc4fd1f06d3, slot#0)
2025-12-17 20:16:57 (3688): Successfully started VM. (PID = '22676')
2025-12-17 20:16:57 (3688): Reporting VM Process ID to BOINC.
2025-12-17 20:16:57 (3688): Guest Log: BIOS: VirtualBox 7.0.6
2025-12-17 20:16:57 (3688): Guest Log: CPUID EDX: 0x178bfbff
2025-12-17 20:16:57 (3688): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-17 20:16:57 (3688): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-17 20:16:57 (3688): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-17 20:16:57 (3688): Detected: Web Application Enabled (http://localhost:57165)
2025-12-17 20:16:57 (3688): Preference change detected
2025-12-17 20:16:57 (3688): Setting CPU throttle for VM. (100%)
2025-12-17 20:16:57 (3688): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-17 20:16:59 (3688): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-17 20:16:59 (3688): Guest Log: BIOS: Booting from Hard Disk...
2025-12-17 20:17:02 (3688): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-17 20:17:02 (3688): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-17 20:17:02 (3688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-17 20:17:08 (3688): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-17 20:17:08 (3688): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-17 20:17:18 (3688): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-17 20:17:18 (3688): Guest Log: 00:00:00.000296 main     Log opened 2025-12-17T20:17:17.283025000Z
2025-12-17 20:17:18 (3688): Guest Log: 00:00:00.000588 main     OS Product: Linux
2025-12-17 20:17:18 (3688): Guest Log: 00:00:00.000691 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-17 20:17:18 (3688): Guest Log: 00:00:00.000757 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-17 20:17:18 (3688): Guest Log: 00:00:00.000929 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-17 20:17:18 (3688): Guest Log: 00:00:00.000931 main     Process ID: 1369
2025-12-17 20:17:18 (3688): Guest Log: 00:00:00.000933 main     Package type: LINUX_64BITS_GENERIC
2025-12-17 20:17:18 (3688): Guest Log: 00:00:00.004597 main     5.2.32 r132073 started. Verbose level = 0
2025-12-17 20:17:18 (3688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-17 20:17:18 (3688): Guest Log: [INFO] Mounting shared directory
2025-12-17 20:17:19 (3688): Guest Log: [INFO] Checking for init_data.xml
2025-12-17 20:17:22 (3688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-17 20:17:22 (3688): Guest Log: [INFO] Detected branch: prod
2025-12-17 20:17:22 (3688): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-17 20:17:22 (3688): Guest Log: Copying input files
2025-12-17 20:17:24 (3688): Guest Log: Copied input files into RunAtlas.
2025-12-17 20:17:25 (3688): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-17 20:17:25 (3688): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-17 20:17:25 (3688): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-17 20:17:25 (3688): Guest Log: Further information can be found at the LHC@home message board.
2025-12-17 20:17:28 (3688): Guest Log: 00:00:10.009502 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 695 473 000ns (GuestNow=1 766 020 647 986 820 000 ns GuestLast=1 766 002 637 291 347 000 ns fSetTimeLastLoop=true )
2025-12-17 20:17:33 (3688): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-17 20:17:33 (3688): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-17 20:17:33 (3688): Guest Log: 2.6.3.0 1650 0 32060 154129 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-17 20:17:34 (3688): Guest Log: copied the webapp to /var/www
2025-12-17 20:17:34 (3688): Guest Log: ATHENA_PROC_NUMBER=8
2025-12-17 20:17:34 (3688): Guest Log: ATHENA_CORE_NUMBER=8
2025-12-17 20:17:35 (3688): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-17 20:17:35 (3688): Guest Log:  *** Starting ATLAS job. (PandaID=6932535313 taskID=47929047) ***
2025-12-17 21:57:10 (3688): Status Report: Elapsed Time: '6000.000000'
2025-12-17 21:57:10 (3688): Status Report: CPU Time: '39945.437500'
2025-12-17 22:57:44 (3688): Guest Log:  *** Job finished ***
2025-12-17 22:57:44 (3688): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:17,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:17,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:37,501 | INFO     | [monitor] cgroup control has ended
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:37,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493068388160)>', '<ExcThread(monitor, started 140492373210880)>']
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:38,328 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:38,328 | INFO     | [monitor] control thread has ended
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,623 | INFO     | all workflow threads have been joined
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,624 | INFO     | end of generic workflow (traces error code: 0)
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,624 | INFO     | traces error code: 0
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,726 [wrapper] ==== pilot stdout END ====
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,739 [wrapper] ==== wrapper stdout RESUME ====
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,750 [wrapper] pilotpid: 6084
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,760 [wrapper] Pilot exit status: 0
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,845 [wrapper] pandaids: 6932535313
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,924 [wrapper] cleanup supervisor_pilot  8210 6085
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,946 [wrapper] Test setup, not cleaning
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,958 [wrapper] apfmon messages muted
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,974 [wrapper] ==== wrapper stdout END ====
2025-12-17 22:57:44 (3688): Guest Log: 2025-12-18 03:57:42,988 [wrapper] ==== wrapper stderr END ====
2025-12-17 22:57:44 (3688): Guest Log:  *** Error codes and diagnostics ***
2025-12-17 22:57:44 (3688): Guest Log:     "exeErrorCode": 0,
2025-12-17 22:57:44 (3688): Guest Log:     "exeErrorDiag": "",
2025-12-17 22:57:44 (3688): Guest Log:     "pilotErrorCode": 0,
2025-12-17 22:57:44 (3688): Guest Log:     "pilotErrorDiag": "",
2025-12-17 22:57:44 (3688): Guest Log:  *** Listing of results directory ***
2025-12-17 22:57:44 (3688): Guest Log: total 226856
2025-12-17 22:57:44 (3688): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 17 14:12 pilot3.tar.gz
2025-12-17 22:57:44 (3688): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 17 14:14 queuedata.json
2025-12-17 22:57:44 (3688): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 17 14:17 runpilot2-wrapper.sh
2025-12-17 22:57:44 (3688): Guest Log: -rwxr-xr-x. 1 atlas atlas      8903 Dec 18 01:17 init_data.xml
2025-12-17 22:57:44 (3688): Guest Log: -rwxr-xr-x. 1 atlas atlas    592406 Dec 18 01:17 input.tar.gz
2025-12-17 22:57:44 (3688): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 18 01:17 start_atlas.sh
2025-12-17 22:57:44 (3688): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 18 01:17 EVNT.47929045._000019.pool.root.1 -> /data/./ATLAS.root_0
2025-12-17 22:57:44 (3688): Guest Log: -rw-r--r--. 1 atlas atlas      2590 Dec 18 01:17 pandaJob.out
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas    988102 Dec 18 01:18 agis_schedconf.cvmfs.json
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 18 01:18 agis_ddmendpoints.agis.ALL.json
2025-12-17 22:57:44 (3688): Guest Log: drwx------. 5 atlas atlas      4096 Dec 18 01:18 pilot3
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas 225178660 Dec 18 03:55 HITS.47929047._000461.pool.root.1
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas      1037 Dec 18 03:56 memory_monitor_summary.json
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas    385729 Dec 18 03:56 log.47929047._000461.job.log.tgz.1
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas      7831 Dec 18 03:56 heartbeat.json
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas        95 Dec 18 03:57 pilot_heartbeat.json
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas      4877 Dec 18 03:57 pilotlog.txt
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas   1251035 Dec 18 03:57 log.47929047._000461.job.log.1
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas       357 Dec 18 03:57 output.list
2025-12-17 22:57:44 (3688): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 18 03:57 runtime_log
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas   1658880 Dec 18 03:57 result.tar.gz
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas       659 Dec 18 03:57 QVWKDm6V7p8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQJcKDmBmPKAn.diag
2025-12-17 22:57:44 (3688): Guest Log: -rw-r--r--. 1 atlas atlas      8758 Dec 18 03:57 runtime_log.err
2025-12-17 22:57:44 (3688): Guest Log: Looking for outputfile HITS.47929047._000461.pool.root.1
2025-12-17 22:57:44 (3688): Guest Log: HITS file was successfully produced
2025-12-17 22:57:44 (3688): Guest Log: -rw-------. 1 atlas atlas 225178660 Dec 18 03:55 /home/atlas/RunAtlas/HITS.47929047._000461.pool.root.1
2025-12-17 22:57:45 (3688): Guest Log: Successfully finished the ATLAS job!
2025-12-17 22:57:45 (3688): Guest Log: Copying the results back to the shared directory!
2025-12-17 22:57:45 (3688): Guest Log:  *** Contents of shared directory: ***
2025-12-17 22:57:46 (3688): Guest Log: total 505132
2025-12-17 22:57:46 (3688): Guest Log: -rwxrwxrwx. 1 root root 289788568 Dec 18 01:16 ATLAS.root_0
2025-12-17 22:57:46 (3688): Guest Log: -rwxrwxrwx. 1 root root 225178660 Dec 18 03:57 HITS.pool.root.1
2025-12-17 22:57:46 (3688): Guest Log: -rwxrwxrwx. 1 root root      8903 Dec 18 01:16 init_data.xml
2025-12-17 22:57:46 (3688): Guest Log: -rwxrwxrwx. 1 root root    592406 Dec 17 20:19 input.tar.gz
2025-12-17 22:57:46 (3688): Guest Log: -rwxrwxrwx. 1 root root   1658880 Dec 18 03:57 result.tar.gz
2025-12-17 22:57:46 (3688): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 17 20:19 start_atlas.sh
2025-12-17 22:57:46 (3688): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-17 22:57:46 (3688): VM Completion File Detected.
2025-12-17 22:57:46 (3688): Powering off VM.
2025-12-17 22:57:48 (3688): Successfully stopped VM.
2025-12-17 22:57:48 (3688): Deregistering VM. (boinc_f9fd3dc4fd1f06d3, slot#0)
2025-12-17 22:57:48 (3688): Removing network bandwidth throttle group from VM.
2025-12-17 22:57:48 (3688): Removing VM from VirtualBox.
2025-12-17 22:57:54 (3688): called boinc_finish(0)

</stderr_txt>
]]>

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