Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:09:07 (3891023): wrapper (7.7.26015): starting
22:09:07 (3891023): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 22:09:07] Arguments: --nthreads 12
[2025-12-17 22:09:07] Threads: 12
[2025-12-17 22:09:07] Checking for CVMFS
[2025-12-17 22:09:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 22:09:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 22:09:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 22:09:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 22:09:08] 2.13.2.0 9379 64890 341064 154130 0 374 36383994 39288833 10982 16776704 0 64629648 99.543 83696271 36685 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 22:09:08] CVMFS is ok
[2025-12-17 22:09:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 22:09:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 22:09:08] Further information can be found at the LHC@home message board.
[2025-12-17 22:09:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 22:09:08] Checking for apptainer binary...
[2025-12-17 22:09:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 22:09:08] Running /usr/bin/apptainer --version
[2025-12-17 22:09:08] apptainer version 1.4.5-2.el9
[2025-12-17 22:09:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 22:09:08] c-210-19.aglt2.org
[2025-12-17 22:09:08] apptainer works
[2025-12-17 22:09:08] Set ATHENA_PROC_NUMBER=12
[2025-12-17 22:09:08] Set ATHENA_CORE_NUMBER=12
[2025-12-17 22:09:08] Starting ATLAS job with PandaID=6932535299
[2025-12-17 22:09:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 10:10:02]  *** The last 200 lines of the pilot log: ***
[2025-12-18 10:10:02] 2025-12-18 15:08:47,396 | INFO     | time since job start (43165s) is within the limit (174528.0s)
[2025-12-18 10:10:02] 2025-12-18 15:08:48,303 | INFO     | monitor loop #2128: job 0:6932535299 is in state 'finished'
[2025-12-18 10:10:02] 2025-12-18 15:08:48,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 10:10:02] 2025-12-18 15:08:49,403 | INFO     | time since job start (43167s) is within the limit (174528.0s)
[2025-12-18 10:10:02] 2025-12-18 15:08:49,602 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-18 10:10:02] 2025-12-18 15:08:49,664 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.84605
[2025-12-18 10:10:02] 2025-12-18 15:08:49,720 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6932535299/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 10:10:02] 2025-12-18 15:08:49,721 | INFO     | extracted standard info from prmon json
[2025-12-18 10:10:02] 2025-12-18 15:08:49,721 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 10:10:02] 2025-12-18 15:08:49,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 10:10:02] 2025-12-18 15:08:49,722 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 10:10:02] 2025-12-18 15:08:49,722 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 10:10:02] 2025-12-18 15:08:49,735 | INFO     | fitting pss+swap vs Time
[2025-12-18 10:10:02] 2025-12-18 15:08:49,737 | INFO     | sum of square deviations: 109578217637.0276
[2025-12-18 10:10:02] 2025-12-18 15:08:49,851 | INFO     | sum of deviations: -98850346537.89676
[2025-12-18 10:10:02] 2025-12-18 15:08:49,851 | INFO     | mean x: 1766048926.9250355
[2025-12-18 10:10:02] 2025-12-18 15:08:49,851 | INFO     | mean y: 2711670.8698727014
[2025-12-18 10:10:02] 2025-12-18 15:08:49,851 | INFO     | intersect: 1595861771.2638214
[2025-12-18 10:10:02] 2025-12-18 15:08:49,895 | INFO     | chi2: 5.383284844910817
[2025-12-18 10:10:02] 2025-12-18 15:08:49,897 | INFO     | sum of square deviations: 107270287265.33344
[2025-12-18 10:10:02] 2025-12-18 15:08:50,057 | INFO     | sum of deviations: 161171109199.44418
[2025-12-18 10:10:02] 2025-12-18 15:08:50,057 | INFO     | mean x: 1766048774.4444444
[2025-12-18 10:10:02] 2025-12-18 15:08:50,058 | INFO     | mean y: 2728849.254985755
[2025-12-18 10:10:02] 2025-12-18 15:08:50,107 | INFO     | intersect: -2650718318.0251937
[2025-12-18 10:10:02] 2025-12-18 15:08:50,108 | INFO     | chi2: 1.3484669244391518
[2025-12-18 10:10:02] 2025-12-18 15:08:50,108 | INFO     | current chi2=1.3484669244391518 (change=74.950853181883 %)
[2025-12-18 10:10:02] 2025-12-18 15:08:50,110 | INFO     | sum of square deviations: 104994322676.58864
[2025-12-18 10:10:02] 2025-12-18 15:08:50,284 | INFO     | sum of deviations: 159836754882.5884
[2025-12-18 10:10:02] 2025-12-18 15:08:50,284 | INFO     | mean x: 1766048621.9411764
[2025-12-18 10:10:02] 2025-12-18 15:08:50,284 | INFO     | mean y: 2728759.843615495
[2025-12-18 10:10:02] 2025-12-18 15:08:50,285 | INFO     | intersect: -2685792614.4543376
[2025-12-18 10:10:02] 2025-12-18 15:08:50,297 | INFO     | chi2: 1.3484746169146244
[2025-12-18 10:10:02] 2025-12-18 15:08:50,298 | INFO     | current chi2=1.3484746169146244 (change=-0.0005704608198535338 %)
[2025-12-18 10:10:02] 2025-12-18 15:08:50,298 | INFO     | right removable region: 696
[2025-12-18 10:10:02] 2025-12-18 15:08:50,299 | INFO     | sum of square deviations: 107269069151.44316
[2025-12-18 10:10:02] 2025-12-18 15:08:50,440 | INFO     | sum of deviations: -213449379787.6325
[2025-12-18 10:10:02] 2025-12-18 15:08:50,440 | INFO     | mean x: 1766049079.445869
[2025-12-18 10:10:02] 2025-12-18 15:08:50,440 | INFO     | mean y: 2719218.299145299
[2025-12-18 10:10:02] 2025-12-18 15:08:50,440 | INFO     | intersect: 3516892350.0715723
[2025-12-18 10:10:02] 2025-12-18 15:08:50,441 | INFO     | chi2: 4.106641625696343
[2025-12-18 10:10:02] 2025-12-18 15:08:50,441 | INFO     | current chi2=4.106641625696343 (change=23.71494832604614 %)
[2025-12-18 10:10:02] 2025-12-18 15:08:50,442 | INFO     | left removable region: 10
[2025-12-18 10:10:02] 2025-12-18 15:08:50,442 | INFO     | sum of square deviations: 100100038367.38199
[2025-12-18 10:10:02] 2025-12-18 15:08:50,654 | INFO     | sum of deviations: 22947898459.39359
[2025-12-18 10:10:02] 2025-12-18 15:08:50,654 | INFO     | mean x: 1766048896.4868805
[2025-12-18 10:10:02] 2025-12-18 15:08:50,655 | INFO     | mean y: 2738050.5437317784
[2025-12-18 10:10:02] 2025-12-18 15:08:50,655 | INFO     | intersect: -402128035.54271436
[2025-12-18 10:10:02] 2025-12-18 15:08:50,656 | INFO     | chi2: 0.004541093188302207
[2025-12-18 10:10:02] 2025-12-18 15:08:50,656 | INFO     | current memory leak: 0.23 B/s (using 686 data points, chi2=0.00)
[2025-12-18 10:10:02] 2025-12-18 15:08:50,707 | INFO     | could have reported an average CPU frequency of 2595 MHz (27 samples)
[2025-12-18 10:10:02] 2025-12-18 15:08:50,707 | INFO     | ..............................
[2025-12-18 10:10:02] 2025-12-18 15:08:50,707 | INFO     | . Timing measurements:
[2025-12-18 10:10:02] 2025-12-18 15:08:50,708 | INFO     | . get job = 0 s
[2025-12-18 10:10:02] 2025-12-18 15:08:50,708 | INFO     | . initial setup = 2 s
[2025-12-18 10:10:02] 2025-12-18 15:08:50,708 | INFO     | . payload setup = 7 s
[2025-12-18 10:10:02] 2025-12-18 15:08:50,708 | INFO     | . stage-in = 0 s
[2025-12-18 10:10:02] 2025-12-18 15:08:50,708 | INFO     | . payload execution = 43094 s
[2025-12-18 10:10:02] 2025-12-18 15:08:50,708 | INFO     | . stage-out = 4 s
[2025-12-18 10:10:02] 2025-12-18 15:08:50,708 | INFO     | . log creation = 1 s
[2025-12-18 10:10:02] 2025-12-18 15:08:50,708 | INFO     | ..............................
[2025-12-18 10:10:02] 2025-12-18 15:08:51,448 | INFO     | time since job start (43169s) is within the limit (174528.0s)
[2025-12-18 10:10:02] 2025-12-18 15:08:52,002 | INFO     | 
[2025-12-18 10:10:02] 2025-12-18 15:08:52,002 | INFO     | job summary report
[2025-12-18 10:10:02] 2025-12-18 15:08:52,002 | INFO     | --------------------------------------------------
[2025-12-18 10:10:02] 2025-12-18 15:08:52,002 | INFO     | PanDA job id: 6932535299
[2025-12-18 10:10:02] 2025-12-18 15:08:52,002 | INFO     | task id: 47929047
[2025-12-18 10:10:02] 2025-12-18 15:08:52,003 | INFO     | errors: (none)
[2025-12-18 10:10:02] 2025-12-18 15:08:52,003 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 10:10:02] 2025-12-18 15:08:52,003 | INFO     | pilot state: finished 
[2025-12-18 10:10:02] 2025-12-18 15:08:52,003 | INFO     | transexitcode: 0
[2025-12-18 10:10:02] 2025-12-18 15:08:52,003 | INFO     | exeerrorcode: 0
[2025-12-18 10:10:02] 2025-12-18 15:08:52,003 | INFO     | exeerrordiag: 
[2025-12-18 10:10:02] 2025-12-18 15:08:52,003 | INFO     | exitcode: 0
[2025-12-18 10:10:02] 2025-12-18 15:08:52,003 | INFO     | exitmsg: OK
[2025-12-18 10:10:02] 2025-12-18 15:08:52,003 | INFO     | cpuconsumptiontime: 60535 s
[2025-12-18 10:10:02] 2025-12-18 15:08:52,004 | INFO     | nevents: 400
[2025-12-18 10:10:02] 2025-12-18 15:08:52,004 | INFO     | neventsw: 0
[2025-12-18 10:10:02] 2025-12-18 15:08:52,004 | INFO     | pid: 3901077
[2025-12-18 10:10:02] 2025-12-18 15:08:52,004 | INFO     | pgrp: 3901077
[2025-12-18 10:10:02] 2025-12-18 15:08:52,004 | INFO     | corecount: 12
[2025-12-18 10:10:02] 2025-12-18 15:08:52,004 | INFO     | event service: False
[2025-12-18 10:10:02] 2025-12-18 15:08:52,004 | INFO     | sizes: {0: 2283900, 1: 2284099, 6: 2284361, 11: 2284389, 43105: 2327162, 43110: 2336160, 43111: 2336344, 43154: 2336538}
[2025-12-18 10:10:02] 2025-12-18 15:08:52,004 | INFO     | --------------------------------------------------
[2025-12-18 10:10:02] 2025-12-18 15:08:52,004 | INFO     | 
[2025-12-18 10:10:02] 2025-12-18 15:08:52,005 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-18 10:10:02] 2025-12-18 15:08:52,339 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,339 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,340 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,340 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,340 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,340 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,340 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,340 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,341 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,341 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,341 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,341 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,341 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 10:10:02] 2025-12-18 15:08:52,342 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,342 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 10:10:02] 2025-12-18 15:08:52,342 | INFO     | job 6932535299 has completed (purged errors)
[2025-12-18 10:10:02] 2025-12-18 15:08:52,342 | INFO     | overall cleanup function is called
[2025-12-18 10:10:02] 2025-12-18 15:08:53,537 | INFO     | --- collectZombieJob: --- 10, [3901077]
[2025-12-18 10:10:02] 2025-12-18 15:08:53,666 | INFO     | zombie collector waiting for pid 3901077
[2025-12-18 10:10:02] 2025-12-18 15:08:53,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 10:10:02] 2025-12-18 15:08:53,666 | INFO     | collected zombie processes
[2025-12-18 10:10:02] 2025-12-18 15:08:53,666 | INFO     | will attempt to kill all subprocesses of pid=3901077
[2025-12-18 10:10:02] 2025-12-18 15:08:57,315 | INFO     | PID=3894694 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 10:10:02] 2025-12-18 15:08:57,316 | INFO     | .. there are 15 such processes running
[2025-12-18 10:10:02] 2025-12-18 15:08:57,616 | INFO     | process IDs to be killed: [3901077] (in reverse order)
[2025-12-18 10:10:02] 2025-12-18 15:08:57,795 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 10:10:02] 2025-12-18 15:08:57,795 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 10:10:02] 2025-12-18 15:08:57,807 | INFO     | did not find any defunct processes belonging to 3901077
[2025-12-18 10:10:02] 2025-12-18 15:08:57,818 | INFO     | did not find any defunct processes belonging to 3901077
[2025-12-18 10:10:02] 2025-12-18 15:08:57,819 | INFO     | ready for new job
[2025-12-18 10:10:02] 2025-12-18 15:08:57,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 10:10:02] 2025-12-18 15:08:57,847 | INFO     | ***************************************
[2025-12-18 10:10:02] 2025-12-18 15:08:57,848 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 10:10:02] 2025-12-18 15:08:57,848 | INFO     | ***************************************
[2025-12-18 10:10:02] 2025-12-18 15:08:57,848 | INFO     | 
[2025-12-18 10:10:02] 2025-12-18 15:08:57,850 | INFO     | architecture information:
[2025-12-18 10:10:02] 2025-12-18 15:08:57,925 | INFO     | executing command: cat /etc/os-release
[2025-12-18 10:10:02] 2025-12-18 15:08:58,116 | INFO     | cat /etc/os-release:
[2025-12-18 10:10:02] NAME="CentOS Linux"
[2025-12-18 10:10:02] VERSION="7 (Core)"
[2025-12-18 10:10:02] ID="centos"
[2025-12-18 10:10:02] ID_LIKE="rhel fedora"
[2025-12-18 10:10:02] VERSION_ID="7"
[2025-12-18 10:10:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 10:10:02] ANSI_COLOR="0;31"
[2025-12-18 10:10:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 10:10:02] HOME_URL="https://www.centos.org/"
[2025-12-18 10:10:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 10:10:02] 
[2025-12-18 10:10:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 10:10:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 10:10:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 10:10:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 10:10:02] 
[2025-12-18 10:10:02] 2025-12-18 15:08:58,116 | INFO     | ***************************************
[2025-12-18 10:10:02] 2025-12-18 15:08:58,620 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-18 10:10:02] 2025-12-18 15:08:58,766 | INFO     | sufficient remaining disk space (51815383040 B)
[2025-12-18 10:10:02] 2025-12-18 15:08:58,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 10:10:02] 2025-12-18 15:08:58,767 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 10:10:02] 2025-12-18 15:08:58,767 | INFO     | update_server=False
[2025-12-18 10:10:02] 2025-12-18 15:08:58,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 10:10:02] 2025-12-18 15:08:59,405 | INFO     | all job control threads have been joined
[2025-12-18 10:10:02] 2025-12-18 15:08:59,556 | INFO     | all data control threads have been joined
[2025-12-18 10:10:02] 2025-12-18 15:08:59,582 | INFO     | all payload control threads have been joined
[2025-12-18 10:10:02] 2025-12-18 15:08:59,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 10:10:02] 2025-12-18 15:08:59,676 | INFO     | aborting loop
[2025-12-18 10:10:02] 2025-12-18 15:08:59,773 | INFO     | [job] retrieve thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:08:59,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 10:10:02] 2025-12-18 15:09:00,006 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:00,083 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:00,085 | INFO     | [data] copytool_in thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:00,097 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:00,312 | INFO     | [payload] validate_post thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:00,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 10:10:02] 2025-12-18 15:09:00,411 | INFO     | [job] control thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:00,561 | INFO     | [data] control thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:00,588 | INFO     | [payload] control thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:00,626 | INFO     | [job] validate thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:00,682 | INFO     | [job] job monitor thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:00,867 | INFO     | [payload] failed_post thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:01,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 10:10:02] 2025-12-18 15:09:01,796 | INFO     | [data] copytool_out thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:02,048 | INFO     | [job] queue monitor thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:04,419 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:09,837 | INFO     | job.realtimelogging is not enabled
[2025-12-18 10:10:02] 2025-12-18 15:09:10,843 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 10:10:02] 2025-12-18 15:09:33,516 [wrapper] supervise_pilot (15 min periods counter: 49)
[2025-12-18 10:10:02] 2025-12-18 15:09:39,019 | INFO     | PID=3894694 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 10:10:02] 2025-12-18 15:09:39,020 | INFO     | .. there are 15 such processes running
[2025-12-18 10:10:02] 2025-12-18 15:09:39,158 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 10:10:02] 2025-12-18 15:09:39,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 10:10:02] 2025-12-18 15:09:39,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 10:10:02] 2025-12-18 15:09:52,202 | INFO     | [monitor] cgroup control has ended
[2025-12-18 10:10:02] 2025-12-18 15:09:53,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263989548864)>', '<ExcThread(monitor, started 140263347443456)>']
[2025-12-18 10:10:02] 2025-12-18 15:09:53,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 10:10:02] 2025-12-18 15:09:53,363 | INFO     | [monitor] control thread has ended
[2025-12-18 10:10:02] 2025-12-18 15:09:58,194 | INFO     | all workflow threads have been joined
[2025-12-18 10:10:02] 2025-12-18 15:09:58,194 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 10:10:02] 2025-12-18 15:09:58,194 | INFO     | traces error code: 0
[2025-12-18 10:10:02] 2025-12-18 15:09:58,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 10:10:02] 2025-12-18 15:10:00,121 [wrapper] ==== pilot stdout END ====
[2025-12-18 10:10:02] 2025-12-18 15:10:00,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 10:10:02] 2025-12-18 15:10:00,289 [wrapper] pilotpid: 3894694
[2025-12-18 10:10:02] 2025-12-18 15:10:00,344 [wrapper] Pilot exit status: 0
[2025-12-18 10:10:02] 2025-12-18 15:10:00,576 [wrapper] pandaids: 6932535299
[2025-12-18 10:10:02] 2025-12-18 15:10:00,976 [wrapper] cleanup supervisor_pilot 1685806 3894695
[2025-12-18 10:10:02] 2025-12-18 15:10:00,991 [wrapper] Test setup, not cleaning
[2025-12-18 10:10:02] 2025-12-18 15:10:01,033 [wrapper] apfmon messages muted
[2025-12-18 10:10:02] 2025-12-18 15:10:01,066 [wrapper] ==== wrapper stdout END ====
[2025-12-18 10:10:02] 2025-12-18 15:10:01,113 [wrapper] ==== wrapper stderr END ====
[2025-12-18 10:10:02]  *** Error codes and diagnostics ***
[2025-12-18 10:10:02]     "exeErrorCode": 0,
[2025-12-18 10:10:02]     "exeErrorDiag": "",
[2025-12-18 10:10:02]     "pilotErrorCode": 0,
[2025-12-18 10:10:02]     "pilotErrorDiag": "",
[2025-12-18 10:10:02]  *** Listing of results directory ***
[2025-12-18 10:10:02] total 529396
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 09:12 pilot3.tar.gz
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 09:14 queuedata.json
[2025-12-18 10:10:02] -rwx------. 1 boincer umatlas     36322 Dec 17 09:17 runpilot2-wrapper.sh
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas       100 Dec 17 22:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 10:10:02] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 22:09 run_atlas
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas       105 Dec 17 22:09 job.xml
[2025-12-18 10:10:02] -rw-r--r--. 2 boincer umatlas 291266810 Dec 17 22:09 EVNT.47929045._000018.pool.root.1
[2025-12-18 10:10:02] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 22:09 shared
[2025-12-18 10:10:02] -rw-r--r--. 2 boincer umatlas    592405 Dec 17 22:09 input.tar.gz
[2025-12-18 10:10:02] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 22:09 start_atlas.sh
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas         0 Dec 17 22:09 boinc_lockfile
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas      2590 Dec 17 22:09 pandaJob.out
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas        57 Dec 17 22:09 setup.sh.local
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas    988110 Dec 17 22:09 agis_schedconf.cvmfs.json
[2025-12-18 10:10:02] drwx------. 5 boincer umatlas      4096 Dec 17 22:09 pilot3
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas      6710 Dec 18 10:00 init_data.xml
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas 235686191 Dec 18 10:03 HITS.47929047._000447.pool.root.1
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas       531 Dec 18 10:03 boinc_task_state.xml
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas      1041 Dec 18 10:08 memory_monitor_summary.json
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas   1516240 Dec 18 10:08 agis_ddmendpoints.agis.ALL.json
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas    848059 Dec 18 10:08 log.47929047._000447.job.log.tgz.1
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas      7814 Dec 18 10:08 heartbeat.json
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas        96 Dec 18 10:09 pilot_heartbeat.json
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas      4896 Dec 18 10:09 pilotlog.txt
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas   4767018 Dec 18 10:10 log.47929047._000447.job.log.1
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas       357 Dec 18 10:10 output.list
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas       620 Dec 18 10:10 runtime_log
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas   5632000 Dec 18 10:10 result.tar.gz
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas      9345 Dec 18 10:10 runtime_log.err
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas       659 Dec 18 10:10 dVCODm5V7p8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDJcKDmrCe6tn.diag
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas        28 Dec 18 10:10 wrapper_checkpoint.txt
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas     21417 Dec 18 10:10 stderr.txt
[2025-12-18 10:10:02] -rw-r--r--. 1 boincer umatlas      8192 Dec 18 10:10 boinc_mmap_file
[2025-12-18 10:10:02] HITS file was successfully produced:
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas 235686191 Dec 18 10:03 shared/HITS.pool.root.1
[2025-12-18 10:10:02]  *** Contents of shared directory: ***
[2025-12-18 10:10:02] total 520712
[2025-12-18 10:10:02] -rw-r--r--. 2 boincer umatlas 291266810 Dec 17 22:09 ATLAS.root_0
[2025-12-18 10:10:02] -rw-r--r--. 2 boincer umatlas    592405 Dec 17 22:09 input.tar.gz
[2025-12-18 10:10:02] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 22:09 start_atlas.sh
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas 235686191 Dec 18 10:03 HITS.pool.root.1
[2025-12-18 10:10:02] -rw-------. 1 boincer umatlas   5632000 Dec 18 10:10 result.tar.gz
10:10:24 (3891023): run_atlas exited; CPU time 61610.542889
10:10:24 (3891023): called boinc_finish(0)

</stderr_txt>
]]>

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