Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:49:09 (1739762): wrapper (7.7.26015): starting
14:49:09 (1739762): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 14:49:09] Arguments: --nthreads 8
[2025-12-17 14:49:09] Threads: 8
[2025-12-17 14:49:09] Checking for CVMFS
[2025-12-17 14:49:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 14:49:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 14:49:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 14:49:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 14:49:09] 2.13.2.0 2681929 9970 82428 154121 2 188 26421886 39288832 2739 16776704 0 21652759 99.997 300665 38320 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 14:49:09] CVMFS is ok
[2025-12-17 14:49:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 14:49:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 14:49:09] Further information can be found at the LHC@home message board.
[2025-12-17 14:49:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 14:49:09] Checking for apptainer binary...
[2025-12-17 14:49:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 14:49:09] Running /usr/bin/apptainer --version
[2025-12-17 14:49:09] apptainer version 1.4.5-2.el9
[2025-12-17 14:49:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 14:49:09] c-210-16.aglt2.org
[2025-12-17 14:49:09] apptainer works
[2025-12-17 14:49:09] Set ATHENA_PROC_NUMBER=8
[2025-12-17 14:49:09] Set ATHENA_CORE_NUMBER=8
[2025-12-17 14:49:09] Starting ATLAS job with PandaID=6932419083
[2025-12-17 14:49:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 17:18:38]  *** The last 200 lines of the pilot log: ***
[2025-12-17 17:18:38] 2025-12-17 22:17:58,059 | INFO     | mean x: 1766005400.5
[2025-12-17 17:18:38] 2025-12-17 22:17:58,059 | INFO     | mean y: 2516550.1506849313
[2025-12-17 17:18:38] 2025-12-17 22:17:58,059 | INFO     | intersect: -27943958547.619896
[2025-12-17 17:18:38] 2025-12-17 22:17:58,059 | INFO     | chi2: 1.2223644119651416
[2025-12-17 17:18:38] 2025-12-17 22:17:58,059 | INFO     | sum of square deviations: 869188390.0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,060 | INFO     | sum of deviations: 14762109068.000002
[2025-12-17 17:18:38] 2025-12-17 22:17:58,060 | INFO     | mean x: 1766005248.0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,061 | INFO     | mean y: 2515740.120567376
[2025-12-17 17:18:38] 2025-12-17 22:17:58,061 | INFO     | intersect: -29990938366.688652
[2025-12-17 17:18:38] 2025-12-17 22:17:58,061 | INFO     | chi2: 1.223545571870068
[2025-12-17 17:18:38] 2025-12-17 22:17:58,061 | INFO     | current chi2=1.223545571870068 (change=-0.09662911431032345 %)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,061 | INFO     | right removable region: 140
[2025-12-17 17:18:38] 2025-12-17 22:17:58,062 | INFO     | sum of square deviations: 869188390.0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,062 | INFO     | sum of deviations: -3590062646.0000005
[2025-12-17 17:18:38] 2025-12-17 22:17:58,062 | INFO     | mean x: 1766005553.0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,063 | INFO     | mean y: 2546102.709219858
[2025-12-17 17:18:38] 2025-12-17 22:17:58,063 | INFO     | intersect: 7296788227.197185
[2025-12-17 17:18:38] 2025-12-17 22:17:58,063 | INFO     | chi2: 0.04320298305897572
[2025-12-17 17:18:38] 2025-12-17 22:17:58,063 | INFO     | current chi2=0.04320298305897572 (change=96.46562165618678 %)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,063 | INFO     | sum of square deviations: 779958810.0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,064 | INFO     | sum of deviations: -5380132320.499999
[2025-12-17 17:18:38] 2025-12-17 22:17:58,064 | INFO     | mean x: 1766005705.5
[2025-12-17 17:18:38] 2025-12-17 22:17:58,064 | INFO     | mean y: 2549067.213235294
[2025-12-17 17:18:38] 2025-12-17 22:17:58,065 | INFO     | intersect: 12184403099.156221
[2025-12-17 17:18:38] 2025-12-17 22:17:58,065 | INFO     | chi2: 0.018911471939997537
[2025-12-17 17:18:38] 2025-12-17 22:17:58,065 | INFO     | current chi2=0.018911471939997537 (change=56.22646724606544 %)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,065 | INFO     | sum of square deviations: 697054930.0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,066 | INFO     | sum of deviations: -3946011615.0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,066 | INFO     | mean x: 1766005858.0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,066 | INFO     | mean y: 2546419.4961832063
[2025-12-17 17:18:38] 2025-12-17 22:17:58,066 | INFO     | intersect: 9999864174.391111
[2025-12-17 17:18:38] 2025-12-17 22:17:58,067 | INFO     | chi2: 0.01732637853512102
[2025-12-17 17:18:38] 2025-12-17 22:17:58,067 | INFO     | current chi2=0.01732637853512102 (change=8.381650089986191 %)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,067 | INFO     | left removable region: 30
[2025-12-17 17:18:38] 2025-12-17 22:17:58,067 | INFO     | sum of square deviations: 412686807.5
[2025-12-17 17:18:38] 2025-12-17 22:17:58,068 | INFO     | sum of deviations: 563079562.5
[2025-12-17 17:18:38] 2025-12-17 22:17:58,068 | INFO     | mean x: 1766006132.5
[2025-12-17 17:18:38] 2025-12-17 22:17:58,068 | INFO     | mean y: 2536742.6454545455
[2025-12-17 17:18:38] 2025-12-17 22:17:58,068 | INFO     | intersect: -2407043458.098949
[2025-12-17 17:18:38] 2025-12-17 22:17:58,069 | INFO     | chi2: 4.541523312723039e-05
[2025-12-17 17:18:38] 2025-12-17 22:17:58,069 | INFO     | current memory leak: 1.36 B/s (using 110 data points, chi2=0.00)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,069 | INFO     | could have reported an average CPU frequency of 2662 MHz (8 samples)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,069 | INFO     | ..............................
[2025-12-17 17:18:38] 2025-12-17 22:17:58,069 | INFO     | . Timing measurements:
[2025-12-17 17:18:38] 2025-12-17 22:17:58,070 | INFO     | . get job = 0 s
[2025-12-17 17:18:38] 2025-12-17 22:17:58,070 | INFO     | . initial setup = 2 s
[2025-12-17 17:18:38] 2025-12-17 22:17:58,070 | INFO     | . payload setup = 3 s
[2025-12-17 17:18:38] 2025-12-17 22:17:58,070 | INFO     | . stage-in = 0 s
[2025-12-17 17:18:38] 2025-12-17 22:17:58,070 | INFO     | . payload execution = 8893 s
[2025-12-17 17:18:38] 2025-12-17 22:17:58,070 | INFO     | . stage-out = 0 s
[2025-12-17 17:18:38] 2025-12-17 22:17:58,070 | INFO     | . log creation = 0 s
[2025-12-17 17:18:38] 2025-12-17 22:17:58,070 | INFO     | ..............................
[2025-12-17 17:18:38] 2025-12-17 22:17:58,299 | INFO     | 
[2025-12-17 17:18:38] 2025-12-17 22:17:58,300 | INFO     | job summary report
[2025-12-17 17:18:38] 2025-12-17 22:17:58,300 | INFO     | --------------------------------------------------
[2025-12-17 17:18:38] 2025-12-17 22:17:58,300 | INFO     | PanDA job id: 6932419083
[2025-12-17 17:18:38] 2025-12-17 22:17:58,300 | INFO     | task id: 47905873
[2025-12-17 17:18:38] 2025-12-17 22:17:58,300 | INFO     | errors: (none)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,300 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 17:18:38] 2025-12-17 22:17:58,300 | INFO     | pilot state: finished 
[2025-12-17 17:18:38] 2025-12-17 22:17:58,300 | INFO     | transexitcode: 0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,300 | INFO     | exeerrorcode: 0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,301 | INFO     | exeerrordiag: 
[2025-12-17 17:18:38] 2025-12-17 22:17:58,301 | INFO     | exitcode: 0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,301 | INFO     | exitmsg: OK
[2025-12-17 17:18:38] 2025-12-17 22:17:58,301 | INFO     | cpuconsumptiontime: 66112 s
[2025-12-17 17:18:38] 2025-12-17 22:17:58,301 | INFO     | nevents: 400
[2025-12-17 17:18:38] 2025-12-17 22:17:58,301 | INFO     | neventsw: 0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,301 | INFO     | pid: 1755673
[2025-12-17 17:18:38] 2025-12-17 22:17:58,301 | INFO     | pgrp: 1755673
[2025-12-17 17:18:38] 2025-12-17 22:17:58,302 | INFO     | corecount: 8
[2025-12-17 17:18:38] 2025-12-17 22:17:58,302 | INFO     | event service: False
[2025-12-17 17:18:38] 2025-12-17 22:17:58,302 | INFO     | sizes: {0: 2283681, 1: 2283880, 4: 2284142, 11: 2284170, 8901: 2312226, 8902: 2321408, 8907: 2321546}
[2025-12-17 17:18:38] 2025-12-17 22:17:58,302 | INFO     | --------------------------------------------------
[2025-12-17 17:18:38] 2025-12-17 22:17:58,302 | INFO     | 
[2025-12-17 17:18:38] 2025-12-17 22:17:58,302 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,318 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,319 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,319 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,321 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,321 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 17:18:38] 2025-12-17 22:17:58,321 | INFO     | job 6932419083 has completed (purged errors)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,321 | INFO     | overall cleanup function is called
[2025-12-17 17:18:38] 2025-12-17 22:17:58,579 | WARNING  | process 1755673 can no longer be monitored (due to stat problems) - aborting
[2025-12-17 17:18:38] 2025-12-17 22:17:58,746 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,747 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,747 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-17 17:18:38] 2025-12-17 22:17:58,747 | WARNING  | maxPSS not found in memory monitor output
[2025-12-17 17:18:38] 2025-12-17 22:17:58,748 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6932419083/payload.stdout) since it has not been created yet
[2025-12-17 17:18:38] 2025-12-17 22:17:58,748 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 17:18:38] 2025-12-17 22:17:58,762 | INFO     | sufficient remaining disk space (51126468608 B)
[2025-12-17 17:18:38] 2025-12-17 22:17:58,763 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-12-17 17:18:38] 2025-12-17 22:17:58,763 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6932419083/HITS.47905873._001201.pool.root.1 since it does not exist
[2025-12-17 17:18:38] 2025-12-17 22:17:58,977 | INFO     | number of running child processes to parent process 1755673: 1
[2025-12-17 17:18:38] 2025-12-17 22:17:58,977 | INFO     | maximum number of monitored processes: 6
[2025-12-17 17:18:38] 2025-12-17 22:17:58,978 | INFO     | aborting job monitoring since job object (job id=6932419083) has expired
[2025-12-17 17:18:38] 2025-12-17 22:17:59,329 | INFO     | --- collectZombieJob: --- 10, [1755673]
[2025-12-17 17:18:38] 2025-12-17 22:17:59,330 | INFO     | zombie collector waiting for pid 1755673
[2025-12-17 17:18:38] 2025-12-17 22:17:59,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 17:18:38] 2025-12-17 22:17:59,330 | INFO     | collected zombie processes
[2025-12-17 17:18:38] 2025-12-17 22:17:59,330 | INFO     | will attempt to kill all subprocesses of pid=1755673
[2025-12-17 17:18:38] 2025-12-17 22:17:59,541 | INFO     | process IDs to be killed: [1755673] (in reverse order)
[2025-12-17 17:18:38] 2025-12-17 22:17:59,599 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 17:18:38] 2025-12-17 22:17:59,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 17:18:38] 2025-12-17 22:17:59,605 | INFO     | did not find any defunct processes belonging to 1755673
[2025-12-17 17:18:38] 2025-12-17 22:17:59,610 | INFO     | did not find any defunct processes belonging to 1755673
[2025-12-17 17:18:38] 2025-12-17 22:17:59,610 | INFO     | ready for new job
[2025-12-17 17:18:38] 2025-12-17 22:17:59,611 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 17:18:38] 2025-12-17 22:17:59,613 | INFO     | ***************************************
[2025-12-17 17:18:38] 2025-12-17 22:17:59,613 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 17:18:38] 2025-12-17 22:17:59,613 | INFO     | ***************************************
[2025-12-17 17:18:38] 2025-12-17 22:17:59,613 | INFO     | 
[2025-12-17 17:18:38] 2025-12-17 22:17:59,615 | INFO     | architecture information:
[2025-12-17 17:18:38] 2025-12-17 22:17:59,615 | INFO     | executing command: cat /etc/os-release
[2025-12-17 17:18:38] 2025-12-17 22:17:59,628 | INFO     | cat /etc/os-release:
[2025-12-17 17:18:38] NAME="CentOS Linux"
[2025-12-17 17:18:38] VERSION="7 (Core)"
[2025-12-17 17:18:38] ID="centos"
[2025-12-17 17:18:38] ID_LIKE="rhel fedora"
[2025-12-17 17:18:38] VERSION_ID="7"
[2025-12-17 17:18:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 17:18:38] ANSI_COLOR="0;31"
[2025-12-17 17:18:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 17:18:38] HOME_URL="https://www.centos.org/"
[2025-12-17 17:18:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 17:18:38] 
[2025-12-17 17:18:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 17:18:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 17:18:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 17:18:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 17:18:38] 
[2025-12-17 17:18:38] 2025-12-17 22:17:59,629 | INFO     | ***************************************
[2025-12-17 17:18:38] 2025-12-17 22:18:00,132 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 17:18:38] 2025-12-17 22:18:00,146 | INFO     | sufficient remaining disk space (51127517184 B)
[2025-12-17 17:18:38] 2025-12-17 22:18:00,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 17:18:38] 2025-12-17 22:18:00,147 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 17:18:38] 2025-12-17 22:18:00,147 | INFO     | update_server=False
[2025-12-17 17:18:38] 2025-12-17 22:18:00,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 17:18:38] 2025-12-17 22:18:00,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 17:18:38] 2025-12-17 22:18:00,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 17:18:38] 2025-12-17 22:18:00,148 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 17:18:38] 2025-12-17 22:18:00,148 | INFO     | aborting loop
[2025-12-17 17:18:38] 2025-12-17 22:18:00,204 | INFO     | all job control threads have been joined
[2025-12-17 17:18:38] 2025-12-17 22:18:00,675 | INFO     | all data control threads have been joined
[2025-12-17 17:18:38] 2025-12-17 22:18:01,110 | INFO     | all payload control threads have been joined
[2025-12-17 17:18:38] 2025-12-17 22:18:01,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 17:18:38] 2025-12-17 22:18:01,152 | INFO     | [job] retrieve thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:01,154 | INFO     | [job] queue monitor thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:01,154 | INFO     | [job] job monitor thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:01,209 | INFO     | [job] control thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:01,213 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:01,296 | INFO     | [payload] failed_post thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:01,316 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:01,681 | INFO     | [data] control thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:01,820 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:02,115 | INFO     | [payload] control thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:02,261 | INFO     | [job] validate thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:02,261 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:02,519 | INFO     | [payload] validate_post thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:02,646 | INFO     | [data] copytool_in thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:03,132 | INFO     | [data] copytool_out thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:04,154 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 17:18:38] 2025-12-17 22:18:30,966 | INFO     | PID=1743478 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 17:18:38] 2025-12-17 22:18:30,967 | INFO     | .. there are 4 such processes running
[2025-12-17 17:18:38] 2025-12-17 22:18:30,967 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 17:18:38] 2025-12-17 22:18:30,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 17:18:38] 2025-12-17 22:18:30,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 17:18:38] 2025-12-17 22:18:31,797 | INFO     | [monitor] cgroup control has ended
[2025-12-17 17:18:38] 2025-12-17 22:18:32,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256264685376)>', '<ExcThread(monitor, started 140255629924096)>']
[2025-12-17 17:18:38] 2025-12-17 22:18:32,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 17:18:38] 2025-12-17 22:18:32,978 | INFO     | [monitor] control thread has ended
[2025-12-17 17:18:38] 2025-12-17 22:18:37,825 | INFO     | all workflow threads have been joined
[2025-12-17 17:18:38] 2025-12-17 22:18:37,825 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 17:18:38] 2025-12-17 22:18:37,826 | INFO     | traces error code: 0
[2025-12-17 17:18:38] 2025-12-17 22:18:37,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 17:18:38] 2025-12-17 22:18:37,918 [wrapper] ==== pilot stdout END ====
[2025-12-17 17:18:38] 2025-12-17 22:18:37,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 17:18:38] 2025-12-17 22:18:37,922 [wrapper] pilotpid: 1743478
[2025-12-17 17:18:38] 2025-12-17 22:18:37,924 [wrapper] Pilot exit status: 0
[2025-12-17 17:18:38] 2025-12-17 22:18:37,931 [wrapper] pandaids: 6932419083
[2025-12-17 17:18:38] 2025-12-17 22:18:37,969 [wrapper] cleanup supervisor_pilot 1969835 1743479
[2025-12-17 17:18:38] 2025-12-17 22:18:37,971 [wrapper] Test setup, not cleaning
[2025-12-17 17:18:38] 2025-12-17 22:18:37,973 [wrapper] apfmon messages muted
[2025-12-17 17:18:38] 2025-12-17 22:18:37,975 [wrapper] ==== wrapper stdout END ====
[2025-12-17 17:18:38] 2025-12-17 22:18:37,977 [wrapper] ==== wrapper stderr END ====
[2025-12-17 17:18:38]  *** Error codes and diagnostics ***
[2025-12-17 17:18:38]     "exeErrorCode": 0,
[2025-12-17 17:18:38]     "exeErrorDiag": "",
[2025-12-17 17:18:38]     "pilotErrorCode": 0,
[2025-12-17 17:18:38]     "pilotErrorDiag": "",
[2025-12-17 17:18:38]  *** Listing of results directory ***
[2025-12-17 17:18:38] total 405176
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 09:12 pilot3.tar.gz
[2025-12-17 17:18:38] -rwx------. 1 boincer umatlas     36322 Dec 17 09:14 runpilot2-wrapper.sh
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 09:14 queuedata.json
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas       100 Dec 17 14:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 17:18:38] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 14:49 run_atlas
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas       105 Dec 17 14:49 job.xml
[2025-12-17 17:18:38] -rw-r--r--. 2 boincer umatlas 203180476 Dec 17 14:49 EVNT.47905871._000046.pool.root.1
[2025-12-17 17:18:38] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 14:49 start_atlas.sh
[2025-12-17 17:18:38] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 14:49 shared
[2025-12-17 17:18:38] -rw-r--r--. 2 boincer umatlas    592375 Dec 17 14:49 input.tar.gz
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas         0 Dec 17 14:49 boinc_lockfile
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas      2468 Dec 17 14:49 pandaJob.out
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas        57 Dec 17 14:49 setup.sh.local
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas    988136 Dec 17 14:49 agis_schedconf.cvmfs.json
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas   1516240 Dec 17 14:49 agis_ddmendpoints.agis.ALL.json
[2025-12-17 17:18:38] drwx------. 5 boincer umatlas      4096 Dec 17 14:49 pilot3
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas      6663 Dec 17 17:12 init_data.xml
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas 204508469 Dec 17 17:17 HITS.47905873._001201.pool.root.1
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas       529 Dec 17 17:17 boinc_task_state.xml
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas      1032 Dec 17 17:17 memory_monitor_summary.json
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas    375913 Dec 17 17:17 log.47905873._001201.job.log.tgz.1
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas      7800 Dec 17 17:17 heartbeat.json
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas        95 Dec 17 17:18 pilot_heartbeat.json
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 17:18 boinc_mmap_file
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas        27 Dec 17 17:18 wrapper_checkpoint.txt
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas      4823 Dec 17 17:18 pilotlog.txt
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas   1272253 Dec 17 17:18 log.47905873._001201.job.log.1
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas       357 Dec 17 17:18 output.list
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas       620 Dec 17 17:18 runtime_log
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas   1669120 Dec 17 17:18 result.tar.gz
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas      9342 Dec 17 17:18 runtime_log.err
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas       652 Dec 17 17:18 mw8KDmFT7p8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8BcKDmugqiSo.diag
[2025-12-17 17:18:38] -rw-r--r--. 1 boincer umatlas     21433 Dec 17 17:18 stderr.txt
[2025-12-17 17:18:38] HITS file was successfully produced:
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas 204508469 Dec 17 17:17 shared/HITS.pool.root.1
[2025-12-17 17:18:38]  *** Contents of shared directory: ***
[2025-12-17 17:18:38] total 400368
[2025-12-17 17:18:38] -rw-r--r--. 2 boincer umatlas 203180476 Dec 17 14:49 ATLAS.root_0
[2025-12-17 17:18:38] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 14:49 start_atlas.sh
[2025-12-17 17:18:38] -rw-r--r--. 2 boincer umatlas    592375 Dec 17 14:49 input.tar.gz
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas 204508469 Dec 17 17:17 HITS.pool.root.1
[2025-12-17 17:18:38] -rw-------. 1 boincer umatlas   1669120 Dec 17 17:18 result.tar.gz
17:18:39 (1739762): run_atlas exited; CPU time 66314.397875
17:18:39 (1739762): called boinc_finish(0)

</stderr_txt>
]]>

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