Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:59:38 (3199165): wrapper (7.7.26015): starting
04:59:38 (3199165): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 04:59:38] Arguments: --nthreads 4
[2025-12-18 04:59:38] Threads: 4
[2025-12-18 04:59:38] Checking for CVMFS
[2025-12-18 04:59:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 04:59:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 04:59:38] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 04:59:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 04:59:39] 2.13.1.0 9815 6252 87804 154132 0 57 9185516 10240000 911 130560 0 7990196 99.937 546091 417 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-18 04:59:39] CVMFS is ok
[2025-12-18 04:59:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 04:59:39] Checking for apptainer binary...
[2025-12-18 04:59:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 04:59:39] Running /usr/bin/apptainer --version
[2025-12-18 04:59:39] apptainer version 1.4.5
[2025-12-18 04:59:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 04:59:39] atlas6l1
[2025-12-18 04:59:39] apptainer works
[2025-12-18 04:59:39] Set ATHENA_PROC_NUMBER=4
[2025-12-18 04:59:39] Set ATHENA_CORE_NUMBER=4
[2025-12-18 04:59:39] Starting ATLAS job with PandaID=6932419057
[2025-12-18 04:59:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 07:39:08]  *** The last 200 lines of the pilot log: ***
[2025-12-18 07:39:08] 2025-12-18 06:38:13,911 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-18 07:39:08] 2025-12-18 06:38:13,912 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2025-12-18 07:39:08] 2025-12-18 06:38:13,913 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6932419057/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 07:39:08] 2025-12-18 06:38:13,914 | INFO     | extracted standard info from prmon json
[2025-12-18 07:39:08] 2025-12-18 06:38:13,914 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 07:39:08] 2025-12-18 06:38:13,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 07:39:08] 2025-12-18 06:38:13,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 07:39:08] 2025-12-18 06:38:13,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 07:39:08] 2025-12-18 06:38:13,916 | INFO     | fitting pss+swap vs Time
[2025-12-18 07:39:08] 2025-12-18 06:38:13,916 | INFO     | sum of square deviations: 1177205254.6858943
[2025-12-18 07:39:08] 2025-12-18 06:38:13,916 | INFO     | sum of deviations: -2261473819.602557
[2025-12-18 07:39:08] 2025-12-18 06:38:13,916 | INFO     | mean x: 1766035138.5448718
[2025-12-18 07:39:08] 2025-12-18 06:38:13,916 | INFO     | mean y: 2366454.371794872
[2025-12-18 07:39:08] 2025-12-18 06:38:13,916 | INFO     | intersect: 3395013755.613287
[2025-12-18 07:39:08] 2025-12-18 06:38:13,916 | INFO     | chi2: 2.4406142215779054
[2025-12-18 07:39:08] 2025-12-18 06:38:13,917 | INFO     | sum of square deviations: 1067605334.6754953
[2025-12-18 07:39:08] 2025-12-18 06:38:13,917 | INFO     | sum of deviations: 7235021693.225169
[2025-12-18 07:39:08] 2025-12-18 06:38:13,917 | INFO     | mean x: 1766034986.0463576
[2025-12-18 07:39:08] 2025-12-18 06:38:13,917 | INFO     | mean y: 2379322.682119205
[2025-12-18 07:39:08] 2025-12-18 06:38:13,917 | INFO     | intersect: -11965808752.102781
[2025-12-18 07:39:08] 2025-12-18 06:38:13,917 | INFO     | chi2: 1.7192595186352144
[2025-12-18 07:39:08] 2025-12-18 06:38:13,917 | INFO     | current chi2=1.7192595186352144 (change=29.556277127497882 %)
[2025-12-18 07:39:08] 2025-12-18 06:38:13,918 | INFO     | sum of square deviations: 965028802.1643844
[2025-12-18 07:39:08] 2025-12-18 06:38:13,918 | INFO     | sum of deviations: 6994351443.82193
[2025-12-18 07:39:08] 2025-12-18 06:38:13,918 | INFO     | mean x: 1766034833.5479453
[2025-12-18 07:39:08] 2025-12-18 06:38:13,918 | INFO     | mean y: 2378964.7397260275
[2025-12-18 07:39:08] 2025-12-18 06:38:13,918 | INFO     | intersect: -12797517017.807116
[2025-12-18 07:39:08] 2025-12-18 06:38:13,918 | INFO     | chi2: 1.7208092966039994
[2025-12-18 07:39:08] 2025-12-18 06:38:13,918 | INFO     | current chi2=1.7208092966039994 (change=-0.09014217760534597 %)
[2025-12-18 07:39:08] 2025-12-18 06:38:13,918 | INFO     | right removable region: 145
[2025-12-18 07:39:08] 2025-12-18 06:38:13,919 | INFO     | sum of square deviations: 1067601064.6754953
[2025-12-18 07:39:08] 2025-12-18 06:38:13,919 | INFO     | sum of deviations: -24360132126.033104
[2025-12-18 07:39:08] 2025-12-18 06:38:13,919 | INFO     | mean x: 1766035291.0463576
[2025-12-18 07:39:08] 2025-12-18 06:38:13,919 | INFO     | mean y: 2396701.5761589403
[2025-12-18 07:39:08] 2025-12-18 06:38:13,919 | INFO     | intersect: 40299146538.74786
[2025-12-18 07:39:08] 2025-12-18 06:38:13,919 | INFO     | chi2: 0.9281286329339287
[2025-12-18 07:39:08] 2025-12-18 06:38:13,919 | INFO     | current chi2=0.9281286329339287 (change=61.971514189822464 %)
[2025-12-18 07:39:08] 2025-12-18 06:38:13,920 | INFO     | sum of square deviations: 965020262.1643844
[2025-12-18 07:39:08] 2025-12-18 06:38:13,920 | INFO     | sum of deviations: -17429473510.356163
[2025-12-18 07:39:08] 2025-12-18 06:38:13,920 | INFO     | mean x: 1766035443.5479453
[2025-12-18 07:39:08] 2025-12-18 06:38:13,920 | INFO     | mean y: 2386358.979452055
[2025-12-18 07:39:08] 2025-12-18 06:38:13,920 | INFO     | intersect: 31899196393.446556
[2025-12-18 07:39:08] 2025-12-18 06:38:13,920 | INFO     | chi2: 0.8802086259230677
[2025-12-18 07:39:08] 2025-12-18 06:38:13,920 | INFO     | current chi2=0.8802086259230677 (change=5.163078188782942 %)
[2025-12-18 07:39:08] 2025-12-18 06:38:13,920 | INFO     | left removable region: 20
[2025-12-18 07:39:08] 2025-12-18 06:38:13,921 | INFO     | sum of square deviations: 605637206.6079986
[2025-12-18 07:39:08] 2025-12-18 06:38:13,921 | INFO     | sum of deviations: 810990945.5919999
[2025-12-18 07:39:08] 2025-12-18 06:38:13,921 | INFO     | mean x: 1766035413.056
[2025-12-18 07:39:08] 2025-12-18 06:38:13,921 | INFO     | mean y: 2385165.344
[2025-12-18 07:39:08] 2025-12-18 06:38:13,921 | INFO     | intersect: -2362460841.401201
[2025-12-18 07:39:08] 2025-12-18 06:38:13,921 | INFO     | chi2: 0.0009415833360901718
[2025-12-18 07:39:08] 2025-12-18 06:38:13,921 | INFO     | current memory leak: 1.34 B/s (using 125 data points, chi2=0.00)
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | could have reported an average CPU frequency of 2400 MHz (9 samples)
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | ..............................
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | . Timing measurements:
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | . get job = 0 s
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | . initial setup = 5 s
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | . payload setup = 3 s
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | . stage-in = 0 s
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | . payload execution = 9476 s
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | . stage-out = 0 s
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | . log creation = 0 s
[2025-12-18 07:39:08] 2025-12-18 06:38:13,922 | INFO     | ..............................
[2025-12-18 07:39:08] 2025-12-18 06:38:13,969 | INFO     | 
[2025-12-18 07:39:08] 2025-12-18 06:38:13,969 | INFO     | job summary report
[2025-12-18 07:39:08] 2025-12-18 06:38:13,969 | INFO     | --------------------------------------------------
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | PanDA job id: 6932419057
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | task id: 47928836
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | errors: (none)
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | pilot state: finished 
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | transexitcode: 0
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | exeerrorcode: 0
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | exeerrordiag: 
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | exitcode: 0
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | exitmsg: OK
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | cpuconsumptiontime: 36456 s
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | nevents: 400
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | neventsw: 0
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | pid: 3209504
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | pgrp: 3209504
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | corecount: 4
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | event service: False
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | sizes: {0: 2284058, 3: 2284320, 11: 2284348, 9483: 2312900, 9484: 2321926, 9485: 2321982, 9489: 2322368}
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | --------------------------------------------------
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | 
[2025-12-18 07:39:08] 2025-12-18 06:38:13,970 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,982 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,983 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 07:39:08] 2025-12-18 06:38:13,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,983 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 07:39:08] 2025-12-18 06:38:13,983 | INFO     | job 6932419057 has completed (purged errors)
[2025-12-18 07:39:08] 2025-12-18 06:38:13,983 | INFO     | overall cleanup function is called
[2025-12-18 07:39:08] 2025-12-18 06:38:14,989 | INFO     | --- collectZombieJob: --- 10, [3209504]
[2025-12-18 07:39:08] 2025-12-18 06:38:14,989 | INFO     | zombie collector waiting for pid 3209504
[2025-12-18 07:39:08] 2025-12-18 06:38:14,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 07:39:08] 2025-12-18 06:38:14,989 | INFO     | collected zombie processes
[2025-12-18 07:39:08] 2025-12-18 06:38:14,989 | INFO     | will attempt to kill all subprocesses of pid=3209504
[2025-12-18 07:39:08] 2025-12-18 06:38:15,070 | INFO     | process IDs to be killed: [3209504] (in reverse order)
[2025-12-18 07:39:08] 2025-12-18 06:38:15,098 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 07:39:08] 2025-12-18 06:38:15,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 07:39:08] 2025-12-18 06:38:15,101 | INFO     | did not find any defunct processes belonging to 3209504
[2025-12-18 07:39:08] 2025-12-18 06:38:15,103 | INFO     | did not find any defunct processes belonging to 3209504
[2025-12-18 07:39:08] 2025-12-18 06:38:15,103 | INFO     | ready for new job
[2025-12-18 07:39:08] 2025-12-18 06:38:15,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 07:39:08] 2025-12-18 06:38:15,104 | INFO     | ***************************************
[2025-12-18 07:39:08] 2025-12-18 06:38:15,104 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 07:39:08] 2025-12-18 06:38:15,104 | INFO     | ***************************************
[2025-12-18 07:39:08] 2025-12-18 06:38:15,104 | INFO     | 
[2025-12-18 07:39:08] 2025-12-18 06:38:15,104 | INFO     | pilot is running in a VM
[2025-12-18 07:39:08] 2025-12-18 06:38:15,104 | INFO     | architecture information:
[2025-12-18 07:39:08] 2025-12-18 06:38:15,105 | INFO     | executing command: cat /etc/os-release
[2025-12-18 07:39:08] 2025-12-18 06:38:15,117 | INFO     | cat /etc/os-release:
[2025-12-18 07:39:08] NAME="CentOS Linux"
[2025-12-18 07:39:08] VERSION="7 (Core)"
[2025-12-18 07:39:08] ID="centos"
[2025-12-18 07:39:08] ID_LIKE="rhel fedora"
[2025-12-18 07:39:08] VERSION_ID="7"
[2025-12-18 07:39:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 07:39:08] ANSI_COLOR="0;31"
[2025-12-18 07:39:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 07:39:08] HOME_URL="https://www.centos.org/"
[2025-12-18 07:39:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 07:39:08] 
[2025-12-18 07:39:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 07:39:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 07:39:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 07:39:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 07:39:08] 
[2025-12-18 07:39:08] 2025-12-18 06:38:15,117 | INFO     | ***************************************
[2025-12-18 07:39:08] 2025-12-18 06:38:15,620 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2025-12-18 07:39:08] 2025-12-18 06:38:15,633 | INFO     | sufficient remaining disk space (157351411712 B)
[2025-12-18 07:39:08] 2025-12-18 06:38:15,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 07:39:08] 2025-12-18 06:38:15,633 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 07:39:08] 2025-12-18 06:38:15,633 | INFO     | update_server=False
[2025-12-18 07:39:08] 2025-12-18 06:38:15,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 07:39:08] 2025-12-18 06:38:15,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 07:39:08] 2025-12-18 06:38:15,972 | INFO     | all payload control threads have been joined
[2025-12-18 07:39:08] 2025-12-18 06:38:16,255 | INFO     | all job control threads have been joined
[2025-12-18 07:39:08] 2025-12-18 06:38:16,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 07:39:08] 2025-12-18 06:38:16,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 07:39:08] 2025-12-18 06:38:16,472 | INFO     | aborting loop
[2025-12-18 07:39:08] 2025-12-18 06:38:16,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 07:39:08] 2025-12-18 06:38:16,537 | INFO     | all data control threads have been joined
[2025-12-18 07:39:08] 2025-12-18 06:38:16,639 | INFO     | [job] retrieve thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:16,639 | INFO     | [job] queue monitor thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:16,763 | INFO     | [data] copytool_in thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:16,953 | INFO     | [payload] validate_post thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:16,978 | INFO     | [payload] control thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:17,047 | INFO     | [payload] failed_post thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:17,094 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:17,260 | INFO     | [job] control thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:17,452 | INFO     | [job] validate thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:17,477 | INFO     | [job] job monitor thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:17,542 | INFO     | [data] control thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:17,899 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:18,080 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:18,532 | INFO     | [data] copytool_out thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:20,370 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:26,680 | INFO     | job.realtimelogging is not enabled
[2025-12-18 07:39:08] 2025-12-18 06:38:27,683 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 07:39:08] 2025-12-18 06:38:46,125 | INFO     | PID=3202961 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 07:39:08] 2025-12-18 06:38:46,126 | INFO     | .. there are 3 such processes running
[2025-12-18 07:39:08] 2025-12-18 06:38:46,126 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 07:39:08] 2025-12-18 06:38:46,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 07:39:08] 2025-12-18 06:38:46,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 07:39:08] 2025-12-18 06:39:02,753 | INFO     | [monitor] cgroup control has ended
[2025-12-18 07:39:08] 2025-12-18 06:39:02,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130669553977152)>', '<ExcThread(monitor, started 130669069985536)>']
[2025-12-18 07:39:08] 2025-12-18 06:39:03,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 07:39:08] 2025-12-18 06:39:03,214 | INFO     | [monitor] control thread has ended
[2025-12-18 07:39:08] 2025-12-18 06:39:07,979 | INFO     | all workflow threads have been joined
[2025-12-18 07:39:08] 2025-12-18 06:39:07,980 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 07:39:08] 2025-12-18 06:39:07,980 | INFO     | traces error code: 0
[2025-12-18 07:39:08] 2025-12-18 06:39:07,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 07:39:08] 2025-12-18 06:39:08,050 [wrapper] ==== pilot stdout END ====
[2025-12-18 07:39:08] 2025-12-18 06:39:08,052 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 07:39:08] 2025-12-18 06:39:08,054 [wrapper] pilotpid: 3202961
[2025-12-18 07:39:08] 2025-12-18 06:39:08,056 [wrapper] Pilot exit status: 0
[2025-12-18 07:39:08] 2025-12-18 06:39:08,062 [wrapper] pandaids: 6932419057
[2025-12-18 07:39:08] 2025-12-18 06:39:08,083 [wrapper] cleanup supervisor_pilot 3264864 3202962
[2025-12-18 07:39:08] 2025-12-18 06:39:08,085 [wrapper] Test setup, not cleaning
[2025-12-18 07:39:08] 2025-12-18 06:39:08,088 [wrapper] apfmon messages muted
[2025-12-18 07:39:08] 2025-12-18 06:39:08,089 [wrapper] ==== wrapper stdout END ====
[2025-12-18 07:39:08] 2025-12-18 06:39:08,091 [wrapper] ==== wrapper stderr END ====
[2025-12-18 07:39:08]  *** Error codes and diagnostics ***
[2025-12-18 07:39:08]     "exeErrorCode": 0,
[2025-12-18 07:39:08]     "exeErrorDiag": "",
[2025-12-18 07:39:08]     "pilotErrorCode": 0,
[2025-12-18 07:39:08]     "pilotErrorDiag": "",
[2025-12-18 07:39:08]  *** Listing of results directory ***
[2025-12-18 07:39:08] insgesamt 656152
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc    579449 Dez 17 15:12 pilot3.tar.gz
[2025-12-18 07:39:08] -rwx------ 1 yeti boinc     36322 Dez 17 15:14 runpilot2-wrapper.sh
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc      5112 Dez 17 15:14 queuedata.json
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc       100 Dez 18 04:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 07:39:08] -rwxr-xr-x 1 yeti boinc      7986 Dez 18 04:59 run_atlas
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc       105 Dez 18 04:59 job.xml
[2025-12-18 07:39:08] -rw-r--r-- 2 yeti boinc 341830304 Dez 18 04:59 EVNT.47928834._000006.pool.root.1
[2025-12-18 07:39:08] -rw-r--r-- 2 yeti boinc     15847 Dez 18 04:59 start_atlas.sh
[2025-12-18 07:39:08] drwxrwx--x 2 yeti boinc      4096 Dez 18 04:59 shared
[2025-12-18 07:39:08] -rw-r--r-- 2 yeti boinc    592404 Dez 18 04:59 input.tar.gz
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc      6594 Dez 18 04:59 init_data.xml
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc         0 Dez 18 04:59 boinc_setup_complete
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc         0 Dez 18 04:59 boinc_lockfile
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc      2574 Dez 18 04:59 pandaJob.out
[2025-12-18 07:39:08] -rw------- 1 yeti boinc    988118 Dez 18 04:59 agis_schedconf.cvmfs.json
[2025-12-18 07:39:08] -rw------- 1 yeti boinc   1516240 Dez 18 04:59 agis_ddmendpoints.agis.ALL.json
[2025-12-18 07:39:08] drwx------ 5 yeti boinc      4096 Dez 18 04:59 pilot3
[2025-12-18 07:39:08] -rw------- 1 yeti boinc 322684783 Dez 18 07:37 HITS.47928836._000136.pool.root.1
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc       530 Dez 18 07:37 boinc_task_state.xml
[2025-12-18 07:39:08] -rw------- 1 yeti boinc        95 Dez 18 07:37 pilot_heartbeat.json
[2025-12-18 07:39:08] -rw------- 1 yeti boinc      1024 Dez 18 07:38 memory_monitor_summary.json
[2025-12-18 07:39:08] -rw------- 1 yeti boinc    337217 Dez 18 07:38 log.47928836._000136.job.log.tgz.1
[2025-12-18 07:39:08] -rw------- 1 yeti boinc      7762 Dez 18 07:38 heartbeat.json
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc        27 Dez 18 07:39 wrapper_checkpoint.txt
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc      8192 Dez 18 07:39 boinc_mmap_file
[2025-12-18 07:39:08] -rw------- 1 yeti boinc      4972 Dez 18 07:39 pilotlog.txt
[2025-12-18 07:39:08] -rw------- 1 yeti boinc   1397427 Dez 18 07:39 log.47928836._000136.job.log.1
[2025-12-18 07:39:08] -rw------- 1 yeti boinc       357 Dez 18 07:39 output.list
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc       620 Dez 18 07:39 runtime_log
[2025-12-18 07:39:08] -rw------- 1 yeti boinc   1751040 Dez 18 07:39 result.tar.gz
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc      9017 Dez 18 07:39 runtime_log.err
[2025-12-18 07:39:08] -rw------- 1 yeti boinc       640 Dez 18 07:39 24kKDmFT7p8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmncXKDmqvC0No.diag
[2025-12-18 07:39:08] -rw-r--r-- 1 yeti boinc     20810 Dez 18 07:39 stderr.txt
[2025-12-18 07:39:08] HITS file was successfully produced:
[2025-12-18 07:39:08] -rw------- 1 yeti boinc 322684783 Dez 18 07:37 shared/HITS.pool.root.1
[2025-12-18 07:39:08]  *** Contents of shared directory: ***
[2025-12-18 07:39:08] insgesamt 651260
[2025-12-18 07:39:08] -rw-r--r-- 2 yeti boinc 341830304 Dez 18 04:59 ATLAS.root_0
[2025-12-18 07:39:08] -rw-r--r-- 2 yeti boinc     15847 Dez 18 04:59 start_atlas.sh
[2025-12-18 07:39:08] -rw-r--r-- 2 yeti boinc    592404 Dez 18 04:59 input.tar.gz
[2025-12-18 07:39:08] -rw------- 1 yeti boinc 322684783 Dez 18 07:37 HITS.pool.root.1
[2025-12-18 07:39:08] -rw------- 1 yeti boinc   1751040 Dez 18 07:39 result.tar.gz
07:39:09 (3199165): run_atlas exited; CPU time 36576.105111
07:39:09 (3199165): called boinc_finish(0)

</stderr_txt>
]]>

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