Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:40:47 (1856635): wrapper (7.7.26015): starting
09:40:47 (1856635): wrapper: running run_atlas (--nthreads 3)
[2025-12-18 09:40:47] Arguments: --nthreads 3
[2025-12-18 09:40:47] Threads: 3
[2025-12-18 09:40:47] Checking for CVMFS
[2025-12-18 09:40:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 09:40:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 09:40:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 09:40:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 09:40:48] 2.9.2.0 19183 7413 71536 154141 3 56 32333679 36864000 0 130560 0 4842685 99.989 269676 8252 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 09:40:48] CVMFS is ok
[2025-12-18 09:40:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 09:40:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 09:40:48] Further information can be found at the LHC@home message board.
[2025-12-18 09:40:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 09:40:48] Checking for apptainer binary...
[2025-12-18 09:40:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 09:40:48] Running /usr/bin/apptainer --version
[2025-12-18 09:40:48] apptainer version 1.4.1-1.1
[2025-12-18 09:40:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 09:40:48] magicA244b
[2025-12-18 09:40:48] apptainer works
[2025-12-18 09:40:48] Set ATHENA_PROC_NUMBER=3
[2025-12-18 09:40:48] Set ATHENA_CORE_NUMBER=3
[2025-12-18 09:40:48] Starting ATLAS job with PandaID=6932419633
[2025-12-18 09:40:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 11:42:15]  *** The last 200 lines of the pilot log: ***
[2025-12-18 11:42:15] 2025-12-18 10:41:41,358 | INFO     | did not find any defunct processes belonging to 1866822
[2025-12-18 11:42:15] 2025-12-18 10:41:41,359 | INFO     | did not find any defunct processes belonging to 1866822
[2025-12-18 11:42:15] 2025-12-18 10:41:41,359 | INFO     | ready for new job
[2025-12-18 11:42:15] 2025-12-18 10:41:41,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 11:42:15] 2025-12-18 10:41:41,360 | INFO     | ***************************************
[2025-12-18 11:42:15] 2025-12-18 10:41:41,360 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 11:42:15] 2025-12-18 10:41:41,360 | INFO     | ***************************************
[2025-12-18 11:42:15] 2025-12-18 10:41:41,360 | INFO     | 
[2025-12-18 11:42:15] 2025-12-18 10:41:41,360 | INFO     | architecture information:
[2025-12-18 11:42:15] 2025-12-18 10:41:41,360 | INFO     | executing command: cat /etc/os-release
[2025-12-18 11:42:15] 2025-12-18 10:41:41,371 | INFO     | cat /etc/os-release:
[2025-12-18 11:42:15] NAME="CentOS Linux"
[2025-12-18 11:42:15] VERSION="7 (Core)"
[2025-12-18 11:42:15] ID="centos"
[2025-12-18 11:42:15] ID_LIKE="rhel fedora"
[2025-12-18 11:42:15] VERSION_ID="7"
[2025-12-18 11:42:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 11:42:15] ANSI_COLOR="0;31"
[2025-12-18 11:42:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 11:42:15] HOME_URL="https://www.centos.org/"
[2025-12-18 11:42:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 11:42:15] 
[2025-12-18 11:42:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 11:42:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 11:42:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 11:42:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 11:42:15] 
[2025-12-18 11:42:15] 2025-12-18 10:41:41,371 | INFO     | ***************************************
[2025-12-18 11:42:15] 2025-12-18 10:41:41,875 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-18 11:42:15] 2025-12-18 10:41:41,888 | INFO     | sufficient remaining disk space (327739768832 B)
[2025-12-18 11:42:15] 2025-12-18 10:41:41,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 11:42:15] 2025-12-18 10:41:41,889 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 11:42:15] 2025-12-18 10:41:41,889 | INFO     | update_server=False
[2025-12-18 11:42:15] 2025-12-18 10:41:41,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 11:42:15] 2025-12-18 10:41:41,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 11:42:15] 2025-12-18 10:41:41,889 | INFO     | aborting loop
[2025-12-18 11:42:15] 2025-12-18 10:41:41,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 11:42:15] 2025-12-18 10:41:41,995 | INFO     | all payload control threads have been joined
[2025-12-18 11:42:15] 2025-12-18 10:41:41,995 | INFO     | all job control threads have been joined
[2025-12-18 11:42:15] 2025-12-18 10:41:42,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 11:42:15] 2025-12-18 10:41:42,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 11:42:15] 2025-12-18 10:41:42,762 | INFO     | all data control threads have been joined
[2025-12-18 11:42:15] 2025-12-18 10:41:42,895 | INFO     | [job] retrieve thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:42,895 | INFO     | [job] job monitor thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:42,896 | INFO     | [job] queue monitor thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:43,001 | INFO     | [payload] control thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:43,002 | INFO     | [job] control thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:43,073 | INFO     | [data] copytool_in thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:43,106 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:43,768 | INFO     | [data] control thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:43,833 | INFO     | [payload] validate_post thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:43,938 | INFO     | [job] validate thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:44,193 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:44,293 | INFO     | [payload] failed_post thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:44,311 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:44,446 | INFO     | [data] copytool_out thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:46,470 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:41:52,760 | INFO     | job.realtimelogging is not enabled
[2025-12-18 11:42:15] 2025-12-18 10:41:53,765 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 11:42:15] 2025-12-18 10:42:08,331 | INFO     | [monitor] cgroup control has ended
[2025-12-18 11:42:15] 2025-12-18 10:42:10,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117971187520)>', '<ExcThread(monitor, started 140117268231936)>']
[2025-12-18 11:42:15] 2025-12-18 10:42:11,852 | INFO     | PID=1860365 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 11:42:15] 2025-12-18 10:42:11,852 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 11:42:15] 2025-12-18 10:42:11,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 11:42:15] 2025-12-18 10:42:11,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 11:42:15] 2025-12-18 10:42:11,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 11:42:15] 2025-12-18 10:42:11,852 | INFO     | [monitor] control thread has ended
[2025-12-18 11:42:15] 2025-12-18 10:42:15,039 | INFO     | all workflow threads have been joined
[2025-12-18 11:42:15] 2025-12-18 10:42:15,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 11:42:15] 2025-12-18 10:42:15,040 | INFO     | traces error code: 0
[2025-12-18 11:42:15] 2025-12-18 10:42:15,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 11:42:15] 2025-12-18 10:42:15,084 [wrapper] ==== pilot stdout END ====
[2025-12-18 11:42:15] 2025-12-18 10:42:15,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 11:42:15] 2025-12-18 10:42:15,090 [wrapper] pilotpid: 1860365
[2025-12-18 11:42:15] 2025-12-18 10:42:15,092 [wrapper] Pilot exit status: 0
[2025-12-18 11:42:15] 2025-12-18 10:42:15,100 [wrapper] pandaids: 6932419633
[2025-12-18 11:42:15] 2025-12-18 10:42:15,115 [wrapper] cleanup supervisor_pilot 1881299 1860366
[2025-12-18 11:42:15] 2025-12-18 10:42:15,117 [wrapper] Test setup, not cleaning
[2025-12-18 11:42:15] 2025-12-18 10:42:15,120 [wrapper] apfmon messages muted
[2025-12-18 11:42:15] 2025-12-18 10:42:15,122 [wrapper] ==== wrapper stdout END ====
[2025-12-18 11:42:15] 2025-12-18 10:42:15,124 [wrapper] ==== wrapper stderr END ====
[2025-12-18 11:42:15]  *** Error codes and diagnostics ***
[2025-12-18 11:42:15]     "exeErrorCode": 0,
[2025-12-18 11:42:15]     "exeErrorDiag": "",
[2025-12-18 11:42:15]     "pilotErrorCode": 0,
[2025-12-18 11:42:15]     "pilotErrorDiag": "",
[2025-12-18 11:42:15]  *** Listing of results directory ***
[2025-12-18 11:42:15] total 403068
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc    579449 Dec 17 15:12 pilot3.tar.gz
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc      5112 Dec 17 15:12 queuedata.json
[2025-12-18 11:42:15] -rwx------ 1 boinc boinc     36322 Dec 17 15:12 runpilot2-wrapper.sh
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc       100 Dec 18 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 11:42:15] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 09:40 run_atlas
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc       105 Dec 18 09:40 job.xml
[2025-12-18 11:42:15] -rw-r--r-- 2 boinc boinc 215004664 Dec 18 09:40 EVNT.47898833._000172.pool.root.1
[2025-12-18 11:42:15] -rw-r--r-- 2 boinc boinc    592396 Dec 18 09:40 input.tar.gz
[2025-12-18 11:42:15] -rw-r--r-- 2 boinc boinc     15847 Dec 18 09:40 start_atlas.sh
[2025-12-18 11:42:15] drwxrwx--x 2 boinc boinc      4096 Dec 18 09:40 shared
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc         0 Dec 18 09:40 boinc_setup_complete
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc      6199 Dec 18 09:40 init_data.xml
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc         0 Dec 18 09:40 boinc_lockfile
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc      2552 Dec 18 09:40 pandaJob.out
[2025-12-18 11:42:15] -rw------- 1 boinc boinc    988125 Dec 18 09:40 agis_schedconf.cvmfs.json
[2025-12-18 11:42:15] -rw------- 1 boinc boinc   1516240 Dec 18 09:40 agis_ddmendpoints.agis.ALL.json
[2025-12-18 11:42:15] drwx------ 5 boinc boinc      4096 Dec 18 09:40 pilot3
[2025-12-18 11:42:15] -rw------- 1 boinc boinc 191164537 Dec 18 11:41 HITS.47898836._004430.pool.root.1
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc       529 Dec 18 11:41 boinc_task_state.xml
[2025-12-18 11:42:15] -rw------- 1 boinc boinc      1015 Dec 18 11:41 memory_monitor_summary.json
[2025-12-18 11:42:15] -rw------- 1 boinc boinc        95 Dec 18 11:41 pilot_heartbeat.json
[2025-12-18 11:42:15] -rw------- 1 boinc boinc    293350 Dec 18 11:41 log.47898836._004430.job.log.tgz.1
[2025-12-18 11:42:15] -rw------- 1 boinc boinc      7753 Dec 18 11:41 heartbeat.json
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc      8192 Dec 18 11:42 boinc_mmap_file
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc        27 Dec 18 11:42 wrapper_checkpoint.txt
[2025-12-18 11:42:15] -rw------- 1 boinc boinc      4824 Dec 18 11:42 pilotlog.txt
[2025-12-18 11:42:15] -rw------- 1 boinc boinc   1040762 Dec 18 11:42 log.47898836._004430.job.log.1
[2025-12-18 11:42:15] -rw------- 1 boinc boinc       357 Dec 18 11:42 output.list
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc       620 Dec 18 11:42 runtime_log
[2025-12-18 11:42:15] -rw------- 1 boinc boinc   1351680 Dec 18 11:42 result.tar.gz
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc      8917 Dec 18 11:42 runtime_log.err
[2025-12-18 11:42:15] -rw------- 1 boinc boinc       663 Dec 18 11:42 N69LDm2R7p8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAYXKDmtwT6Cn.diag
[2025-12-18 11:42:15] -rw-r--r-- 1 boinc boinc      9852 Dec 18 11:42 stderr.txt
[2025-12-18 11:42:15] HITS file was successfully produced:
[2025-12-18 11:42:15] -rw------- 1 boinc boinc 191164537 Dec 18 11:41 shared/HITS.pool.root.1
[2025-12-18 11:42:15]  *** Contents of shared directory: ***
[2025-12-18 11:42:15] total 398580
[2025-12-18 11:42:15] -rw-r--r-- 2 boinc boinc 215004664 Dec 18 09:40 ATLAS.root_0
[2025-12-18 11:42:15] -rw-r--r-- 2 boinc boinc    592396 Dec 18 09:40 input.tar.gz
[2025-12-18 11:42:15] -rw-r--r-- 2 boinc boinc     15847 Dec 18 09:40 start_atlas.sh
[2025-12-18 11:42:15] -rw------- 1 boinc boinc 191164537 Dec 18 11:41 HITS.pool.root.1
[2025-12-18 11:42:15] -rw------- 1 boinc boinc   1351680 Dec 18 11:42 result.tar.gz
11:42:16 (1856635): run_atlas exited; CPU time 20908.948892
11:42:16 (1856635): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN