Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:00:05 (4013): wrapper (7.7.26015): starting
22:00:05 (4013): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 22:00:05] Arguments: --nthreads 8
[2025-12-17 22:00:05] Threads: 8
[2025-12-17 22:00:05] Checking for CVMFS
[2025-12-17 22:00:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 22:00:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 22:00:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 22:00:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 22:00:05] 2.11.0.0 4301 19448 63180 154122 0 188 2520671 4096001 1825 130560 1 2036808 99.649 1291625 459 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-12-17 22:00:05] CVMFS is ok
[2025-12-17 22:00:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 22:00:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 22:00:05] Further information can be found at the LHC@home message board.
[2025-12-17 22:00:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 22:00:05] Checking for apptainer binary...
[2025-12-17 22:00:05] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-12-17 22:00:05] apptainer is not installed, using version from CVMFS
[2025-12-17 22:00:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 22:00:05] WARNING: Environment variable TMPDIR already has value [/tmp/job_10984865/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node178
[2025-12-17 22:00:05] apptainer works
[2025-12-17 22:00:05] Set ATHENA_PROC_NUMBER=8
[2025-12-17 22:00:05] Set ATHENA_CORE_NUMBER=8
[2025-12-17 22:00:05] Starting ATLAS job with PandaID=6931734517
[2025-12-17 22:00:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10984865/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 23:07:39]  *** The last 200 lines of the pilot log: ***
[2025-12-17 23:07:39]  replicas=None
[2025-12-17 23:07:39]  scope=mc23_13p6TeV
[2025-12-17 23:07:39]  status=None
[2025-12-17 23:07:39]  status_code=0
[2025-12-17 23:07:39]  storage_token=
[2025-12-17 23:07:39]  surl=/tmp/job_10984865/atlas/pilot/slots/0/PanDA_Pilot-6931734517/log.47898763._020551.job.log.tgz.1
[2025-12-17 23:07:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/d6/log.47898763._020551.job.log.tgz.1
[2025-12-17 23:07:39]  workdir=None
[2025-12-17 23:07:39] ]
[2025-12-17 23:07:39] 2025-12-17 22:07:03,217 | INFO     | transferring file log.47898763._020551.job.log.tgz.1 from /tmp/job_10984865/atlas/pilot/slots/0/PanDA_Pilot-6931734517/log.47898763._020551.job.log.tgz.1 to /tmp/j
[2025-12-17 23:07:39] 2025-12-17 22:07:03,217 | INFO     | executing command: /usr/bin/env mv /tmp/job_10984865/atlas/pilot/slots/0/PanDA_Pilot-6931734517/log.47898763._020551.job.log.tgz.1 /tmp/job_10984865/atlas/pilot/sl
[2025-12-17 23:07:39] 2025-12-17 22:07:03,225 | INFO     | adding to output.list: log.47898763._020551.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/d6/log.47898763._020551.job.log.tg
[2025-12-17 23:07:39] 2025-12-17 22:07:03,225 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 23:07:39] 2025-12-17 22:07:03,225 | INFO     | summary of transferred files:
[2025-12-17 23:07:39] 2025-12-17 22:07:03,225 | INFO     |  -- lfn=log.47898763._020551.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 23:07:39] 2025-12-17 22:07:03,225 | INFO     | stage-out finished correctly
[2025-12-17 23:07:39] 2025-12-17 22:07:03,584 | INFO     | PID=7868 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-17 23:07:39] 2025-12-17 22:07:03,584 | INFO     | .. there are 3 such processes running
[2025-12-17 23:07:39] 2025-12-17 22:07:04,505 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 23:07:39] 2025-12-17 22:07:04,584 | INFO     | time since job start (4014s) is within the limit (174528.0s)
[2025-12-17 23:07:39] 2025-12-17 22:07:04,585 | INFO     | 4014s have passed since pilot start - server update state is 'RUNNING'
[2025-12-17 23:07:39] 2025-12-17 22:07:04,817 | INFO     | monitor loop #299: job 0:6931734517 is in state 'finished'
[2025-12-17 23:07:39] 2025-12-17 22:07:04,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 23:07:39] 2025-12-17 22:07:06,269 | INFO     | job 6931734517 has state=finished
[2025-12-17 23:07:39] 2025-12-17 22:07:06,269 | INFO     | preparing for final server update for job 6931734517 in state='finished'
[2025-12-17 23:07:39] 2025-12-17 22:07:06,269 | INFO     | this job has now completed (state=finished)
[2025-12-17 23:07:39] 2025-12-17 22:07:06,269 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 23:07:39] 2025-12-17 22:07:06,269 | INFO     | log transfer has been attempted: DONE
[2025-12-17 23:07:39] 2025-12-17 22:07:06,270 | INFO     | job 6931734517 has finished - writing final server update
[2025-12-17 23:07:39] 2025-12-17 22:07:06,270 | INFO     | total number of processed events: 400 (read)
[2025-12-17 23:07:39] 2025-12-17 22:07:06,270 | INFO     | executing command: lscpu
[2025-12-17 23:07:39] 2025-12-17 22:07:06,301 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 23:07:39] 2025-12-17 22:07:06,590 | INFO     | time since job start (4016s) is within the limit (174528.0s)
[2025-12-17 23:07:39] 2025-12-17 22:07:07,320 | INFO     | monitor loop #300: job 0:6931734517 is in state 'finished'
[2025-12-17 23:07:39] 2025-12-17 22:07:07,320 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 23:07:39] 2025-12-17 22:07:07,906 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 23:07:39] 2025-12-17 22:07:07,910 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2629.3876874999996
[2025-12-17 23:07:39] 2025-12-17 22:07:07,915 | INFO     | using path: /tmp/job_10984865/atlas/pilot/slots/0/PanDA_Pilot-6931734517/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 23:07:39] 2025-12-17 22:07:07,915 | INFO     | extracted standard info from prmon json
[2025-12-17 23:07:39] 2025-12-17 22:07:07,915 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 23:07:39] 2025-12-17 22:07:07,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 23:07:39] 2025-12-17 22:07:07,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 23:07:39] 2025-12-17 22:07:07,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 23:07:39] 2025-12-17 22:07:07,916 | INFO     | fitting pss+swap vs Time
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | sum of square deviations: 63666310.0
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | sum of deviations: -1620768841.0
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | mean x: 1766007302.0
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | mean y: 2547181.966101695
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | intersect: 44960227437.97712
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | chi2: 0.013135696737590444
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | current memory leak: -25.46 B/s (using 59 data points, chi2=0.01)
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | could have reported an average CPU frequency of 2623 MHz (6 samples)
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | ..............................
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | . Timing measurements:
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | . get job = 0 s
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | . initial setup = 1 s
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | . payload setup = 2 s
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | . stage-in = 0 s
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | . payload execution = 3992 s
[2025-12-17 23:07:39] 2025-12-17 22:07:07,917 | INFO     | . stage-out = 0 s
[2025-12-17 23:07:39] 2025-12-17 22:07:07,918 | INFO     | . log creation = 0 s
[2025-12-17 23:07:39] 2025-12-17 22:07:07,918 | INFO     | ..............................
[2025-12-17 23:07:39] 2025-12-17 22:07:07,965 | INFO     | 
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | job summary report
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | --------------------------------------------------
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | PanDA job id: 6931734517
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | task id: 47898763
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | errors: (none)
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | pilot state: finished 
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | transexitcode: 0
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | exeerrorcode: 0
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | exeerrordiag: 
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | exitcode: 0
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | exitmsg: OK
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | cpuconsumptiontime: 29157 s
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | nevents: 400
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | neventsw: 0
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | pid: 14561
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | pgrp: 14561
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | corecount: 8
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | event service: False
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | sizes: {0: 2284084, 2: 2284346, 11: 2284374, 3998: 2310405, 4000: 2319433, 4001: 2319489, 4004: 2319811}
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | --------------------------------------------------
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | 
[2025-12-17 23:07:39] 2025-12-17 22:07:07,966 | INFO     | executing command: ls -lF /tmp/job_10984865/atlas/pilot/slots/0
[2025-12-17 23:07:39] 2025-12-17 22:07:07,975 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | job 6931734517 has completed (purged errors)
[2025-12-17 23:07:39] 2025-12-17 22:07:07,976 | INFO     | overall cleanup function is called
[2025-12-17 23:07:39] 2025-12-17 22:07:08,982 | INFO     | --- collectZombieJob: --- 10, [14561]
[2025-12-17 23:07:39] 2025-12-17 22:07:08,982 | INFO     | zombie collector waiting for pid 14561
[2025-12-17 23:07:39] 2025-12-17 22:07:08,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 23:07:39] 2025-12-17 22:07:08,982 | INFO     | collected zombie processes
[2025-12-17 23:07:39] 2025-12-17 22:07:08,982 | INFO     | will attempt to kill all subprocesses of pid=14561
[2025-12-17 23:07:39] 2025-12-17 22:07:09,078 | INFO     | process IDs to be killed: [14561] (in reverse order)
[2025-12-17 23:07:39] 2025-12-17 22:07:09,112 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 23:07:39] 2025-12-17 22:07:09,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 23:07:39] 2025-12-17 22:07:09,115 | INFO     | did not find any defunct processes belonging to 14561
[2025-12-17 23:07:39] 2025-12-17 22:07:09,118 | INFO     | did not find any defunct processes belonging to 14561
[2025-12-17 23:07:39] 2025-12-17 22:07:09,118 | INFO     | ready for new job
[2025-12-17 23:07:39] 2025-12-17 22:07:09,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 23:07:39] 2025-12-17 22:07:09,119 | INFO     | ***************************************
[2025-12-17 23:07:39] 2025-12-17 22:07:09,119 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 23:07:39] 2025-12-17 22:07:09,119 | INFO     | ***************************************
[2025-12-17 23:07:39] 2025-12-17 22:07:09,119 | INFO     | 
[2025-12-17 23:07:39] 2025-12-17 22:07:09,133 | INFO     | architecture information:
[2025-12-17 23:07:39] 2025-12-17 22:07:09,133 | INFO     | executing command: cat /etc/os-release
[2025-12-17 23:07:39] 2025-12-17 22:07:09,139 | INFO     | cat /etc/os-release:
[2025-12-17 23:07:39] NAME="CentOS Linux"
[2025-12-17 23:07:39] VERSION="7 (Core)"
[2025-12-17 23:07:39] ID="centos"
[2025-12-17 23:07:39] ID_LIKE="rhel fedora"
[2025-12-17 23:07:39] VERSION_ID="7"
[2025-12-17 23:07:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 23:07:39] ANSI_COLOR="0;31"
[2025-12-17 23:07:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 23:07:39] HOME_URL="https://www.centos.org/"
[2025-12-17 23:07:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 23:07:39] 
[2025-12-17 23:07:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 23:07:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 23:07:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 23:07:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 23:07:39] 
[2025-12-17 23:07:39] 2025-12-17 22:07:09,139 | INFO     | ***************************************
[2025-12-17 23:07:39] 2025-12-17 22:07:09,642 | INFO     | executing command: df -mP /tmp/job_10984865/atlas/pilot/slots/0
[2025-12-17 23:07:39] 2025-12-17 22:07:09,649 | INFO     | sufficient remaining disk space (226996781056 B)
[2025-12-17 23:07:39] 2025-12-17 22:07:09,649 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 23:07:39] 2025-12-17 22:07:09,649 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 23:07:39] 2025-12-17 22:07:09,649 | INFO     | update_server=False
[2025-12-17 23:07:39] 2025-12-17 22:07:09,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 23:07:39] 2025-12-17 22:07:09,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 23:07:39] 2025-12-17 22:07:09,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 23:07:39] 2025-12-17 22:07:09,788 | INFO     | all data control threads have been joined
[2025-12-17 23:07:39] 2025-12-17 22:07:09,823 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 23:07:39] 2025-12-17 22:07:09,823 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 23:07:39] 2025-12-17 22:07:09,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 23:07:39] 2025-12-17 22:07:09,823 | INFO     | will abort loop
[2025-12-17 23:07:39] 2025-12-17 22:07:10,188 | INFO     | all payload control threads have been joined
[2025-12-17 23:07:39] 2025-12-17 22:07:10,382 | INFO     | all job control threads have been joined
[2025-12-17 23:07:39] 2025-12-17 22:07:10,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 23:07:39] 2025-12-17 22:07:10,654 | INFO     | [job] retrieve thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:10,654 | INFO     | [job] queue monitor thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:10,793 | INFO     | [data] control thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:10,828 | INFO     | [job] job monitor thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:11,015 | INFO     | [job] validate thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:11,036 | INFO     | [payload] failed_post thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:11,193 | INFO     | [payload] control thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:11,232 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:11,380 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:11,387 | INFO     | [job] control thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:11,567 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:11,654 | INFO     | [data] copytool_out thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:11,750 | INFO     | [data] copytool_in thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:12,226 | INFO     | [payload] validate_post thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:14,563 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:16,635 | INFO     | [monitor] cgroup control has ended
[2025-12-17 23:07:39] 2025-12-17 22:07:19,911 | INFO     | job.realtimelogging is not enabled
[2025-12-17 23:07:39] 2025-12-17 22:07:20,916 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 23:07:39] 2025-12-17 22:07:22,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2025-12-17 23:07:39] 2025-12-17 22:07:27,316 | INFO     | all workflow threads have been joined
[2025-12-17 23:07:39] 2025-12-17 22:07:27,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 23:07:39] 2025-12-17 22:07:27,316 | INFO     | traces error code: 0
[2025-12-17 23:07:39] 2025-12-17 22:07:27,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 23:07:39] 2025-12-17 22:07:39,769 | INFO     | PID=7868 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-17 23:07:39] 2025-12-17 22:07:39,769 | INFO     | .. there are 3 such processes running
[2025-12-17 23:07:39] 2025-12-17 22:07:39,769 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 23:07:39] 2025-12-17 22:07:39,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 23:07:39] 2025-12-17 22:07:39,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 23:07:39] 2025-12-17 22:07:39,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 23:07:39] 2025-12-17 22:07:39,769 | INFO     | [monitor] control thread has ended
[2025-12-17 23:07:39] 2025-12-17 22:07:39,822 [wrapper] ==== pilot stdout END ====
[2025-12-17 23:07:39] 2025-12-17 22:07:39,823 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 23:07:39] 2025-12-17 22:07:39,824 [wrapper] pilotpid: 7868
[2025-12-17 23:07:39] 2025-12-17 22:07:39,825 [wrapper] Pilot exit status: 0
[2025-12-17 23:07:39] 2025-12-17 22:07:39,829 [wrapper] pandaids: 6931734517
[2025-12-17 23:07:39] 2025-12-17 22:07:39,851 [wrapper] cleanup supervisor_pilot 18671 7869
[2025-12-17 23:07:39] 2025-12-17 22:07:39,852 [wrapper] Test setup, not cleaning
[2025-12-17 23:07:39] 2025-12-17 22:07:39,853 [wrapper] apfmon messages muted
[2025-12-17 23:07:39] 2025-12-17 22:07:39,854 [wrapper] ==== wrapper stdout END ====
[2025-12-17 23:07:39] 2025-12-17 22:07:39,855 [wrapper] ==== wrapper stderr END ====
[2025-12-17 23:07:39]  *** Error codes and diagnostics ***
[2025-12-17 23:07:39]     "exeErrorCode": 0,
[2025-12-17 23:07:39]     "exeErrorDiag": "",
[2025-12-17 23:07:39]     "pilotErrorCode": 0,
[2025-12-17 23:07:39]     "pilotErrorDiag": "",
[2025-12-17 23:07:39]  *** Listing of results directory ***
[2025-12-17 23:07:39] total 448552
[2025-12-17 23:07:39] -rwx------ 1 mf493845 unix-user     36322 Dec 17 02:08 runpilot2-wrapper.sh
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user      5112 Dec 17 02:10 queuedata.json
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user    579449 Dec 17 02:11 pilot3.tar.gz
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user       100 Dec 17 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 23:07:39] -rwxr-xr-x 1 mf493845 unix-user      7986 Dec 17 21:02 run_atlas
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user       105 Dec 17 21:02 job.xml
[2025-12-17 23:07:39] -rw-r--r-- 2 mf493845 unix-user     15847 Dec 17 22:00 start_atlas.sh
[2025-12-17 23:07:39] drwxrwx--x 2 mf493845 unix-user       100 Dec 17 22:00 shared
[2025-12-17 23:07:39] -rw-r--r-- 2 mf493845 unix-user    592399 Dec 17 22:00 input.tar.gz
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user      6391 Dec 17 22:00 init_data.xml
[2025-12-17 23:07:39] -rw-r--r-- 2 mf493845 unix-user 225271591 Dec 17 22:00 EVNT.47898761._000797.pool.root.1
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user         0 Dec 17 22:00 boinc_setup_complete
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user      8192 Dec 17 22:00 boinc_mmap_file
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user         0 Dec 17 22:00 boinc_lockfile
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user      2508 Dec 17 22:00 pandaJob.out
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user    988150 Dec 17 22:00 agis_schedconf.cvmfs.json
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user   1516240 Dec 17 22:00 agis_ddmendpoints.agis.ALL.json
[2025-12-17 23:07:39] drwx------ 5 mf493845 unix-user       440 Dec 17 22:00 pilot3
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user 228296783 Dec 17 23:06 HITS.47898763._020551.pool.root.1
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user      1014 Dec 17 23:06 memory_monitor_summary.json
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user    319412 Dec 17 23:07 log.47898763._020551.job.log.tgz.1
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user        95 Dec 17 23:07 pilot_heartbeat.json
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user      7760 Dec 17 23:07 heartbeat.json
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user       819 Dec 17 23:07 pilotlog.txt
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user    615399 Dec 17 23:07 log.47898763._020551.job.log.1
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user       357 Dec 17 23:07 output.list
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user       620 Dec 17 23:07 runtime_log
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user    952320 Dec 17 23:07 result.tar.gz
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user      9220 Dec 17 23:07 runtime_log.err
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user       641 Dec 17 23:07 iSJLDmKDvp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWAbKDmOnNBmn.diag
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user     22409 Dec 17 23:07 stderr.txt
[2025-12-17 23:07:39] HITS file was successfully produced:
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user 228296783 Dec 17 23:06 shared/HITS.pool.root.1
[2025-12-17 23:07:39]  *** Contents of shared directory: ***
[2025-12-17 23:07:39] total 444468
[2025-12-17 23:07:39] -rw-r--r-- 2 mf493845 unix-user     15847 Dec 17 22:00 start_atlas.sh
[2025-12-17 23:07:39] -rw-r--r-- 2 mf493845 unix-user    592399 Dec 17 22:00 input.tar.gz
[2025-12-17 23:07:39] -rw-r--r-- 2 mf493845 unix-user 225271591 Dec 17 22:00 ATLAS.root_0
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user 228296783 Dec 17 23:06 HITS.pool.root.1
[2025-12-17 23:07:39] -rw------- 1 mf493845 unix-user    952320 Dec 17 23:07 result.tar.gz
23:07:41 (4013): run_atlas exited; CPU time 29211.020550
23:07:41 (4013): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN