Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:01:23 (1948642): wrapper (7.7.26015): starting
20:01:23 (1948642): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 20:01:23] Arguments: --nthreads 12
[2025-12-17 20:01:23] Threads: 12
[2025-12-17 20:01:23] Checking for CVMFS
[2025-12-17 20:01:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 20:01:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 20:01:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 20:01:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 20:01:23] 2.11.0.0 1971323 3829 101800 154121 3 188 3816951 6144000 12050 130560 0 49029906 99.999 140966 183 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-12-17 20:01:23] CVMFS is ok
[2025-12-17 20:01:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 20:01:23] Checking for apptainer binary...
[2025-12-17 20:01:23] apptainer is not installed, using version from CVMFS
[2025-12-17 20:01:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 20:01:24] radiat0r
[2025-12-17 20:01:24] apptainer works
[2025-12-17 20:01:24] Set ATHENA_PROC_NUMBER=12
[2025-12-17 20:01:24] Set ATHENA_CORE_NUMBER=12
[2025-12-17 20:01:24] Starting ATLAS job with PandaID=6930649872
[2025-12-17 20:01:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 21:12:47]  *** The last 200 lines of the pilot log: ***
[2025-12-17 21:12:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-17 21:12:47]  replicas=None
[2025-12-17 21:12:47]  scope=mc23_13p6TeV
[2025-12-17 21:12:47]  status=None
[2025-12-17 21:12:47]  status_code=0
[2025-12-17 21:12:47]  storage_token=
[2025-12-17 21:12:47]  surl=/var/lib/boinc/slots/17/PanDA_Pilot-6930649872/log.47898836._003302.job.log.tgz.1
[2025-12-17 21:12:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/a7/log.47898836._003302.job.log.tgz.1
[2025-12-17 21:12:47]  workdir=None
[2025-12-17 21:12:47] ]
[2025-12-17 21:12:47] 2025-12-17 21:12:02,292 | INFO     | transferring file log.47898836._003302.job.log.tgz.1 from /var/lib/boinc/slots/17/PanDA_Pilot-6930649872/log.47898836._003302.job.log.tgz.1 to /var/lib/boinc/slots
[2025-12-17 21:12:47] 2025-12-17 21:12:02,292 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/17/PanDA_Pilot-6930649872/log.47898836._003302.job.log.tgz.1 /var/lib/boinc/slots/17/log.47898836._003302.j
[2025-12-17 21:12:47] 2025-12-17 21:12:02,318 | INFO     | adding to output.list: log.47898836._003302.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/a7/log.47898836._003302.job.log.tg
[2025-12-17 21:12:47] 2025-12-17 21:12:02,319 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 21:12:47] 2025-12-17 21:12:02,319 | INFO     | summary of transferred files:
[2025-12-17 21:12:47] 2025-12-17 21:12:02,320 | INFO     |  -- lfn=log.47898836._003302.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 21:12:47] 2025-12-17 21:12:02,320 | INFO     | stage-out finished correctly
[2025-12-17 21:12:47] 2025-12-17 21:12:02,415 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 21:12:47] 2025-12-17 21:12:03,842 | INFO     | job 6930649872 has state=finished
[2025-12-17 21:12:47] 2025-12-17 21:12:03,843 | INFO     | preparing for final server update for job 6930649872 in state='finished'
[2025-12-17 21:12:47] 2025-12-17 21:12:03,843 | INFO     | this job has now completed (state=finished)
[2025-12-17 21:12:47] 2025-12-17 21:12:03,844 | INFO     | monitor loop #293: job 0:6930649872 is in state 'finished'
[2025-12-17 21:12:47] 2025-12-17 21:12:03,844 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 21:12:47] 2025-12-17 21:12:03,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 21:12:47] 2025-12-17 21:12:03,844 | INFO     | log transfer has been attempted: DONE
[2025-12-17 21:12:47] 2025-12-17 21:12:03,845 | INFO     | job 6930649872 has finished - writing final server update
[2025-12-17 21:12:47] 2025-12-17 21:12:03,845 | INFO     | total number of processed events: 400 (read)
[2025-12-17 21:12:47] 2025-12-17 21:12:03,846 | INFO     | executing command: lscpu
[2025-12-17 21:12:47] 2025-12-17 21:12:04,006 | INFO     | time since job start (4229s) is within the limit (174528.0s)
[2025-12-17 21:12:47] 2025-12-17 21:12:04,056 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 21:12:47] 2025-12-17 21:12:05,834 | INFO     | PID=1955366 has CPU usage=24.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-17 21:12:47] 2025-12-17 21:12:05,834 | INFO     | .. there are 13 such processes running
[2025-12-17 21:12:47] 2025-12-17 21:12:06,347 | INFO     | monitor loop #294: job 0:6930649872 is in state 'finished'
[2025-12-17 21:12:47] 2025-12-17 21:12:06,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 21:12:47] 2025-12-17 21:12:06,835 | INFO     | time since job start (4231s) is within the limit (174528.0s)
[2025-12-17 21:12:47] 2025-12-17 21:12:08,841 | INFO     | time since job start (4233s) is within the limit (174528.0s)
[2025-12-17 21:12:47] 2025-12-17 21:12:08,851 | INFO     | monitor loop #295: job 0:6930649872 is in state 'finished'
[2025-12-17 21:12:47] 2025-12-17 21:12:08,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 21:12:47] 2025-12-17 21:12:10,340 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 21:12:47] 2025-12-17 21:12:10,402 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2412.1458554687483
[2025-12-17 21:12:47] 2025-12-17 21:12:10,488 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6930649872/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 21:12:47] 2025-12-17 21:12:10,489 | INFO     | extracted standard info from prmon json
[2025-12-17 21:12:47] 2025-12-17 21:12:10,489 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 21:12:47] 2025-12-17 21:12:10,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 21:12:47] 2025-12-17 21:12:10,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 21:12:47] 2025-12-17 21:12:10,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 21:12:47] 2025-12-17 21:12:10,491 | INFO     | fitting pss+swap vs Time
[2025-12-17 21:12:47] 2025-12-17 21:12:10,491 | INFO     | sum of square deviations: 73882315.5
[2025-12-17 21:12:47] 2025-12-17 21:12:10,492 | INFO     | sum of deviations: 915928969.0
[2025-12-17 21:12:47] 2025-12-17 21:12:10,492 | INFO     | mean x: 1766003892.5
[2025-12-17 21:12:47] 2025-12-17 21:12:10,492 | INFO     | mean y: 2657359.5483870967
[2025-12-17 21:12:47] 2025-12-17 21:12:10,492 | INFO     | intersect: -21890729624.343746
[2025-12-17 21:12:47] 2025-12-17 21:12:10,492 | INFO     | chi2: 0.0012620790856038644
[2025-12-17 21:12:47] 2025-12-17 21:12:10,492 | INFO     | current memory leak: 12.40 B/s (using 62 data points, chi2=0.00)
[2025-12-17 21:12:47] 2025-12-17 21:12:10,492 | INFO     | could have reported an average CPU frequency of 2385 MHz (6 samples)
[2025-12-17 21:12:47] 2025-12-17 21:12:10,493 | INFO     | ..............................
[2025-12-17 21:12:47] 2025-12-17 21:12:10,493 | INFO     | . Timing measurements:
[2025-12-17 21:12:47] 2025-12-17 21:12:10,493 | INFO     | . get job = 0 s
[2025-12-17 21:12:47] 2025-12-17 21:12:10,493 | INFO     | . initial setup = 1 s
[2025-12-17 21:12:47] 2025-12-17 21:12:10,493 | INFO     | . payload setup = 7 s
[2025-12-17 21:12:47] 2025-12-17 21:12:10,493 | INFO     | . stage-in = 0 s
[2025-12-17 21:12:47] 2025-12-17 21:12:10,493 | INFO     | . payload execution = 4196 s
[2025-12-17 21:12:47] 2025-12-17 21:12:10,493 | INFO     | . stage-out = 0 s
[2025-12-17 21:12:47] 2025-12-17 21:12:10,493 | INFO     | . log creation = 0 s
[2025-12-17 21:12:47] 2025-12-17 21:12:10,493 | INFO     | ..............................
[2025-12-17 21:12:47] 2025-12-17 21:12:10,582 | INFO     | 
[2025-12-17 21:12:47] 2025-12-17 21:12:10,582 | INFO     | job summary report
[2025-12-17 21:12:47] 2025-12-17 21:12:10,582 | INFO     | --------------------------------------------------
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | PanDA job id: 6930649872
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | task id: 47898836
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | errors: (none)
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | pilot state: finished 
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | transexitcode: 0
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | exeerrorcode: 0
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | exeerrordiag: 
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | exitcode: 0
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | exitmsg: OK
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | cpuconsumptiontime: 46117 s
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | nevents: 400
[2025-12-17 21:12:47] 2025-12-17 21:12:10,583 | INFO     | neventsw: 0
[2025-12-17 21:12:47] 2025-12-17 21:12:10,584 | INFO     | pid: 1964120
[2025-12-17 21:12:47] 2025-12-17 21:12:10,584 | INFO     | pgrp: 1964120
[2025-12-17 21:12:47] 2025-12-17 21:12:10,584 | INFO     | corecount: 12
[2025-12-17 21:12:47] 2025-12-17 21:12:10,584 | INFO     | event service: False
[2025-12-17 21:12:47] 2025-12-17 21:12:10,584 | INFO     | sizes: {0: 2283130, 1: 2283987, 7: 2284249, 12: 2284277, 4207: 2310532, 4209: 2319716, 4217: 2319854}
[2025-12-17 21:12:47] 2025-12-17 21:12:10,584 | INFO     | --------------------------------------------------
[2025-12-17 21:12:47] 2025-12-17 21:12:10,584 | INFO     | 
[2025-12-17 21:12:47] 2025-12-17 21:12:10,584 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-12-17 21:12:47] 2025-12-17 21:12:10,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,612 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,612 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 21:12:47] 2025-12-17 21:12:10,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,612 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 21:12:47] 2025-12-17 21:12:10,612 | INFO     | job 6930649872 has completed (purged errors)
[2025-12-17 21:12:47] 2025-12-17 21:12:10,612 | INFO     | overall cleanup function is called
[2025-12-17 21:12:47] 2025-12-17 21:12:11,619 | INFO     | --- collectZombieJob: --- 10, [1964120]
[2025-12-17 21:12:47] 2025-12-17 21:12:11,619 | INFO     | zombie collector waiting for pid 1964120
[2025-12-17 21:12:47] 2025-12-17 21:12:11,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 21:12:47] 2025-12-17 21:12:11,620 | INFO     | collected zombie processes
[2025-12-17 21:12:47] 2025-12-17 21:12:11,620 | INFO     | will attempt to kill all subprocesses of pid=1964120
[2025-12-17 21:12:47] 2025-12-17 21:12:12,172 | INFO     | process IDs to be killed: [1964120] (in reverse order)
[2025-12-17 21:12:47] 2025-12-17 21:12:12,408 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 21:12:47] 2025-12-17 21:12:12,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 21:12:47] 2025-12-17 21:12:12,438 | INFO     | did not find any defunct processes belonging to 1964120
[2025-12-17 21:12:47] 2025-12-17 21:12:12,463 | INFO     | did not find any defunct processes belonging to 1964120
[2025-12-17 21:12:47] 2025-12-17 21:12:12,463 | INFO     | ready for new job
[2025-12-17 21:12:47] 2025-12-17 21:12:12,463 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 21:12:47] 2025-12-17 21:12:12,465 | INFO     | ***************************************
[2025-12-17 21:12:47] 2025-12-17 21:12:12,465 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 21:12:47] 2025-12-17 21:12:12,466 | INFO     | ***************************************
[2025-12-17 21:12:47] 2025-12-17 21:12:12,466 | INFO     | 
[2025-12-17 21:12:47] 2025-12-17 21:12:12,505 | INFO     | architecture information:
[2025-12-17 21:12:47] 2025-12-17 21:12:12,505 | INFO     | executing command: cat /etc/os-release
[2025-12-17 21:12:47] 2025-12-17 21:12:12,529 | INFO     | cat /etc/os-release:
[2025-12-17 21:12:47] NAME="CentOS Linux"
[2025-12-17 21:12:47] VERSION="7 (Core)"
[2025-12-17 21:12:47] ID="centos"
[2025-12-17 21:12:47] ID_LIKE="rhel fedora"
[2025-12-17 21:12:47] VERSION_ID="7"
[2025-12-17 21:12:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 21:12:47] ANSI_COLOR="0;31"
[2025-12-17 21:12:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 21:12:47] HOME_URL="https://www.centos.org/"
[2025-12-17 21:12:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 21:12:47] 
[2025-12-17 21:12:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 21:12:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 21:12:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 21:12:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 21:12:47] 
[2025-12-17 21:12:47] 2025-12-17 21:12:12,529 | INFO     | ***************************************
[2025-12-17 21:12:47] 2025-12-17 21:12:13,032 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-12-17 21:12:47] 2025-12-17 21:12:13,057 | INFO     | sufficient remaining disk space (1707480186880 B)
[2025-12-17 21:12:47] 2025-12-17 21:12:13,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 21:12:47] 2025-12-17 21:12:13,057 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 21:12:47] 2025-12-17 21:12:13,057 | INFO     | update_server=False
[2025-12-17 21:12:47] 2025-12-17 21:12:13,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 21:12:47] 2025-12-17 21:12:13,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 21:12:47] 2025-12-17 21:12:13,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 21:12:47] 2025-12-17 21:12:13,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 21:12:47] 2025-12-17 21:12:13,059 | INFO     | aborting loop
[2025-12-17 21:12:47] 2025-12-17 21:12:13,145 | INFO     | all payload control threads have been joined
[2025-12-17 21:12:47] 2025-12-17 21:12:13,485 | INFO     | all data control threads have been joined
[2025-12-17 21:12:47] 2025-12-17 21:12:14,063 | INFO     | [job] job monitor thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:14,063 | INFO     | [job] retrieve thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:14,151 | INFO     | [payload] control thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:14,295 | INFO     | [job] validate thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:14,392 | INFO     | [data] copytool_in thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:14,434 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:14,491 | INFO     | [data] control thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:14,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:14,601 | INFO     | all job control threads have been joined
[2025-12-17 21:12:47] 2025-12-17 21:12:14,723 | INFO     | [payload] validate_post thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:14,790 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:14,939 | INFO     | [payload] failed_post thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:15,065 | INFO     | [data] copytool_out thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:15,316 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:15,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 21:12:47] 2025-12-17 21:12:15,603 | INFO     | [job] control thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:16,598 | INFO     | [job] queue monitor thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:17,064 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 21:12:47] 2025-12-17 21:12:42,127 | INFO     | [monitor] cgroup control has ended
[2025-12-17 21:12:47] 2025-12-17 21:12:42,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710751553344)>', '<ExcThread(monitor, started 140710040827648)>']
[2025-12-17 21:12:47] 2025-12-17 21:12:42,885 | INFO     | PID=1955366 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 21:12:47] 2025-12-17 21:12:42,885 | INFO     | .. there are 14 such processes running
[2025-12-17 21:12:47] 2025-12-17 21:12:42,886 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 21:12:47] 2025-12-17 21:12:42,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 21:12:47] 2025-12-17 21:12:42,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 21:12:47] 2025-12-17 21:12:42,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 21:12:47] 2025-12-17 21:12:42,886 | INFO     | [monitor] control thread has ended
[2025-12-17 21:12:47] 2025-12-17 21:12:47,271 | INFO     | all workflow threads have been joined
[2025-12-17 21:12:47] 2025-12-17 21:12:47,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 21:12:47] 2025-12-17 21:12:47,272 | INFO     | traces error code: 0
[2025-12-17 21:12:47] 2025-12-17 21:12:47,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 21:12:47] 2025-12-17 21:12:47,438 [wrapper] ==== pilot stdout END ====
[2025-12-17 21:12:47] 2025-12-17 21:12:47,441 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 21:12:47] 2025-12-17 21:12:47,444 [wrapper] pilotpid: 1955366
[2025-12-17 21:12:47] 2025-12-17 21:12:47,447 [wrapper] Pilot exit status: 0
[2025-12-17 21:12:47] 2025-12-17 21:12:47,461 [wrapper] pandaids: 6930649872
[2025-12-17 21:12:47] 2025-12-17 21:12:47,598 [wrapper] cleanup supervisor_pilot 2395287 1955367
[2025-12-17 21:12:47] 2025-12-17 21:12:47,602 [wrapper] Test setup, not cleaning
[2025-12-17 21:12:47] 2025-12-17 21:12:47,604 [wrapper] apfmon messages muted
[2025-12-17 21:12:47] 2025-12-17 21:12:47,606 [wrapper] ==== wrapper stdout END ====
[2025-12-17 21:12:47] 2025-12-17 21:12:47,609 [wrapper] ==== wrapper stderr END ====
[2025-12-17 21:12:47]  *** Error codes and diagnostics ***
[2025-12-17 21:12:47]     "exeErrorCode": 0,
[2025-12-17 21:12:47]     "exeErrorDiag": "",
[2025-12-17 21:12:47]     "pilotErrorCode": 0,
[2025-12-17 21:12:47]     "pilotErrorDiag": "",
[2025-12-17 21:12:47]  *** Listing of results directory ***
[2025-12-17 21:12:47] total 414568
[2025-12-17 21:12:47] -rwx------ 1 boinc boinc     36322 Dec 16 02:07 runpilot2-wrapper.sh
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc      5112 Dec 16 02:09 queuedata.json
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc    579449 Dec 16 02:09 pilot3.tar.gz
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc       100 Dec 17 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 21:12:47] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 20:01 run_atlas
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc       105 Dec 17 20:01 job.xml
[2025-12-17 21:12:47] -rw-r--r-- 2 boinc boinc     15847 Dec 17 20:01 start_atlas.sh
[2025-12-17 21:12:47] drwxrwx--x 2 boinc boinc      4096 Dec 17 20:01 shared
[2025-12-17 21:12:47] -rw-r--r-- 2 boinc boinc    592410 Dec 17 20:01 input.tar.gz
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc      9417 Dec 17 20:01 init_data.xml
[2025-12-17 21:12:47] -rw-r--r-- 2 boinc boinc 213374097 Dec 17 20:01 EVNT.47898833._000087.pool.root.1
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc         0 Dec 17 20:01 boinc_setup_complete
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc         0 Dec 17 20:01 boinc_lockfile
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc      2551 Dec 17 20:01 pandaJob.out
[2025-12-17 21:12:47] -rw------- 1 boinc boinc    988136 Dec 17 20:01 agis_schedconf.cvmfs.json
[2025-12-17 21:12:47] -rw------- 1 boinc boinc   1516240 Dec 17 20:01 agis_ddmendpoints.agis.ALL.json
[2025-12-17 21:12:47] drwx------ 5 boinc boinc      4096 Dec 17 20:01 pilot3
[2025-12-17 21:12:47] -rw------- 1 boinc boinc 205227855 Dec 17 21:11 HITS.47898836._003302.pool.root.1
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc       529 Dec 17 21:11 boinc_task_state.xml
[2025-12-17 21:12:47] -rw------- 1 boinc boinc      1030 Dec 17 21:11 memory_monitor_summary.json
[2025-12-17 21:12:47] -rw------- 1 boinc boinc    385524 Dec 17 21:12 log.47898836._003302.job.log.tgz.1
[2025-12-17 21:12:47] -rw------- 1 boinc boinc      7737 Dec 17 21:12 heartbeat.json
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc      8192 Dec 17 21:12 boinc_mmap_file
[2025-12-17 21:12:47] -rw------- 1 boinc boinc        95 Dec 17 21:12 pilot_heartbeat.json
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc        27 Dec 17 21:12 wrapper_checkpoint.txt
[2025-12-17 21:12:47] -rw------- 1 boinc boinc      4827 Dec 17 21:12 pilotlog.txt
[2025-12-17 21:12:47] -rw------- 1 boinc boinc    612414 Dec 17 21:12 log.47898836._003302.job.log.1
[2025-12-17 21:12:47] -rw------- 1 boinc boinc       357 Dec 17 21:12 output.list
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc       620 Dec 17 21:12 runtime_log
[2025-12-17 21:12:47] -rw------- 1 boinc boinc   1013760 Dec 17 21:12 result.tar.gz
[2025-12-17 21:12:47] -rw------- 1 boinc boinc       643 Dec 17 21:12 vn5LDmUeZp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtjUKDmCUJoEm.diag
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc      8788 Dec 17 21:12 runtime_log.err
[2025-12-17 21:12:47] -rw-r--r-- 1 boinc boinc     21730 Dec 17 21:12 stderr.txt
[2025-12-17 21:12:47] HITS file was successfully produced:
[2025-12-17 21:12:47] -rw------- 1 boinc boinc 205227855 Dec 17 21:11 shared/HITS.pool.root.1
[2025-12-17 21:12:47]  *** Contents of shared directory: ***
[2025-12-17 21:12:47] total 410392
[2025-12-17 21:12:47] -rw-r--r-- 2 boinc boinc     15847 Dec 17 20:01 start_atlas.sh
[2025-12-17 21:12:47] -rw-r--r-- 2 boinc boinc    592410 Dec 17 20:01 input.tar.gz
[2025-12-17 21:12:47] -rw-r--r-- 2 boinc boinc 213374097 Dec 17 20:01 ATLAS.root_0
[2025-12-17 21:12:47] -rw------- 1 boinc boinc 205227855 Dec 17 21:11 HITS.pool.root.1
[2025-12-17 21:12:47] -rw------- 1 boinc boinc   1013760 Dec 17 21:12 result.tar.gz
21:12:49 (1948642): run_atlas exited; CPU time 46390.053408
21:12:49 (1948642): called boinc_finish(0)

</stderr_txt>
]]>

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