Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:40:30 (4153930): wrapper (7.7.26015): starting
03:40:30 (4153930): wrapper: running run_atlas (--nthreads 3)
[2025-12-18 03:40:30] Arguments: --nthreads 3
[2025-12-18 03:40:30] Threads: 3
[2025-12-18 03:40:30] Checking for CVMFS
[2025-12-18 03:40:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 03:40:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 03:40:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 03:40:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 03:40:30] 2.9.2.0 2238870 7083 82816 154130 1 57 21468548 36864001 0 130560 0 5068081 99.990 252100 12988 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 03:40:30] CVMFS is ok
[2025-12-18 03:40:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 03:40:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 03:40:30] Further information can be found at the LHC@home message board.
[2025-12-18 03:40:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 03:40:30] Checking for apptainer binary...
[2025-12-18 03:40:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 03:40:30] Running /usr/bin/apptainer --version
[2025-12-18 03:40:30] apptainer version 1.4.1-1.1
[2025-12-18 03:40:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 03:40:30] magicA161a
[2025-12-18 03:40:30] apptainer works
[2025-12-18 03:40:30] Set ATHENA_PROC_NUMBER=3
[2025-12-18 03:40:30] Set ATHENA_CORE_NUMBER=3
[2025-12-18 03:40:30] Starting ATLAS job with PandaID=6930650189
[2025-12-18 03:40:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 05:31:11]  *** The last 200 lines of the pilot log: ***
[2025-12-18 05:31:11] 2025-12-18 04:30:42,174 | INFO     | [job] job monitor thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:42,534 | INFO     | [data] control thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:42,541 | INFO     | [job] validate thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:42,598 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:42,608 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:42,659 | INFO     | [data] copytool_out thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:42,888 | INFO     | [payload] failed_post thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:42,903 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:43,057 | INFO     | [job] control thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:43,067 | INFO     | [payload] control thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:43,473 | INFO     | [monitor] cgroup control has ended
[2025-12-18 05:31:11] 2025-12-18 04:30:44,842 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:51,356 | INFO     | job.realtimelogging is not enabled
[2025-12-18 05:31:11] 2025-12-18 04:30:52,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 05:31:11] 2025-12-18 04:30:52,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139987768801088)>', '<ExcThread(monitor, started 139986976356096)>']
[2025-12-18 05:31:11] 2025-12-18 04:30:57,401 | INFO     | all workflow threads have been joined
[2025-12-18 05:31:11] 2025-12-18 04:30:57,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 05:31:11] 2025-12-18 04:30:57,402 | INFO     | traces error code: 0
[2025-12-18 05:31:11] 2025-12-18 04:30:57,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 05:31:11] 2025-12-18 04:31:11,650 | INFO     | PID=4157655 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 05:31:11] 2025-12-18 04:31:11,650 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 05:31:11] 2025-12-18 04:31:11,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 05:31:11] 2025-12-18 04:31:11,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 05:31:11] 2025-12-18 04:31:11,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 05:31:11] 2025-12-18 04:31:11,650 | INFO     | [monitor] control thread has ended
[2025-12-18 05:31:11] 2025-12-18 04:31:11,695 [wrapper] ==== pilot stdout END ====
[2025-12-18 05:31:11] 2025-12-18 04:31:11,698 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 05:31:11] 2025-12-18 04:31:11,700 [wrapper] pilotpid: 4157655
[2025-12-18 05:31:11] 2025-12-18 04:31:11,702 [wrapper] Pilot exit status: 0
[2025-12-18 05:31:11] 2025-12-18 04:31:11,709 [wrapper] pandaids: 6930650189
[2025-12-18 05:31:11] 2025-12-18 04:31:11,725 [wrapper] cleanup supervisor_pilot 4178453 4157656
[2025-12-18 05:31:11] 2025-12-18 04:31:11,727 [wrapper] Test setup, not cleaning
[2025-12-18 05:31:11] 2025-12-18 04:31:11,730 [wrapper] apfmon messages muted
[2025-12-18 05:31:11] 2025-12-18 04:31:11,732 [wrapper] ==== wrapper stdout END ====
[2025-12-18 05:31:11] 2025-12-18 04:31:11,734 [wrapper] ==== wrapper stderr END ====
[2025-12-18 05:31:11]  *** Error codes and diagnostics ***
[2025-12-18 05:31:11]     "exeErrorCode": 0,
[2025-12-18 05:31:11]     "exeErrorDiag": "",
[2025-12-18 05:31:11]     "pilotErrorCode": 0,
[2025-12-18 05:31:11]     "pilotErrorDiag": "",
[2025-12-18 05:31:11]  *** Listing of results directory ***
[2025-12-18 05:31:11] total 419480
[2025-12-18 05:31:11] -rwx------ 1 boinc boinc     36322 Dec 16 03:07 runpilot2-wrapper.sh
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc      5112 Dec 16 03:09 queuedata.json
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc    579449 Dec 16 03:09 pilot3.tar.gz
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc       100 Dec 18 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 05:31:11] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 03:40 run_atlas
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc       105 Dec 18 03:40 job.xml
[2025-12-18 05:31:11] -rw-r--r-- 2 boinc boinc 216136611 Dec 18 03:40 EVNT.47898833._000133.pool.root.1
[2025-12-18 05:31:11] -rw-r--r-- 2 boinc boinc    592405 Dec 18 03:40 input.tar.gz
[2025-12-18 05:31:11] -rw-r--r-- 2 boinc boinc     15847 Dec 18 03:40 start_atlas.sh
[2025-12-18 05:31:11] drwxrwx--x 2 boinc boinc      4096 Dec 18 03:40 shared
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc         0 Dec 18 03:40 boinc_setup_complete
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc      6448 Dec 18 03:40 init_data.xml
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc         0 Dec 18 03:40 boinc_lockfile
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc      2552 Dec 18 03:40 pandaJob.out
[2025-12-18 05:31:11] -rw------- 1 boinc boinc    988110 Dec 18 03:40 agis_schedconf.cvmfs.json
[2025-12-18 05:31:11] -rw------- 1 boinc boinc   1516240 Dec 18 03:40 agis_ddmendpoints.agis.ALL.json
[2025-12-18 05:31:11] drwx------ 5 boinc boinc      4096 Dec 18 03:40 pilot3
[2025-12-18 05:31:11] -rw------- 1 boinc boinc 207057361 Dec 18 05:30 HITS.47898836._003379.pool.root.1
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc       529 Dec 18 05:30 boinc_task_state.xml
[2025-12-18 05:31:11] -rw------- 1 boinc boinc      1016 Dec 18 05:30 memory_monitor_summary.json
[2025-12-18 05:31:11] -rw------- 1 boinc boinc    272489 Dec 18 05:30 log.47898836._003379.job.log.tgz.1
[2025-12-18 05:31:11] -rw------- 1 boinc boinc      7753 Dec 18 05:30 heartbeat.json
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc      8192 Dec 18 05:31 boinc_mmap_file
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc        27 Dec 18 05:31 wrapper_checkpoint.txt
[2025-12-18 05:31:11] -rw------- 1 boinc boinc       747 Dec 18 05:31 pilotlog.txt
[2025-12-18 05:31:11] -rw------- 1 boinc boinc        95 Dec 18 05:31 pilot_heartbeat.json
[2025-12-18 05:31:11] -rw------- 1 boinc boinc    954733 Dec 18 05:31 log.47898836._003379.job.log.1
[2025-12-18 05:31:11] -rw------- 1 boinc boinc       357 Dec 18 05:31 output.list
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc       620 Dec 18 05:31 runtime_log
[2025-12-18 05:31:11] -rw------- 1 boinc boinc   1249280 Dec 18 05:31 result.tar.gz
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc      8917 Dec 18 05:31 runtime_log.err
[2025-12-18 05:31:11] -rw------- 1 boinc boinc       663 Dec 18 05:31 MLCNDmUeZp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSkUKDmRqw1Vm.diag
[2025-12-18 05:31:11] -rw-r--r-- 1 boinc boinc      6004 Dec 18 05:31 stderr.txt
[2025-12-18 05:31:11] HITS file was successfully produced:
[2025-12-18 05:31:11] -rw------- 1 boinc boinc 207057361 Dec 18 05:30 shared/HITS.pool.root.1
[2025-12-18 05:31:11]  *** Contents of shared directory: ***
[2025-12-18 05:31:11] total 415104
[2025-12-18 05:31:11] -rw-r--r-- 2 boinc boinc 216136611 Dec 18 03:40 ATLAS.root_0
[2025-12-18 05:31:11] -rw-r--r-- 2 boinc boinc    592405 Dec 18 03:40 input.tar.gz
[2025-12-18 05:31:11] -rw-r--r-- 2 boinc boinc     15847 Dec 18 03:40 start_atlas.sh
[2025-12-18 05:31:11] -rw------- 1 boinc boinc 207057361 Dec 18 05:30 HITS.pool.root.1
[2025-12-18 05:31:11] -rw------- 1 boinc boinc   1249280 Dec 18 05:31 result.tar.gz
05:31:13 (4153930): run_atlas exited; CPU time 19129.126852
05:31:13 (4153930): called boinc_finish(0)

</stderr_txt>
]]>

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