Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:26:53 (1170980): wrapper (7.7.26015): starting
07:26:53 (1170980): wrapper: running run_atlas (--nthreads 3)
[2025-12-18 07:26:53] Arguments: --nthreads 3
[2025-12-18 07:26:53] Threads: 3
[2025-12-18 07:26:53] Checking for CVMFS
[2025-12-18 07:26:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 07:26:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 07:26:53] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 07:26:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 07:26:54] 2.13.3.0 1045356 656 52180 154125 1 56 28351088 31457281 0 130560 0 384613 99.987 20595 13 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-12-18 07:26:54] CVMFS is ok
[2025-12-18 07:26:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 07:26:54] Checking for apptainer binary...
[2025-12-18 07:26:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 07:26:54] Running /usr/bin/apptainer --version
[2025-12-18 07:26:54] apptainer version 1.4.4-1.el9
[2025-12-18 07:26:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 07:26:54] testio001
[2025-12-18 07:26:54] apptainer works
[2025-12-18 07:26:54] Set ATHENA_PROC_NUMBER=3
[2025-12-18 07:26:54] Set ATHENA_CORE_NUMBER=3
[2025-12-18 07:26:54] Starting ATLAS job with PandaID=6932314837
[2025-12-18 07:26:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 09:37:30]  *** The last 200 lines of the pilot log: ***
[2025-12-18 09:37:30] 2025-12-18 00:36:55,691 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-18 09:37:30] 2025-12-18 00:36:55,691 | INFO     | log transfer has been attempted: DONE
[2025-12-18 09:37:30] 2025-12-18 00:36:55,691 | INFO     | job 6932314837 has finished - writing final server update
[2025-12-18 09:37:30] 2025-12-18 00:36:55,691 | INFO     | total number of processed events: 400 (read)
[2025-12-18 09:37:30] 2025-12-18 00:36:55,692 | INFO     | executing command: lscpu
[2025-12-18 09:37:30] 2025-12-18 00:36:55,703 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 09:37:30] 2025-12-18 00:36:56,800 | INFO     | monitor loop #558: job 0:6932314837 is in state 'finished'
[2025-12-18 09:37:30] 2025-12-18 00:36:56,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 09:37:30] 2025-12-18 00:36:56,951 | INFO     | time since job start (7791s) is within the limit (174528.0s)
[2025-12-18 09:37:30] 2025-12-18 00:36:58,398 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-18 09:37:30] 2025-12-18 00:36:58,398 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3674.4565000000002
[2025-12-18 09:37:30] 2025-12-18 00:36:58,399 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6932314837/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 09:37:30] 2025-12-18 00:36:58,399 | INFO     | extracted standard info from prmon json
[2025-12-18 09:37:30] 2025-12-18 00:36:58,400 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 09:37:30] 2025-12-18 00:36:58,400 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 09:37:30] 2025-12-18 00:36:58,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 09:37:30] 2025-12-18 00:36:58,400 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 09:37:30] 2025-12-18 00:36:58,401 | INFO     | fitting pss+swap vs Time
[2025-12-18 09:37:30] 2025-12-18 00:36:58,401 | INFO     | sum of square deviations: 650252192.0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,402 | INFO     | sum of deviations: -23134710916.0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,402 | INFO     | mean x: 1766014321.5
[2025-12-18 09:37:30] 2025-12-18 00:36:58,402 | INFO     | mean y: 2407717.3125
[2025-12-18 09:37:30] 2025-12-18 00:36:58,402 | INFO     | intersect: 62833769616.69443
[2025-12-18 09:37:30] 2025-12-18 00:36:58,402 | INFO     | chi2: 2.881928156260577
[2025-12-18 09:37:30] 2025-12-18 00:36:58,402 | INFO     | sum of square deviations: 576985702.0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,402 | INFO     | sum of deviations: -14039248576.0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,402 | INFO     | mean x: 1766014169.0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,402 | INFO     | mean y: 2426168.349593496
[2025-12-18 09:37:30] 2025-12-18 00:36:58,402 | INFO     | intersect: 42973182326.4096
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | chi2: 2.235242643348019
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | current chi2=2.235242643348019 (change=22.439334981606898 %)
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | right removable region: 122
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | sum of square deviations: 576985702.0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | sum of deviations: -46724330429.99999
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | mean x: 1766014474.0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | mean y: 2456276.113821138
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | intersect: 143014394945.15668
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | chi2: 0.9496805955617222
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | current chi2=0.9496805955617222 (change=67.04704128384752 %)
[2025-12-18 09:37:30] 2025-12-18 00:36:58,403 | INFO     | sum of square deviations: 509440249.5
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | sum of deviations: -42765427227.49999
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | mean x: 1766014626.5
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | mean y: 2447284.3474576273
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | intersect: 148252158740.0308
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | chi2: 0.9470763232439261
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | current chi2=0.9470763232439261 (change=0.27422612718076567 %)
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | left removable region: 20
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | sum of square deviations: 329031285.5
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | sum of deviations: -24163931433.5
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | mean x: 1766014748.5
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | mean y: 2444294.4215686275
[2025-12-18 09:37:30] 2025-12-18 00:36:58,404 | INFO     | intersect: 129697890210.6238
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | chi2: 0.24400268375392434
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | current memory leak: -73.44 B/s (using 102 data points, chi2=0.24)
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | could have reported an average CPU frequency of 3617 MHz (8 samples)
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | ..............................
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | . Timing measurements:
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | . get job = 0 s
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | . initial setup = 5 s
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | . payload setup = 4 s
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | . stage-in = 0 s
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | . payload execution = 7764 s
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | . stage-out = 0 s
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | . log creation = 0 s
[2025-12-18 09:37:30] 2025-12-18 00:36:58,405 | INFO     | ..............................
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | 
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | job summary report
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | --------------------------------------------------
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | PanDA job id: 6932314837
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | task id: 47886831
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | errors: (none)
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | pilot state: finished 
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | transexitcode: 0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | exeerrorcode: 0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | exeerrordiag: 
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | exitcode: 0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | exitmsg: OK
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | cpuconsumptiontime: 20547 s
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | nevents: 400
[2025-12-18 09:37:30] 2025-12-18 00:36:58,443 | INFO     | neventsw: 0
[2025-12-18 09:37:30] 2025-12-18 00:36:58,444 | INFO     | pid: 1181180
[2025-12-18 09:37:30] 2025-12-18 00:36:58,444 | INFO     | pgrp: 1181180
[2025-12-18 09:37:30] 2025-12-18 00:36:58,444 | INFO     | corecount: 3
[2025-12-18 09:37:30] 2025-12-18 00:36:58,444 | INFO     | event service: False
[2025-12-18 09:37:30] 2025-12-18 00:36:58,444 | INFO     | sizes: {0: 2283991, 3: 2284253, 11: 2284281, 7773: 2320905, 7776: 2320905, 7780: 2321099}
[2025-12-18 09:37:30] 2025-12-18 00:36:58,444 | INFO     | --------------------------------------------------
[2025-12-18 09:37:30] 2025-12-18 00:36:58,444 | INFO     | 
[2025-12-18 09:37:30] 2025-12-18 00:36:58,444 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-12-18 09:37:30] 2025-12-18 00:36:58,453 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,453 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,453 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | job 6932314837 has completed (purged errors)
[2025-12-18 09:37:30] 2025-12-18 00:36:58,454 | INFO     | overall cleanup function is called
[2025-12-18 09:37:30] 2025-12-18 00:36:59,460 | INFO     | --- collectZombieJob: --- 10, [1181180]
[2025-12-18 09:37:30] 2025-12-18 00:36:59,460 | INFO     | zombie collector waiting for pid 1181180
[2025-12-18 09:37:30] 2025-12-18 00:36:59,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 09:37:30] 2025-12-18 00:36:59,460 | INFO     | collected zombie processes
[2025-12-18 09:37:30] 2025-12-18 00:36:59,460 | INFO     | will attempt to kill all subprocesses of pid=1181180
[2025-12-18 09:37:30] 2025-12-18 00:36:59,493 | INFO     | process IDs to be killed: [1181180] (in reverse order)
[2025-12-18 09:37:30] 2025-12-18 00:36:59,511 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 09:37:30] 2025-12-18 00:36:59,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 09:37:30] 2025-12-18 00:36:59,512 | INFO     | did not find any defunct processes belonging to 1181180
[2025-12-18 09:37:30] 2025-12-18 00:36:59,513 | INFO     | did not find any defunct processes belonging to 1181180
[2025-12-18 09:37:30] 2025-12-18 00:36:59,514 | INFO     | ready for new job
[2025-12-18 09:37:30] 2025-12-18 00:36:59,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 09:37:30] 2025-12-18 00:36:59,515 | INFO     | ***************************************
[2025-12-18 09:37:30] 2025-12-18 00:36:59,515 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 09:37:30] 2025-12-18 00:36:59,515 | INFO     | ***************************************
[2025-12-18 09:37:30] 2025-12-18 00:36:59,515 | INFO     | 
[2025-12-18 09:37:30] 2025-12-18 00:36:59,515 | INFO     | architecture information:
[2025-12-18 09:37:30] 2025-12-18 00:36:59,515 | INFO     | executing command: cat /etc/os-release
[2025-12-18 09:37:30] 2025-12-18 00:36:59,522 | INFO     | cat /etc/os-release:
[2025-12-18 09:37:30] NAME="CentOS Linux"
[2025-12-18 09:37:30] VERSION="7 (Core)"
[2025-12-18 09:37:30] ID="centos"
[2025-12-18 09:37:30] ID_LIKE="rhel fedora"
[2025-12-18 09:37:30] VERSION_ID="7"
[2025-12-18 09:37:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 09:37:30] ANSI_COLOR="0;31"
[2025-12-18 09:37:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 09:37:30] HOME_URL="https://www.centos.org/"
[2025-12-18 09:37:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 09:37:30] 
[2025-12-18 09:37:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 09:37:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 09:37:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 09:37:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 09:37:30] 
[2025-12-18 09:37:30] 2025-12-18 00:36:59,522 | INFO     | ***************************************
[2025-12-18 09:37:30] 2025-12-18 00:37:00,025 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-12-18 09:37:30] 2025-12-18 00:37:00,034 | INFO     | sufficient remaining disk space (114844237824 B)
[2025-12-18 09:37:30] 2025-12-18 00:37:00,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 09:37:30] 2025-12-18 00:37:00,035 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 09:37:30] 2025-12-18 00:37:00,035 | INFO     | update_server=False
[2025-12-18 09:37:30] 2025-12-18 00:37:00,035 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 09:37:30] 2025-12-18 00:37:00,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 09:37:30] 2025-12-18 00:37:00,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 09:37:30] 2025-12-18 00:37:00,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 09:37:30] 2025-12-18 00:37:00,304 | INFO     | aborting loop
[2025-12-18 09:37:30] 2025-12-18 00:37:00,481 | INFO     | all data control threads have been joined
[2025-12-18 09:37:30] 2025-12-18 00:37:01,039 | INFO     | [job] queue monitor thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:01,039 | INFO     | [job] retrieve thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:01,168 | INFO     | all job control threads have been joined
[2025-12-18 09:37:30] 2025-12-18 00:37:01,187 | INFO     | [data] copytool_in thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:01,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 09:37:30] 2025-12-18 00:37:01,309 | INFO     | [job] job monitor thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:01,324 | INFO     | all payload control threads have been joined
[2025-12-18 09:37:30] 2025-12-18 00:37:01,486 | INFO     | [data] control thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:01,697 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:01,865 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:01,888 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:02,066 | INFO     | [job] validate thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:02,167 | INFO     | [data] copytool_out thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:02,173 | INFO     | [job] control thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:02,330 | INFO     | [payload] control thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:02,336 | INFO     | [payload] validate_post thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:02,612 | INFO     | [payload] failed_post thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:05,230 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:11,078 | INFO     | job.realtimelogging is not enabled
[2025-12-18 09:37:30] 2025-12-18 00:37:12,083 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 09:37:30] 2025-12-18 00:37:18,692 | INFO     | [monitor] cgroup control has ended
[2025-12-18 09:37:30] 2025-12-18 00:37:19,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129861543744)>', '<ExcThread(monitor, started 140129498797824)>']
[2025-12-18 09:37:30] 2025-12-18 00:37:24,677 | INFO     | all workflow threads have been joined
[2025-12-18 09:37:30] 2025-12-18 00:37:24,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 09:37:30] 2025-12-18 00:37:24,677 | INFO     | traces error code: 0
[2025-12-18 09:37:30] 2025-12-18 00:37:24,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 09:37:30] 2025-12-18 00:37:30,052 | INFO     | PID=1174649 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 09:37:30] 2025-12-18 00:37:30,052 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 09:37:30] 2025-12-18 00:37:30,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 09:37:30] 2025-12-18 00:37:30,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 09:37:30] 2025-12-18 00:37:30,052 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 09:37:30] 2025-12-18 00:37:30,052 | INFO     | [monitor] control thread has ended
[2025-12-18 09:37:30] 2025-12-18 00:37:30,116 [wrapper] ==== pilot stdout END ====
[2025-12-18 09:37:30] 2025-12-18 00:37:30,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 09:37:30] 2025-12-18 00:37:30,119 [wrapper] pilotpid: 1174649
[2025-12-18 09:37:30] 2025-12-18 00:37:30,120 [wrapper] Pilot exit status: 0
[2025-12-18 09:37:30] 2025-12-18 00:37:30,126 [wrapper] pandaids: 6932314837
[2025-12-18 09:37:30] 2025-12-18 00:37:30,137 [wrapper] cleanup supervisor_pilot 1195368 1174650
[2025-12-18 09:37:30] 2025-12-18 00:37:30,139 [wrapper] Test setup, not cleaning
[2025-12-18 09:37:30] 2025-12-18 00:37:30,140 [wrapper] apfmon messages muted
[2025-12-18 09:37:30] 2025-12-18 00:37:30,142 [wrapper] ==== wrapper stdout END ====
[2025-12-18 09:37:30] 2025-12-18 00:37:30,143 [wrapper] ==== wrapper stderr END ====
[2025-12-18 09:37:30]  *** Error codes and diagnostics ***
[2025-12-18 09:37:30]     "exeErrorCode": 0,
[2025-12-18 09:37:30]     "exeErrorDiag": "",
[2025-12-18 09:37:30]     "pilotErrorCode": 0,
[2025-12-18 09:37:30]     "pilotErrorDiag": "",
[2025-12-18 09:37:30]  *** Listing of results directory ***
[2025-12-18 09:37:30] total 342344
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc    579449 Dec 17 14:30 pilot3.tar.gz
[2025-12-18 09:37:30] -rwx------. 1 boinc boinc     36322 Dec 17 14:34 runpilot2-wrapper.sh
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc      5112 Dec 17 14:37 queuedata.json
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc       100 Dec 18 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 09:37:30] -rwxr-xr-x. 1 boinc boinc      7986 Dec 18 07:26 run_atlas
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc       105 Dec 18 07:26 job.xml
[2025-12-18 09:37:30] -rw-r--r--. 2 boinc boinc 191312033 Dec 18 07:26 EVNT.47886829._000643.pool.root.1
[2025-12-18 09:37:30] -rw-r--r--. 2 boinc boinc     15847 Dec 18 07:26 start_atlas.sh
[2025-12-18 09:37:30] drwxrwx--x. 2 boinc boinc        68 Dec 18 07:26 shared
[2025-12-18 09:37:30] -rw-r--r--. 2 boinc boinc    592411 Dec 18 07:26 input.tar.gz
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc         0 Dec 18 07:26 boinc_lockfile
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc      2538 Dec 18 07:26 pandaJob.out
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc    988134 Dec 18 07:27 agis_schedconf.cvmfs.json
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc   1516240 Dec 18 07:27 agis_ddmendpoints.agis.ALL.json
[2025-12-18 09:37:30] drwx------. 5 boinc boinc      4096 Dec 18 07:27 pilot3
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc      9318 Dec 18 08:08 init_data.xml
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc 152638771 Dec 18 09:36 HITS.47886831._017640.pool.root.1
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc       529 Dec 18 09:36 boinc_task_state.xml
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc      1016 Dec 18 09:36 memory_monitor_summary.json
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc        95 Dec 18 09:36 pilot_heartbeat.json
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc    276006 Dec 18 09:36 log.47886831._017640.job.log.tgz.1
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc      7763 Dec 18 09:36 heartbeat.json
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc        27 Dec 18 09:37 wrapper_checkpoint.txt
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc      8192 Dec 18 09:37 boinc_mmap_file
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc       747 Dec 18 09:37 pilotlog.txt
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc   1080599 Dec 18 09:37 log.47886831._017640.job.log.1
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc       357 Dec 18 09:37 output.list
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc       620 Dec 18 09:37 runtime_log
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc   1372160 Dec 18 09:37 result.tar.gz
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc      8775 Dec 18 09:37 runtime_log.err
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc       644 Dec 18 09:37 RTzLDmMMzp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJdbKDmitb3Sm.diag
[2025-12-18 09:37:30] -rw-r--r--. 1 boinc boinc     20969 Dec 18 09:37 stderr.txt
[2025-12-18 09:37:30] HITS file was successfully produced:
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc 152638771 Dec 18 09:36 shared/HITS.pool.root.1
[2025-12-18 09:37:30]  *** Contents of shared directory: ***
[2025-12-18 09:37:30] total 337832
[2025-12-18 09:37:30] -rw-r--r--. 2 boinc boinc 191312033 Dec 18 07:26 ATLAS.root_0
[2025-12-18 09:37:30] -rw-r--r--. 2 boinc boinc     15847 Dec 18 07:26 start_atlas.sh
[2025-12-18 09:37:30] -rw-r--r--. 2 boinc boinc    592411 Dec 18 07:26 input.tar.gz
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc 152638771 Dec 18 09:36 HITS.pool.root.1
[2025-12-18 09:37:30] -rw-------. 1 boinc boinc   1372160 Dec 18 09:37 result.tar.gz
09:37:31 (1170980): run_atlas exited; CPU time 20577.169071
09:37:31 (1170980): called boinc_finish(0)

</stderr_txt>
]]>

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