Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:40:58 (1620802): wrapper (7.7.26015): starting
13:40:58 (1620802): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 13:40:58] Arguments: --nthreads 8
[2025-12-17 13:40:58] Threads: 8
[2025-12-17 13:40:58] Checking for CVMFS
[2025-12-17 13:40:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 13:40:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 13:40:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 13:40:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 13:40:58] 2.13.2.0 2681929 9902 82912 154119 2 60 26337282 39288832 2833 16776704 0 21444434 99.997 297914 38356 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 13:40:58] CVMFS is ok
[2025-12-17 13:40:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 13:40:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 13:40:58] Further information can be found at the LHC@home message board.
[2025-12-17 13:40:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 13:40:58] Checking for apptainer binary...
[2025-12-17 13:40:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 13:40:58] Running /usr/bin/apptainer --version
[2025-12-17 13:40:58] apptainer version 1.4.5-2.el9
[2025-12-17 13:40:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 13:40:58] c-210-16.aglt2.org
[2025-12-17 13:40:58] apptainer works
[2025-12-17 13:40:58] Set ATHENA_PROC_NUMBER=8
[2025-12-17 13:40:58] Set ATHENA_CORE_NUMBER=8
[2025-12-17 13:40:58] Starting ATLAS job with PandaID=6932314476
[2025-12-17 13:40:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 15:30:25]  *** The last 200 lines of the pilot log: ***
[2025-12-17 15:30:26] 2025-12-17 20:29:53,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 15:30:26] 2025-12-17 20:29:53,953 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 15:30:26] 2025-12-17 20:29:53,959 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2740.11885
[2025-12-17 15:30:26] 2025-12-17 20:29:53,966 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6932314476/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 15:30:26] 2025-12-17 20:29:53,967 | INFO     | extracted standard info from prmon json
[2025-12-17 15:30:26] 2025-12-17 20:29:53,967 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 15:30:26] 2025-12-17 20:29:53,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 15:30:26] 2025-12-17 20:29:53,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 15:30:26] 2025-12-17 20:29:53,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 15:30:26] 2025-12-17 20:29:53,970 | INFO     | fitting pss+swap vs Time
[2025-12-17 15:30:26] 2025-12-17 20:29:53,970 | INFO     | sum of square deviations: 379832238.0
[2025-12-17 15:30:26] 2025-12-17 20:29:53,971 | INFO     | sum of deviations: 3472372417.999999
[2025-12-17 15:30:26] 2025-12-17 20:29:53,971 | INFO     | mean x: 1766000125.0
[2025-12-17 15:30:26] 2025-12-17 20:29:53,971 | INFO     | mean y: 2451496.6728971964
[2025-12-17 15:30:26] 2025-12-17 20:29:53,971 | INFO     | intersect: -16142071033.914806
[2025-12-17 15:30:26] 2025-12-17 20:29:53,972 | INFO     | chi2: 2.282592401132644
[2025-12-17 15:30:26] 2025-12-17 20:29:53,972 | INFO     | sum of square deviations: 329031285.5
[2025-12-17 15:30:26] 2025-12-17 20:29:53,973 | INFO     | sum of deviations: 10459379091.000004
[2025-12-17 15:30:26] 2025-12-17 20:29:53,973 | INFO     | mean x: 1765999972.5
[2025-12-17 15:30:26] 2025-12-17 20:29:53,973 | INFO     | mean y: 2471635.431372549
[2025-12-17 15:30:26] 2025-12-17 20:29:53,973 | INFO     | intersect: -56135847123.5399
[2025-12-17 15:30:26] 2025-12-17 20:29:53,973 | INFO     | chi2: 1.439996142384659
[2025-12-17 15:30:26] 2025-12-17 20:29:53,974 | INFO     | current chi2=1.439996142384659 (change=36.91400437195361 %)
[2025-12-17 15:30:26] 2025-12-17 20:29:53,974 | INFO     | sum of square deviations: 282974608.0
[2025-12-17 15:30:26] 2025-12-17 20:29:53,974 | INFO     | sum of deviations: 9973121190.0
[2025-12-17 15:30:26] 2025-12-17 20:29:53,975 | INFO     | mean x: 1765999820.0
[2025-12-17 15:30:26] 2025-12-17 20:29:53,975 | INFO     | mean y: 2470024.06185567
[2025-12-17 15:30:26] 2025-12-17 20:29:53,975 | INFO     | intersect: -62238203621.03844
[2025-12-17 15:30:26] 2025-12-17 20:29:53,975 | INFO     | chi2: 1.4432488431190869
[2025-12-17 15:30:26] 2025-12-17 20:29:53,975 | INFO     | current chi2=1.4432488431190869 (change=-0.22588260056317372 %)
[2025-12-17 15:30:26] 2025-12-17 20:29:53,975 | INFO     | right removable region: 96
[2025-12-17 15:30:26] 2025-12-17 20:29:53,976 | INFO     | sum of square deviations: 329031285.5
[2025-12-17 15:30:26] 2025-12-17 20:29:53,976 | INFO     | sum of deviations: -11622801652.0
[2025-12-17 15:30:26] 2025-12-17 20:29:53,976 | INFO     | mean x: 1766000277.5
[2025-12-17 15:30:26] 2025-12-17 20:29:53,976 | INFO     | mean y: 2495834.3725490198
[2025-12-17 15:30:26] 2025-12-17 20:29:53,976 | INFO     | intersect: 62385229171.01588
[2025-12-17 15:30:26] 2025-12-17 20:29:53,977 | INFO     | chi2: 0.9397099892150391
[2025-12-17 15:30:26] 2025-12-17 20:29:53,977 | INFO     | current chi2=0.9397099892150391 (change=58.831458969689635 %)
[2025-12-17 15:30:26] 2025-12-17 20:29:53,977 | INFO     | sum of square deviations: 282974608.0
[2025-12-17 15:30:26] 2025-12-17 20:29:53,978 | INFO     | sum of deviations: -11342266800.0
[2025-12-17 15:30:26] 2025-12-17 20:29:53,978 | INFO     | mean x: 1766000430.0
[2025-12-17 15:30:26] 2025-12-17 20:29:53,978 | INFO     | mean y: 2494721.6907216497
[2025-12-17 15:30:26] 2025-12-17 20:29:53,978 | INFO     | intersect: 70787814251.04837
[2025-12-17 15:30:26] 2025-12-17 20:29:53,978 | INFO     | chi2: 0.9245850437851386
[2025-12-17 15:30:26] 2025-12-17 20:29:53,978 | INFO     | current chi2=0.9245850437851386 (change=1.609533324481813 %)
[2025-12-17 15:30:26] 2025-12-17 20:29:53,979 | INFO     | left removable region: 20
[2025-12-17 15:30:26] 2025-12-17 20:29:53,979 | INFO     | sum of square deviations: 136095575.0
[2025-12-17 15:30:26] 2025-12-17 20:29:53,979 | INFO     | sum of deviations: -217617133.99999982
[2025-12-17 15:30:26] 2025-12-17 20:29:53,979 | INFO     | mean x: 1766000399.5
[2025-12-17 15:30:26] 2025-12-17 20:29:53,980 | INFO     | mean y: 2501184.3421052634
[2025-12-17 15:30:26] 2025-12-17 20:29:53,980 | INFO     | intersect: 2826339840.2428923
[2025-12-17 15:30:26] 2025-12-17 20:29:53,980 | INFO     | chi2: 0.01104641602946282
[2025-12-17 15:30:26] 2025-12-17 20:29:53,980 | INFO     | current memory leak: -1.60 B/s (using 76 data points, chi2=0.01)
[2025-12-17 15:30:26] 2025-12-17 20:29:53,980 | INFO     | could have reported an average CPU frequency of 2623 MHz (7 samples)
[2025-12-17 15:30:26] 2025-12-17 20:29:53,981 | INFO     | ..............................
[2025-12-17 15:30:26] 2025-12-17 20:29:53,981 | INFO     | . Timing measurements:
[2025-12-17 15:30:26] 2025-12-17 20:29:53,981 | INFO     | . get job = 0 s
[2025-12-17 15:30:26] 2025-12-17 20:29:53,981 | INFO     | . initial setup = 2 s
[2025-12-17 15:30:26] 2025-12-17 20:29:53,981 | INFO     | . payload setup = 4 s
[2025-12-17 15:30:26] 2025-12-17 20:29:53,981 | INFO     | . stage-in = 0 s
[2025-12-17 15:30:26] 2025-12-17 20:29:53,981 | INFO     | . payload execution = 6494 s
[2025-12-17 15:30:26] 2025-12-17 20:29:53,981 | INFO     | . stage-out = 0 s
[2025-12-17 15:30:26] 2025-12-17 20:29:53,982 | INFO     | . log creation = 0 s
[2025-12-17 15:30:26] 2025-12-17 20:29:53,982 | INFO     | ..............................
[2025-12-17 15:30:26] 2025-12-17 20:29:54,120 | INFO     | 
[2025-12-17 15:30:26] 2025-12-17 20:29:54,121 | INFO     | job summary report
[2025-12-17 15:30:26] 2025-12-17 20:29:54,121 | INFO     | --------------------------------------------------
[2025-12-17 15:30:26] 2025-12-17 20:29:54,121 | INFO     | PanDA job id: 6932314476
[2025-12-17 15:30:26] 2025-12-17 20:29:54,121 | INFO     | task id: 47886831
[2025-12-17 15:30:26] 2025-12-17 20:29:54,121 | INFO     | errors: (none)
[2025-12-17 15:30:26] 2025-12-17 20:29:54,121 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 15:30:26] 2025-12-17 20:29:54,121 | INFO     | pilot state: finished 
[2025-12-17 15:30:26] 2025-12-17 20:29:54,122 | INFO     | transexitcode: 0
[2025-12-17 15:30:26] 2025-12-17 20:29:54,122 | INFO     | exeerrorcode: 0
[2025-12-17 15:30:26] 2025-12-17 20:29:54,122 | INFO     | exeerrordiag: 
[2025-12-17 15:30:26] 2025-12-17 20:29:54,122 | INFO     | exitcode: 0
[2025-12-17 15:30:26] 2025-12-17 20:29:54,122 | INFO     | exitmsg: OK
[2025-12-17 15:30:26] 2025-12-17 20:29:54,122 | INFO     | cpuconsumptiontime: 47198 s
[2025-12-17 15:30:26] 2025-12-17 20:29:54,122 | INFO     | nevents: 400
[2025-12-17 15:30:26] 2025-12-17 20:29:54,122 | INFO     | neventsw: 0
[2025-12-17 15:30:26] 2025-12-17 20:29:54,122 | INFO     | pid: 1643531
[2025-12-17 15:30:26] 2025-12-17 20:29:54,123 | INFO     | pgrp: 1643531
[2025-12-17 15:30:26] 2025-12-17 20:29:54,123 | INFO     | corecount: 8
[2025-12-17 15:30:26] 2025-12-17 20:29:54,123 | INFO     | event service: False
[2025-12-17 15:30:26] 2025-12-17 20:29:54,123 | INFO     | sizes: {0: 2283766, 1: 2284021, 5: 2284283, 12: 2284339, 6502: 2311443, 6503: 2320441, 6506: 2320625, 6511: 2320819}
[2025-12-17 15:30:26] 2025-12-17 20:29:54,123 | INFO     | --------------------------------------------------
[2025-12-17 15:30:26] 2025-12-17 20:29:54,123 | INFO     | 
[2025-12-17 15:30:26] 2025-12-17 20:29:54,123 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-17 15:30:26] 2025-12-17 20:29:54,140 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,140 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,140 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,140 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,141 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,141 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,141 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,142 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 15:30:26] 2025-12-17 20:29:54,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,142 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 15:30:26] 2025-12-17 20:29:54,142 | INFO     | job 6932314476 has completed (purged errors)
[2025-12-17 15:30:26] 2025-12-17 20:29:54,142 | INFO     | overall cleanup function is called
[2025-12-17 15:30:26] 2025-12-17 20:29:55,150 | INFO     | --- collectZombieJob: --- 10, [1643531]
[2025-12-17 15:30:26] 2025-12-17 20:29:55,151 | INFO     | zombie collector waiting for pid 1643531
[2025-12-17 15:30:26] 2025-12-17 20:29:55,151 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 15:30:26] 2025-12-17 20:29:55,151 | INFO     | collected zombie processes
[2025-12-17 15:30:26] 2025-12-17 20:29:55,151 | INFO     | will attempt to kill all subprocesses of pid=1643531
[2025-12-17 15:30:26] 2025-12-17 20:29:55,378 | INFO     | process IDs to be killed: [1643531] (in reverse order)
[2025-12-17 15:30:26] 2025-12-17 20:29:55,438 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 15:30:26] 2025-12-17 20:29:55,439 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 15:30:26] 2025-12-17 20:29:55,445 | INFO     | did not find any defunct processes belonging to 1643531
[2025-12-17 15:30:26] 2025-12-17 20:29:55,450 | INFO     | did not find any defunct processes belonging to 1643531
[2025-12-17 15:30:26] 2025-12-17 20:29:55,450 | INFO     | ready for new job
[2025-12-17 15:30:26] 2025-12-17 20:29:55,450 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 15:30:26] 2025-12-17 20:29:55,452 | INFO     | ***************************************
[2025-12-17 15:30:26] 2025-12-17 20:29:55,452 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 15:30:26] 2025-12-17 20:29:55,452 | INFO     | ***************************************
[2025-12-17 15:30:26] 2025-12-17 20:29:55,452 | INFO     | 
[2025-12-17 15:30:26] 2025-12-17 20:29:55,454 | INFO     | architecture information:
[2025-12-17 15:30:26] 2025-12-17 20:29:55,455 | INFO     | executing command: cat /etc/os-release
[2025-12-17 15:30:26] 2025-12-17 20:29:55,466 | INFO     | cat /etc/os-release:
[2025-12-17 15:30:26] NAME="CentOS Linux"
[2025-12-17 15:30:26] VERSION="7 (Core)"
[2025-12-17 15:30:26] ID="centos"
[2025-12-17 15:30:26] ID_LIKE="rhel fedora"
[2025-12-17 15:30:26] VERSION_ID="7"
[2025-12-17 15:30:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 15:30:26] ANSI_COLOR="0;31"
[2025-12-17 15:30:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 15:30:26] HOME_URL="https://www.centos.org/"
[2025-12-17 15:30:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 15:30:26] 
[2025-12-17 15:30:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 15:30:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 15:30:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 15:30:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 15:30:26] 
[2025-12-17 15:30:26] 2025-12-17 20:29:55,466 | INFO     | ***************************************
[2025-12-17 15:30:26] 2025-12-17 20:29:55,969 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-17 15:30:26] 2025-12-17 20:29:55,982 | INFO     | sufficient remaining disk space (51624542208 B)
[2025-12-17 15:30:26] 2025-12-17 20:29:55,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 15:30:26] 2025-12-17 20:29:55,983 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 15:30:26] 2025-12-17 20:29:55,983 | INFO     | update_server=False
[2025-12-17 15:30:26] 2025-12-17 20:29:55,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 15:30:26] 2025-12-17 20:29:55,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 15:30:26] 2025-12-17 20:29:55,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 15:30:26] 2025-12-17 20:29:56,487 | INFO     | all payload control threads have been joined
[2025-12-17 15:30:26] 2025-12-17 20:29:56,563 | INFO     | all data control threads have been joined
[2025-12-17 15:30:26] 2025-12-17 20:29:56,611 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 15:30:26] 2025-12-17 20:29:56,612 | INFO     | aborting loop
[2025-12-17 15:30:26] 2025-12-17 20:29:56,988 | INFO     | [job] retrieve thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:56,989 | INFO     | [job] queue monitor thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:57,108 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:57,180 | INFO     | all job control threads have been joined
[2025-12-17 15:30:26] 2025-12-17 20:29:57,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 15:30:26] 2025-12-17 20:29:57,406 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:57,492 | INFO     | [payload] control thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:57,568 | INFO     | [data] control thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:57,586 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:57,617 | INFO     | [job] job monitor thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:57,754 | INFO     | [job] validate thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:57,913 | INFO     | [data] copytool_in thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:57,951 | INFO     | [payload] validate_post thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:58,186 | INFO     | [job] control thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:58,339 | INFO     | [payload] failed_post thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:59,255 | INFO     | [data] copytool_out thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:29:59,989 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:30:06,101 | INFO     | job.realtimelogging is not enabled
[2025-12-17 15:30:26] 2025-12-17 20:30:07,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 15:30:26] 2025-12-17 20:30:18,666 | INFO     | [monitor] cgroup control has ended
[2025-12-17 15:30:26] 2025-12-17 20:30:18,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258316371776)>', '<ExcThread(monitor, started 140257945163520)>']
[2025-12-17 15:30:26] 2025-12-17 20:30:23,916 | INFO     | all workflow threads have been joined
[2025-12-17 15:30:26] 2025-12-17 20:30:23,917 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 15:30:26] 2025-12-17 20:30:23,917 | INFO     | traces error code: 0
[2025-12-17 15:30:26] 2025-12-17 20:30:23,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 15:30:26] 2025-12-17 20:30:25,792 | INFO     | PID=1626531 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 15:30:26] 2025-12-17 20:30:25,792 | INFO     | .. there are 5 such processes running
[2025-12-17 15:30:26] 2025-12-17 20:30:25,793 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 15:30:26] 2025-12-17 20:30:25,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 15:30:26] 2025-12-17 20:30:25,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 15:30:26] 2025-12-17 20:30:25,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 15:30:26] 2025-12-17 20:30:25,794 | INFO     | [monitor] control thread has ended
[2025-12-17 15:30:26] 2025-12-17 20:30:25,888 [wrapper] ==== pilot stdout END ====
[2025-12-17 15:30:26] 2025-12-17 20:30:25,891 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 15:30:26] 2025-12-17 20:30:25,894 [wrapper] pilotpid: 1626531
[2025-12-17 15:30:26] 2025-12-17 20:30:25,896 [wrapper] Pilot exit status: 0
[2025-12-17 15:30:26] 2025-12-17 20:30:25,904 [wrapper] pandaids: 6932314476
[2025-12-17 15:30:26] 2025-12-17 20:30:25,943 [wrapper] cleanup supervisor_pilot 1814047 1626532
[2025-12-17 15:30:26] 2025-12-17 20:30:25,945 [wrapper] Test setup, not cleaning
[2025-12-17 15:30:26] 2025-12-17 20:30:25,947 [wrapper] apfmon messages muted
[2025-12-17 15:30:26] 2025-12-17 20:30:25,950 [wrapper] ==== wrapper stdout END ====
[2025-12-17 15:30:26] 2025-12-17 20:30:25,952 [wrapper] ==== wrapper stderr END ====
[2025-12-17 15:30:26]  *** Error codes and diagnostics ***
[2025-12-17 15:30:26]     "exeErrorCode": 0,
[2025-12-17 15:30:26]     "exeErrorDiag": "",
[2025-12-17 15:30:26]     "pilotErrorCode": 0,
[2025-12-17 15:30:26]     "pilotErrorDiag": "",
[2025-12-17 15:30:26]  *** Listing of results directory ***
[2025-12-17 15:30:26] total 340364
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 00:30 pilot3.tar.gz
[2025-12-17 15:30:26] -rwx------. 1 boincer umatlas     36322 Dec 17 00:33 runpilot2-wrapper.sh
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 00:35 queuedata.json
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas       100 Dec 17 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 15:30:26] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 13:40 run_atlas
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas       105 Dec 17 13:40 job.xml
[2025-12-17 15:30:26] -rw-r--r--. 2 boincer umatlas 191476362 Dec 17 13:40 EVNT.47886829._000633.pool.root.1
[2025-12-17 15:30:26] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 13:40 start_atlas.sh
[2025-12-17 15:30:26] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 13:40 shared
[2025-12-17 15:30:26] -rw-r--r--. 2 boincer umatlas    592416 Dec 17 13:40 input.tar.gz
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas         0 Dec 17 13:40 boinc_lockfile
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas      2539 Dec 17 13:40 pandaJob.out
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas        57 Dec 17 13:40 setup.sh.local
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas    988136 Dec 17 13:41 agis_schedconf.cvmfs.json
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas   1516240 Dec 17 13:41 agis_ddmendpoints.agis.ALL.json
[2025-12-17 15:30:26] drwx------. 5 boincer umatlas      4096 Dec 17 13:41 pilot3
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas      6663 Dec 17 15:28 init_data.xml
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas 150540523 Dec 17 15:29 HITS.47886831._017403.pool.root.1
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas       529 Dec 17 15:29 boinc_task_state.xml
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas      1033 Dec 17 15:29 memory_monitor_summary.json
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas    355872 Dec 17 15:29 log.47886831._017403.job.log.tgz.1
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas      7810 Dec 17 15:29 heartbeat.json
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas        27 Dec 17 15:30 wrapper_checkpoint.txt
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 15:30 boinc_mmap_file
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas        95 Dec 17 15:30 pilot_heartbeat.json
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas       822 Dec 17 15:30 pilotlog.txt
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas    944629 Dec 17 15:30 log.47886831._017403.job.log.1
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas       357 Dec 17 15:30 output.list
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas       620 Dec 17 15:30 runtime_log
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas   1320960 Dec 17 15:30 result.tar.gz
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas       651 Dec 17 15:30 SgpNDmNLzp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTYbKDmO2XTin.diag
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas      9342 Dec 17 15:30 runtime_log.err
[2025-12-17 15:30:26] -rw-r--r--. 1 boincer umatlas     21069 Dec 17 15:30 stderr.txt
[2025-12-17 15:30:26] HITS file was successfully produced:
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas 150540523 Dec 17 15:29 shared/HITS.pool.root.1
[2025-12-17 15:30:26]  *** Contents of shared directory: ***
[2025-12-17 15:30:26] total 335900
[2025-12-17 15:30:26] -rw-r--r--. 2 boincer umatlas 191476362 Dec 17 13:40 ATLAS.root_0
[2025-12-17 15:30:26] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 13:40 start_atlas.sh
[2025-12-17 15:30:26] -rw-r--r--. 2 boincer umatlas    592416 Dec 17 13:40 input.tar.gz
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas 150540523 Dec 17 15:29 HITS.pool.root.1
[2025-12-17 15:30:26] -rw-------. 1 boincer umatlas   1320960 Dec 17 15:30 result.tar.gz
15:30:27 (1620802): run_atlas exited; CPU time 47327.749432
15:30:27 (1620802): called boinc_finish(0)

</stderr_txt>
]]>

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